Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP11_F_G07
(869 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF002196-4|AAB53979.1| 198|Caenorhabditis elegans Ribosomal pro... 213 1e-55
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 32 0.61
Z49131-3|CAA88976.1| 1211|Caenorhabditis elegans Hypothetical pr... 31 0.81
U67947-2|AAB07558.1| 204|Caenorhabditis elegans Hypothetical pr... 31 0.81
U41033-5|AAA82377.1| 675|Caenorhabditis elegans Hypothetical pr... 30 1.9
Z81104-7|CAB70253.2| 647|Caenorhabditis elegans Hypothetical pr... 29 3.3
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 29 3.3
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 29 3.3
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 29 3.3
U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical pr... 29 4.3
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 29 4.3
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 29 4.3
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 29 4.3
Z77652-12|CAI70406.1| 310|Caenorhabditis elegans Hypothetical p... 29 5.7
Z35604-5|CAA84680.2| 269|Caenorhabditis elegans Hypothetical pr... 29 5.7
AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical ... 29 5.7
AF098999-4|AAC68729.1| 659|Caenorhabditis elegans Hypothetical ... 29 5.7
U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog (hed... 28 10.0
>AF002196-4|AAB53979.1| 198|Caenorhabditis elegans Ribosomal
protein, large subunitprotein 19 protein.
Length = 198
Score = 213 bits (520), Expect = 1e-55
Identities = 95/158 (60%), Positives = 121/158 (76%)
Frame = +1
Query: 82 MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSR 261
MS+L+LQKRLA++V++CGK +VWLDPNE++EI+ NSRQ+IR+++ DGL+I+KPV VHSR
Sbjct: 1 MSNLRLQKRLASAVLKCGKHRVWLDPNEVSEISGANSRQSIRRLVNDGLIIRKPVTVHSR 60
Query: 262 ARVRKNTEARRKGRHCGFGKRRGTANARMPQKELWXXXXXXXXXXXXXXXTAKKIDRHLY 441
R R+ EARRKGRH G+GKRRGTANARMP+K LW AKK+D+HLY
Sbjct: 61 FRAREYEEARRKGRHTGYGKRRGTANARMPEKTLWIRRMRVLRNLLRRYRDAKKLDKHLY 120
Query: 442 HSLYMKAKGNVFKNKRVLMEYIHRKKAEKARTKMLXDQ 555
H LY++AKGN FKNK+ L+EYI +KK E R K L DQ
Sbjct: 121 HELYLRAKGNNFKNKKNLIEYIFKKKTENKRAKQLADQ 158
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 31.9 bits (69), Expect = 0.61
Identities = 13/33 (39%), Positives = 14/33 (42%)
Frame = +1
Query: 685 PXPXXPLHKPPPXXXPXPPXXPXXXXPXPGGSP 783
P P P+ PPP P PP P P P P
Sbjct: 31 PPPPPPMCAPPPLPCPPPPICPPQFCPPPPMCP 63
Score = 28.3 bits (60), Expect = 7.5
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = +1
Query: 712 PPPXXXPXPPXXPXXXXPXPGGSP 783
PPP P PP P P P SP
Sbjct: 63 PPPPPPPPPPMCPPPPPPMPSYSP 86
>Z49131-3|CAA88976.1| 1211|Caenorhabditis elegans Hypothetical protein
ZC373.4 protein.
Length = 1211
Score = 31.5 bits (68), Expect = 0.81
Identities = 14/45 (31%), Positives = 25/45 (55%)
Frame = +1
Query: 178 ANTNSRQNIRKMIKDGLVIKKPVAVHSRARVRKNTEARRKGRHCG 312
++T+S +N+R ++ D +K V H R ++E R+K R G
Sbjct: 1055 SDTSSSKNVRILLTDEQSVKSSVRSHPSVSTRDSSEERKKVRFAG 1099
>U67947-2|AAB07558.1| 204|Caenorhabditis elegans Hypothetical
protein H03E18.2 protein.
Length = 204
Score = 31.5 bits (68), Expect = 0.81
Identities = 15/51 (29%), Positives = 27/51 (52%)
Frame = -2
Query: 424 SSWQFCTSGAIFLKPFVFVPIVPSVAYAHWLYLFSYQSHSDDPFYVLLCFC 272
S + + T + LKP++ IV +++Y L+LF+ + F +L FC
Sbjct: 93 SYFSYSTHSSTSLKPYIAHHIVMAISYCFCLFLFAMFAWKQHFFVEILSFC 143
>U41033-5|AAA82377.1| 675|Caenorhabditis elegans Hypothetical
protein K09E3.1 protein.
Length = 675
Score = 30.3 bits (65), Expect = 1.9
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = +2
Query: 581 RRHASAARNVLPPXTRNCCRPSLXKTXPRLPLXT 682
RRHAS +PP NC +P+ +T + L T
Sbjct: 14 RRHASEGGTPIPPTPANCGKPTKKRTRGHVSLAT 47
>Z81104-7|CAB70253.2| 647|Caenorhabditis elegans Hypothetical
protein M199.3 protein.
Length = 647
Score = 29.5 bits (63), Expect = 3.3
Identities = 25/95 (26%), Positives = 38/95 (40%), Gaps = 4/95 (4%)
Frame = -2
Query: 451 RVSG--IDACQSSWQFCTSGAIFLKPFVFVPIVPSVAYAHWLYLFSYQSHSDDPFYVLLC 278
RV G +ACQS+ T + F F+ + +VAY W + SDD V+
Sbjct: 555 RVDGKRTEACQSTPD--TPNCMSQSGFTFINPMSTVAYPKWASSIGARDGSDDDCIVIKT 612
Query: 277 FCGHERGSVLLQVS**RDHP*SSYGC--SVWSWCL 179
G + + + + P +Y C W W L
Sbjct: 613 VSGKKSVATVQSCTTMTSLPAQAYMCGREAWVWNL 647
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 29.5 bits (63), Expect = 3.3
Identities = 14/39 (35%), Positives = 14/39 (35%)
Frame = +1
Query: 667 PTAXN*PXPXXPLHKPPPXXXPXPPXXPXXXXPXPGGSP 783
P P P P PP P PP P P GG P
Sbjct: 721 PITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPP 759
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 29.5 bits (63), Expect = 3.3
Identities = 14/39 (35%), Positives = 14/39 (35%)
Frame = +1
Query: 667 PTAXN*PXPXXPLHKPPPXXXPXPPXXPXXXXPXPGGSP 783
P P P P PP P PP P P GG P
Sbjct: 721 PITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPP 759
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 29.5 bits (63), Expect = 3.3
Identities = 14/39 (35%), Positives = 14/39 (35%)
Frame = +1
Query: 667 PTAXN*PXPXXPLHKPPPXXXPXPPXXPXXXXPXPGGSP 783
P P P P PP P PP P P GG P
Sbjct: 304 PITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPP 342
>U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical
protein C50F7.5 protein.
Length = 309
Score = 29.1 bits (62), Expect = 4.3
Identities = 14/48 (29%), Positives = 17/48 (35%)
Frame = +1
Query: 640 TFAXEDQXAPTAXN*PXPXXPLHKPPPXXXPXPPXXPXXXXPXPGGSP 783
T A D+ +P+ P P P P P P P P P P
Sbjct: 92 TVAPSDEPSPSGPPSPGPVNPSEDPQPSGPPSPGPVDPSEDPQPSVEP 139
Score = 28.7 bits (61), Expect = 5.7
Identities = 12/33 (36%), Positives = 13/33 (39%)
Frame = +1
Query: 685 PXPXXPLHKPPPXXXPXPPXXPXXXXPXPGGSP 783
P P P +P P P PP P P G P
Sbjct: 229 PGPVDPSDEPSPSDPPGPPGPPGPPTRRPPGPP 261
Score = 28.3 bits (60), Expect = 7.5
Identities = 14/39 (35%), Positives = 16/39 (41%)
Frame = +1
Query: 667 PTAXN*PXPXXPLHKPPPXXXPXPPXXPXXXXPXPGGSP 783
P+ + P P P PP P PP P P P G P
Sbjct: 238 PSPSDPPGPPGP-PGPPTRRPPGPPGPPTRRPPGPPGPP 275
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 29.1 bits (62), Expect = 4.3
Identities = 14/39 (35%), Positives = 15/39 (38%)
Frame = +1
Query: 667 PTAXN*PXPXXPLHKPPPXXXPXPPXXPXXXXPXPGGSP 783
P A + P P PPP P PP P GSP
Sbjct: 259 PAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSP 297
Score = 28.3 bits (60), Expect = 7.5
Identities = 14/35 (40%), Positives = 14/35 (40%), Gaps = 2/35 (5%)
Frame = +1
Query: 685 PXPXXPLHKPPPXXXPXPPXXPXXXXPXP--GGSP 783
P P PPP PP P P P GGSP
Sbjct: 255 PPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSP 289
Score = 27.9 bits (59), Expect = 10.0
Identities = 16/42 (38%), Positives = 17/42 (40%), Gaps = 2/42 (4%)
Frame = +1
Query: 664 APTAXN*PXPXXPLHKPPPXXXPXPPXXPXXXXPXP--GGSP 783
AP A + P P P PP PP P P P GSP
Sbjct: 231 APPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSP 272
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 29.1 bits (62), Expect = 4.3
Identities = 14/39 (35%), Positives = 15/39 (38%)
Frame = +1
Query: 667 PTAXN*PXPXXPLHKPPPXXXPXPPXXPXXXXPXPGGSP 783
P A + P P PPP P PP P GSP
Sbjct: 280 PAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSP 318
Score = 28.3 bits (60), Expect = 7.5
Identities = 14/35 (40%), Positives = 14/35 (40%), Gaps = 2/35 (5%)
Frame = +1
Query: 685 PXPXXPLHKPPPXXXPXPPXXPXXXXPXP--GGSP 783
P P PPP PP P P P GGSP
Sbjct: 276 PPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSP 310
Score = 27.9 bits (59), Expect = 10.0
Identities = 16/42 (38%), Positives = 17/42 (40%), Gaps = 2/42 (4%)
Frame = +1
Query: 664 APTAXN*PXPXXPLHKPPPXXXPXPPXXPXXXXPXP--GGSP 783
AP A + P P P PP PP P P P GSP
Sbjct: 252 APPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSP 293
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 29.1 bits (62), Expect = 4.3
Identities = 14/39 (35%), Positives = 15/39 (38%)
Frame = +1
Query: 667 PTAXN*PXPXXPLHKPPPXXXPXPPXXPXXXXPXPGGSP 783
P A + P P PPP P PP P GSP
Sbjct: 265 PAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSP 303
Score = 28.3 bits (60), Expect = 7.5
Identities = 14/35 (40%), Positives = 14/35 (40%), Gaps = 2/35 (5%)
Frame = +1
Query: 685 PXPXXPLHKPPPXXXPXPPXXPXXXXPXP--GGSP 783
P P PPP PP P P P GGSP
Sbjct: 261 PPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSP 295
Score = 27.9 bits (59), Expect = 10.0
Identities = 16/42 (38%), Positives = 17/42 (40%), Gaps = 2/42 (4%)
Frame = +1
Query: 664 APTAXN*PXPXXPLHKPPPXXXPXPPXXPXXXXPXP--GGSP 783
AP A + P P P PP PP P P P GSP
Sbjct: 237 APPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSP 278
>Z77652-12|CAI70406.1| 310|Caenorhabditis elegans Hypothetical
protein C06B3.14 protein.
Length = 310
Score = 28.7 bits (61), Expect = 5.7
Identities = 17/54 (31%), Positives = 23/54 (42%), Gaps = 1/54 (1%)
Frame = -2
Query: 418 WQFCTSGAIFLKPFVFVPIVPSVAYAHWLYLFSYQSHSD-DPFYVLLCFCGHER 260
W +C A+FL F+P A + Y F Y S D D + L F + R
Sbjct: 126 WLYCLGLAMFLLILFFIPFFGGCADNYSFYDFDYTSECDPDDHPITLMFDEYAR 179
>Z35604-5|CAA84680.2| 269|Caenorhabditis elegans Hypothetical
protein ZK1058.5 protein.
Length = 269
Score = 28.7 bits (61), Expect = 5.7
Identities = 15/39 (38%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Frame = +1
Query: 190 SRQNIRKMIK-DGLVIKKPVAVHSRARVRKNTEARRKGR 303
S +N+RKMIK G V+ + ++ A +R EAR R
Sbjct: 170 SAENVRKMIKIGGSVVVRDYGINDHAMIRFGREARISDR 208
>AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical
protein Y63D3A.5 protein.
Length = 486
Score = 28.7 bits (61), Expect = 5.7
Identities = 15/44 (34%), Positives = 17/44 (38%), Gaps = 1/44 (2%)
Frame = +1
Query: 658 QXAPTAXN*PXPXXP-LHKPPPXXXPXPPXXPXXXXPXPGGSPF 786
Q P P P P + PPP P P PGG+PF
Sbjct: 427 QGGPGGFGPPPPGGPGAYGPPPTGFPPVGAPPPGAAGAPGGNPF 470
>AF098999-4|AAC68729.1| 659|Caenorhabditis elegans Hypothetical
protein W04C9.6 protein.
Length = 659
Score = 28.7 bits (61), Expect = 5.7
Identities = 15/46 (32%), Positives = 26/46 (56%)
Frame = -3
Query: 297 LSTCFCVFADTSAGVYCYRFLDDETILDHLTDVLSGVGVCDLIDFI 160
++T FC+FAD S + R DD+ ++ + SG + D+I F+
Sbjct: 435 VNTIFCLFADASPAKWT-RLQDDDVAIEEEKEEYSG-SIEDIIKFL 478
>U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog
(hedgehog-like family)protein 7 protein.
Length = 401
Score = 27.9 bits (59), Expect = 10.0
Identities = 10/22 (45%), Positives = 11/22 (50%)
Frame = +1
Query: 685 PXPXXPLHKPPPXXXPXPPXXP 750
P P P + PPP P PP P
Sbjct: 134 PPPPPPHYPPPPPHYPPPPPAP 155
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,177,344
Number of Sequences: 27780
Number of extensions: 354435
Number of successful extensions: 1299
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 982
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1226
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2181923744
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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