Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP11_F_G02
         (903 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_01_0385 + 2915532-2916482                                           36   0.044
01_05_0726 - 24630080-24630778,24630899-24631011,24631088-246311...    29   3.8  
11_04_0158 + 14207463-14207629,14207724-14207774,14207874-142080...    28   8.8  
10_08_0940 - 21708557-21708733,21709058-21709142,21709330-217095...    28   8.8  

>11_01_0385 + 2915532-2916482
          Length = 316

 Score = 35.9 bits (79), Expect = 0.044
 Identities = 27/84 (32%), Positives = 35/84 (41%), Gaps = 3/84 (3%)
 Frame = +3

Query: 567 STPHVTGGXNPTXLXXXPRRFPPGKLPSXRSPWFPNPXXLYRHTCSAXPPLPXXR-GXLS 743
           ++PH  GG NP        ++PP  LP    P  P P   + H  +  PPLP        
Sbjct: 159 ASPHHGGGENPAWPRPGNNQWPP--LPPFNQP--PTPE--WPHPGNKWPPLPPFHPPPTP 212

Query: 744 HYPHPGXSL--QLPXXXXAXPPXP 809
            +PHPG +    LP      PP P
Sbjct: 213 AWPHPGGNKWPPLPPFPSHPPPTP 236


>01_05_0726 -
           24630080-24630778,24630899-24631011,24631088-24631169,
           24631248-24631337,24631412-24631469,24631661-24631756,
           24631835-24631908,24632006-24632068,24634111-24634320,
           24634869-24635048
          Length = 554

 Score = 29.5 bits (63), Expect = 3.8
 Identities = 22/78 (28%), Positives = 29/78 (37%), Gaps = 8/78 (10%)
 Frame = +3

Query: 570 TPHVTGGXNPTX----LXXXPRRFPPGKLPSXRSPWFP----NPXXLYRHTCSAXPPLPX 725
           TP V  G  P      +   P   PP + P   SP FP          +H       +P 
Sbjct: 393 TPAVPSGGAPLYTSQGILQGPPGVPPAQFPGYGSPQFPPGSAQAQMHQQHPVQGSQQMP- 451

Query: 726 XRGXLSHYPHPGXSLQLP 779
             G ++H P PG  +Q P
Sbjct: 452 --GQMNHQPPPGSFMQYP 467


>11_04_0158 +
           14207463-14207629,14207724-14207774,14207874-14208002,
           14209342-14209447,14209491-14209601,14210042-14210098,
           14210903-14211727
          Length = 481

 Score = 28.3 bits (60), Expect = 8.8
 Identities = 17/53 (32%), Positives = 20/53 (37%)
 Frame = +3

Query: 597 PTXLXXXPRRFPPGKLPSXRSPWFPNPXXLYRHTCSAXPPLPXXRGXLSHYPH 755
           P  L   P   PP +LP   SP FP     +  +    PP P      SH  H
Sbjct: 259 PPQLFNWPGHAPP-QLPPGASPLFPPGPAAFHPSSRPMPPFPGGGKDESHLFH 310


>10_08_0940 -
           21708557-21708733,21709058-21709142,21709330-21709551,
           21710640-21710815,21711883-21711946,21712433-21712507,
           21715114-21715199,21715297-21716715
          Length = 767

 Score = 28.3 bits (60), Expect = 8.8
 Identities = 15/31 (48%), Positives = 20/31 (64%), Gaps = 3/31 (9%)
 Frame = +1

Query: 295 NESAN---ARGEAVCVLGALPLPRSLTRCAR 378
           +ESAN   AR EAV  +G +P+   L RC+R
Sbjct: 434 DESANVDAARSEAVMRVGGIPMLLDLARCSR 464


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,369,633
Number of Sequences: 37544
Number of extensions: 342398
Number of successful extensions: 636
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 610
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 636
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2553813320
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)