Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP11_F_G04
(860 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyce... 31 0.16
SPBC56F2.04 |utp20||U3 snoRNP protein Utp20|Schizosaccharomyces ... 29 0.85
SPBC21B10.06c |||sequence orphan|Schizosaccharomyces pombe|chr 2... 28 1.5
SPAC6G9.08 |ubp6||ubiquitin C-terminal hydrolase Ubp6|Schizosacc... 28 1.5
SPAC3C7.01c ||SPAC732.03c|inositol polyphosphate phosphatase |Sc... 28 1.5
SPBC32H8.13c |mok12||alpha-1,3-glucan synthase Mok12|Schizosacch... 27 3.4
SPCC1919.10c |myo52||myosin type V|Schizosaccharomyces pombe|chr... 27 4.5
SPBC36B7.05c |||phosphatidylinositol|Schizosaccharomyces pombe|c... 26 6.0
SPAC26F1.08c |||conserved protein|Schizosaccharomyces pombe|chr ... 26 7.9
SPCC1450.10c |||iron hydrogenase large subunit |Schizosaccharomy... 26 7.9
SPCC622.14 |||GTPase activating protein |Schizosaccharomyces pom... 26 7.9
>SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1957
Score = 31.5 bits (68), Expect = 0.16
Identities = 28/104 (26%), Positives = 55/104 (52%), Gaps = 1/104 (0%)
Frame = +2
Query: 74 ESQHFSLSHFIFKMCS-LDKVSSPKFKNISSNAKQSPVQIKERLRKNYRNKVQKCRGTLQ 250
ES + SL F++ S ++K+ + + + S + IK +L++ + K+Q T+Q
Sbjct: 1463 ESINSSLDDKSFELASAVEKLGA--LQKLHSESLSLMENIKSQLQEA-KEKIQVDESTIQ 1519
Query: 251 DKFRELTFEKDNMCNVLKELYKEMIDFSEDILEIEDNILQEIKN 382
+ E+T K+N L + + D SE+I ++ +N+L E K+
Sbjct: 1520 ELDHEITASKNNYEGKLNDKDSIIRDLSENIEQL-NNLLAEEKS 1562
>SPBC56F2.04 |utp20||U3 snoRNP protein Utp20|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 2493
Score = 29.1 bits (62), Expect = 0.85
Identities = 15/55 (27%), Positives = 30/55 (54%)
Frame = -3
Query: 744 FKFLIYKIYVISLHVSQIKYIWQSLVSLITVNCGSDIQTELCLSKHLKICSLTSD 580
F + I ++ ++S I +W SL+ +I+ + GSD + CL K+ ++S+
Sbjct: 449 FVYCIERLQIVSPSYEDIISLWSSLMIIISSSLGSDEIYKACLLFLRKLEDVSSE 503
>SPBC21B10.06c |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 470
Score = 28.3 bits (60), Expect = 1.5
Identities = 15/51 (29%), Positives = 26/51 (50%)
Frame = +3
Query: 9 LITTHYREFLKILTLKYPYF*LNRNISHCLILFLKCVR*TKSLHLNLKIFH 161
+ + HY +F+KI+ L Y F I HC F++ + SL+ + + H
Sbjct: 132 MASLHYLKFVKIIALSYICFSSLIRICHCWTYFIR-IMGLSSLNKFVNLLH 181
>SPAC6G9.08 |ubp6||ubiquitin C-terminal hydrolase
Ubp6|Schizosaccharomyces pombe|chr 1|||Manual
Length = 467
Score = 28.3 bits (60), Expect = 1.5
Identities = 21/89 (23%), Positives = 37/89 (41%)
Frame = +2
Query: 425 QKTHMDDNIDWSKIEQDNVIVCPICQRDXFMSVNSCLKCPSCNVQIKTSMQTSEVKEHIF 604
QK + K +++ V P D F+S+ C++ + TS T + E +
Sbjct: 206 QKNMAGKLLSTMKCDENEVQEQPSISHDTFLSL-------PCHISMHTSYMTQGILEGLT 258
Query: 605 KCLDKHNSVCISDPQFTVIKDTSDCHIYL 691
+ + KH+ V D ++ I S YL
Sbjct: 259 QKISKHSDVLNRDAMYSKISRISRLPNYL 287
>SPAC3C7.01c ||SPAC732.03c|inositol polyphosphate phosphatase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 611
Score = 28.3 bits (60), Expect = 1.5
Identities = 15/49 (30%), Positives = 24/49 (48%)
Frame = +2
Query: 566 TSMQTSEVKEHIFKCLDKHNSVCISDPQFTVIKDTSDCHIYLICETCNE 712
T+MQT+ V+ + CLD+ N + S QF + D + E+ E
Sbjct: 376 TAMQTNFVRTNCMDCLDRTNVIQTSIAQFILNMQLHDIGVLSSSESLEE 424
>SPBC32H8.13c |mok12||alpha-1,3-glucan synthase
Mok12|Schizosaccharomyces pombe|chr 2|||Manual
Length = 2352
Score = 27.1 bits (57), Expect = 3.4
Identities = 17/50 (34%), Positives = 26/50 (52%), Gaps = 4/50 (8%)
Frame = -1
Query: 314 YIVPLIHYTYYPFQKLIREIYLAAFHG---IFVPCF-YSSCGASLLFVQA 177
++VP+I YPF KL E +A G V C+ Y S + +F+Q+
Sbjct: 1211 WVVPIISGVEYPFDKLCTEPKIAVKIGDDEFVVNCYSYKSGNITYVFLQS 1260
>SPCC1919.10c |myo52||myosin type V|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1516
Score = 26.6 bits (56), Expect = 4.5
Identities = 10/43 (23%), Positives = 26/43 (60%)
Frame = +2
Query: 254 KFRELTFEKDNMCNVLKELYKEMIDFSEDILEIEDNILQEIKN 382
+ +EL EK+N +++E +++ D + ++L + + ++KN
Sbjct: 989 ELKELLEEKENALIMMEEEMRQVNDANTELLRVNATLKSQLKN 1031
>SPBC36B7.05c |||phosphatidylinositol|Schizosaccharomyces pombe|chr
2|||Manual
Length = 279
Score = 26.2 bits (55), Expect = 6.0
Identities = 9/32 (28%), Positives = 17/32 (53%)
Frame = +2
Query: 533 LKCPSCNVQIKTSMQTSEVKEHIFKCLDKHNS 628
++CP C + + SE + H+ CL ++S
Sbjct: 168 VECPVCYAPLSSFKTLSERESHVANCLSNNSS 199
>SPAC26F1.08c |||conserved protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 977
Score = 25.8 bits (54), Expect = 7.9
Identities = 10/33 (30%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
Frame = -1
Query: 359 CLQFLKYPLRNL-SFPYIVPLIHYTYYPFQKLI 264
CL ++ R + SFP+++ H +YP Q +
Sbjct: 40 CLVLIRPLARKIGSFPFLILTFHTLFYPIQNTV 72
>SPCC1450.10c |||iron hydrogenase large subunit |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 538
Score = 25.8 bits (54), Expect = 7.9
Identities = 10/38 (26%), Positives = 18/38 (47%)
Frame = +2
Query: 515 MSVNSCLKCPSCNVQIKTSMQTSEVKEHIFKCLDKHNS 628
+S+N CL C C +T + + + + K L+ S
Sbjct: 59 ISLNDCLACSGCITSAETVLVNLQSYQEVLKHLESRKS 96
>SPCC622.14 |||GTPase activating protein |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 309
Score = 25.8 bits (54), Expect = 7.9
Identities = 14/32 (43%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
Frame = +2
Query: 152 NISSNAKQSPVQIKERLRKN-YRNKVQKCRGT 244
N+ AKQS Q+K L +N Y Q RGT
Sbjct: 248 NVQEGAKQSFTQLKSFLDENVYSENPQNTRGT 279
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,859,751
Number of Sequences: 5004
Number of extensions: 56347
Number of successful extensions: 222
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 218
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 222
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 428468660
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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