Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP11_F_G03
(863 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_06_0824 - 32243495-32244319,32244449-32244859 53 3e-07
01_01_1152 + 9170628-9171899 43 4e-04
11_01_0767 + 6438648-6438809,6439146-6440000 39 0.004
11_02_0012 - 7346282-7347136,7347234-7347593 38 0.008
03_05_0293 + 22849103-22849513,22849670-22849756,22850156-228502... 38 0.008
11_01_0771 + 6453130-6454488 37 0.024
03_05_0296 + 22866280-22866282,22867178-22867444,22868363-22868869 36 0.032
11_02_0014 - 7352619-7352918,7353173-7353418 35 0.073
11_02_0011 - 7337618-7338496,7338596-7338991 35 0.096
08_01_0906 + 8933230-8933797,8933894-8934543,8937956-8938615,893... 29 3.6
12_01_0053 - 438527-438670,439038-439247,439401-439530,439672-43... 29 6.3
>01_06_0824 - 32243495-32244319,32244449-32244859
Length = 411
Score = 53.2 bits (122), Expect = 3e-07
Identities = 31/90 (34%), Positives = 48/90 (53%), Gaps = 1/90 (1%)
Frame = +2
Query: 395 GVELKMANKVYVHDGGKLDENFAVVSRXVFNSDVQNIDF-SKNTVAAKSINDXVEENTNN 571
G +++ AN V+V +L +A V + ++ + + F K A + IN+ E T
Sbjct: 96 GPKVRFANGVWVDAALRLKAAYARVVADKYRAEARPVSFRDKLEEARREINEWFESATAG 155
Query: 572 RIKDLVNPDSLXSATAAVLXNAIYFKXSXE 661
RIKD + D++ AT AVL NA+YFK E
Sbjct: 156 RIKDFLPKDAVDRATPAVLGNALYFKGDWE 185
>01_01_1152 + 9170628-9171899
Length = 423
Score = 42.7 bits (96), Expect = 4e-04
Identities = 24/77 (31%), Positives = 41/77 (53%), Gaps = 1/77 (1%)
Frame = +2
Query: 422 VYVHDGGKLDENFAVVSRXVFNSDVQNIDFSKNTVAAKS-INDXVEENTNNRIKDLVNPD 598
V+V G L FA + + + + DF+ A+ +N V + T I+D++ P+
Sbjct: 123 VWVDRGRALTPEFADAAASRYAAVAEPADFATQPEQARERVNAFVSDATEGLIRDVLPPN 182
Query: 599 SLXSATAAVLXNAIYFK 649
S+ S+T VL NA++FK
Sbjct: 183 SVDSSTVVVLANAVHFK 199
>11_01_0767 + 6438648-6438809,6439146-6440000
Length = 338
Score = 39.1 bits (87), Expect = 0.004
Identities = 21/57 (36%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Frame = +2
Query: 482 FNSDVQNIDFSKNTVAA-KSINDXVEENTNNRIKDLVNPDSLXSATAAVLXNAIYFK 649
+ +DF + V A K IN V T N I +++ P+S T V+ NAIYFK
Sbjct: 42 YKGAASTVDFKNHPVEARKEINAWVARATKNLITEVIKPESQSVDTRHVVGNAIYFK 98
>11_02_0012 - 7346282-7347136,7347234-7347593
Length = 404
Score = 38.3 bits (85), Expect = 0.008
Identities = 20/49 (40%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Frame = +2
Query: 506 DFSKNTVAA-KSINDXVEENTNNRIKDLVNPDSLXSATAAVLXNAIYFK 649
DF + ++ K IN V + TN I++++ S+ TA VL NAIYFK
Sbjct: 116 DFQRQPKSSRKKINKWVSKATNKLIREILPDGSVHGGTALVLVNAIYFK 164
>03_05_0293 +
22849103-22849513,22849670-22849756,22850156-22850284,
22850507-22851262,22853474-22854250
Length = 719
Score = 38.3 bits (85), Expect = 0.008
Identities = 18/45 (40%), Positives = 26/45 (57%)
Frame = +2
Query: 515 KNTVAAKSINDXVEENTNNRIKDLVNPDSLXSATAAVLXNAIYFK 649
K A +N VE+ T+ IK+++ P S+ T VL NA+YFK
Sbjct: 209 KAAEVASQVNSWVEKVTSGLIKEILPPGSVDHTTRLVLGNALYFK 253
Score = 33.9 bits (74), Expect = 0.17
Identities = 15/37 (40%), Positives = 22/37 (59%)
Frame = +2
Query: 539 INDXVEENTNNRIKDLVNPDSLXSATAAVLXNAIYFK 649
+N V+ T+ IK++ P S+ T VL NA+YFK
Sbjct: 469 VNSWVDRVTSGLIKNIATPRSINHNTKLVLANALYFK 505
>11_01_0771 + 6453130-6454488
Length = 452
Score = 36.7 bits (81), Expect = 0.024
Identities = 22/68 (32%), Positives = 32/68 (47%)
Frame = +2
Query: 446 LDENFAVVSRXVFNSDVQNIDFSKNTVAAKSINDXVEENTNNRIKDLVNPDSLXSATAAV 625
+D ++ + + V ++ K A K IN T I D++ P S+ TA V
Sbjct: 146 IDAFILLLDPSMIDQCVLDLVSEKAEEARKQINAWARRATGKLITDVLPPRSVGPETAVV 205
Query: 626 LXNAIYFK 649
L NAIYFK
Sbjct: 206 LGNAIYFK 213
>03_05_0296 + 22866280-22866282,22867178-22867444,22868363-22868869
Length = 258
Score = 36.3 bits (80), Expect = 0.032
Identities = 16/40 (40%), Positives = 24/40 (60%)
Frame = +2
Query: 530 AKSINDXVEENTNNRIKDLVNPDSLXSATAAVLXNAIYFK 649
A +N V+ T+ IK+++ P S+ T VL NA+YFK
Sbjct: 6 ASQVNSWVDRVTSGLIKEILPPGSVDHTTRLVLGNALYFK 45
>11_02_0014 - 7352619-7352918,7353173-7353418
Length = 181
Score = 35.1 bits (77), Expect = 0.073
Identities = 17/39 (43%), Positives = 23/39 (58%)
Frame = +2
Query: 533 KSINDXVEENTNNRIKDLVNPDSLXSATAAVLXNAIYFK 649
K IN+ V + TN I +++ S+ T VL NAIYFK
Sbjct: 88 KKINEWVSKATNKLIPEILPDGSVHRLTTLVLVNAIYFK 126
>11_02_0011 - 7337618-7338496,7338596-7338991
Length = 424
Score = 34.7 bits (76), Expect = 0.096
Identities = 18/39 (46%), Positives = 23/39 (58%)
Frame = +2
Query: 533 KSINDXVEENTNNRIKDLVNPDSLXSATAAVLXNAIYFK 649
K IN V + TN I +++ S+ TA VL NAIYFK
Sbjct: 138 KKINKWVSKATNKLIPEILPDGSVHVDTALVLVNAIYFK 176
>08_01_0906 +
8933230-8933797,8933894-8934543,8937956-8938615,
8939751-8939817,8940421-8940724,8942993-8942996,
8944539-8946449
Length = 1387
Score = 29.5 bits (63), Expect = 3.6
Identities = 12/42 (28%), Positives = 28/42 (66%)
Frame = +2
Query: 335 HDDAIRTEFASKSRDLRSIKGVELKMANKVYVHDGGKLDENF 460
+++++ A+K+ ++ ++KG+E+ A K++ G LDE+F
Sbjct: 594 NEESVANYCATKNNNVWNVKGLEVTGAIKLFDQRWGNLDEDF 635
>12_01_0053 -
438527-438670,439038-439247,439401-439530,439672-439842,
440233-440355,440439-440543,440656-441332,441498-441604,
441970-442177,442178-442245,444209-444411,444580-444663,
444780-445109,445238-445438,445667-445744,446236-446306
Length = 969
Score = 28.7 bits (61), Expect = 6.3
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = +2
Query: 353 TEFASKSRDLRSIKGVELKMANKVYVHDG 439
T+ S S+D++ ++ VE + N VHDG
Sbjct: 520 TQIPSASKDIKEVRAVEEFLPNDFVVHDG 548
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,668,943
Number of Sequences: 37544
Number of extensions: 320244
Number of successful extensions: 819
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 801
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 819
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2420970504
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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