Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP11_F_G11
         (888 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z49886-6|CAI79131.1|  149|Caenorhabditis elegans Hypothetical pr...    28   7.8  
Z49886-5|CAA90055.1|  152|Caenorhabditis elegans Hypothetical pr...    28   7.8  
Z36753-10|CAA85341.1|  708|Caenorhabditis elegans Hypothetical p...    28   7.8  

>Z49886-6|CAI79131.1|  149|Caenorhabditis elegans Hypothetical
           protein C06A1.7 protein.
          Length = 149

 Score = 28.3 bits (60), Expect = 7.8
 Identities = 18/52 (34%), Positives = 21/52 (40%), Gaps = 1/52 (1%)
 Frame = -3

Query: 718 CX*RFRXYCCS*ANVCGSTW*IQTSI*SRC-TRCREAGWRCWCGLASCGSPG 566
           C  R R  CC     C +    +T   +RC T CR     C CG   CG  G
Sbjct: 69  CCCRPRCCCCCRPKCCCTC--CRTCCCTRCCTCCRPCCCGCGCGCGCCGCGG 118


>Z49886-5|CAA90055.1|  152|Caenorhabditis elegans Hypothetical
           protein C06A1.6 protein.
          Length = 152

 Score = 28.3 bits (60), Expect = 7.8
 Identities = 18/52 (34%), Positives = 21/52 (40%), Gaps = 1/52 (1%)
 Frame = -3

Query: 718 CX*RFRXYCCS*ANVCGSTW*IQTSI*SRC-TRCREAGWRCWCGLASCGSPG 566
           C  R R  CC     C +    +T   +RC T CR     C CG   CG  G
Sbjct: 72  CCCRPRCCCCCRPKCCCTC--CRTCCCTRCCTCCRPCCCGCGCGCGCCGCGG 121


>Z36753-10|CAA85341.1|  708|Caenorhabditis elegans Hypothetical
           protein T09A5.12 protein.
          Length = 708

 Score = 28.3 bits (60), Expect = 7.8
 Identities = 24/91 (26%), Positives = 45/91 (49%), Gaps = 2/91 (2%)
 Frame = +1

Query: 142 FAHNY*VLILHEIKYRRIKNCILEHTTEDMDLIKEMLQTLAE-HAVSYRAGQTTLRYIDR 318
           FA++  +L+ H      I+  +++ T  + ++++  L +L E HAV +     + ++  R
Sbjct: 327 FAYSRPLLLRHMYDSHGIEAPLVKRTFANREMLQSWLDSLRETHAVEFVVSSGSKKW-GR 385

Query: 319 ALWV-VEKCARWAVPPPLDQDERPQPELIRP 408
            L V    C+R       DQ ERP  + +RP
Sbjct: 386 GLQVHYLTCSRSG-----DQKERPNKKYVRP 411


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,658,277
Number of Sequences: 27780
Number of extensions: 374831
Number of successful extensions: 964
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 900
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 962
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2244863852
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)