Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP11_F_F24
(896 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P09335 Cluster: Low molecular 30 kDa lipoprotein PBMHP-... 144 3e-33
UniRef50_Q9BPP9 Cluster: Gag-like protein; n=2; Bombyx mori|Rep:... 132 9e-30
UniRef50_O96545 Cluster: Putative gag-related protein; n=1; Lyma... 98 3e-19
UniRef50_Q00802 Cluster: Low molecular mass 30 kDa lipoprotein 1... 76 1e-12
UniRef50_P19616 Cluster: Microvitellogenin precursor; n=3; Mandu... 75 2e-12
UniRef50_P09334 Cluster: Low molecular 30 kDa lipoprotein PBMHP-... 65 3e-09
UniRef50_Q75RW3 Cluster: BmLSP-T; n=2; Bombyx mori|Rep: BmLSP-T ... 62 1e-08
UniRef50_Q2PQU4 Cluster: Putative paralytic peptide-binding prot... 58 2e-07
UniRef50_UPI0000D578AA Cluster: PREDICTED: similar to Nucleic-ac... 55 3e-06
UniRef50_UPI0000D578A9 Cluster: PREDICTED: similar to RNA-direct... 53 1e-05
UniRef50_UPI00015B42A6 Cluster: PREDICTED: similar to polyprotei... 49 2e-04
UniRef50_O17451 Cluster: Gag-like protein; n=1; Culex pipiens|Re... 47 7e-04
UniRef50_Q76IB6 Cluster: Growth blocking peptide binding protein... 45 0.003
UniRef50_Q6UJ38 Cluster: Gag protein; n=4; Drosophila virilis|Re... 45 0.003
UniRef50_Q867Z5 Cluster: Gag protein; n=1; Drosophila virilis|Re... 42 0.016
UniRef50_UPI0000D57792 Cluster: PREDICTED: similar to Nucleic-ac... 42 0.021
UniRef50_UPI00015B43B0 Cluster: PREDICTED: similar to reverse tr... 41 0.037
UniRef50_UPI0000D578AF Cluster: PREDICTED: similar to RNA-direct... 41 0.037
UniRef50_Q9NBX5 Cluster: Nucleic-acid-binding protein from trans... 41 0.037
UniRef50_Q6KF09 Cluster: Gag protein; n=29; cellular organisms|R... 40 0.065
UniRef50_UPI0000D5792E Cluster: PREDICTED: similar to RNA-direct... 37 0.80
UniRef50_Q6GKZ8 Cluster: RE14563p; n=5; melanogaster subgroup|Re... 37 0.80
UniRef50_Q9SH73 Cluster: F22C12.1; n=6; Arabidopsis thaliana|Rep... 35 3.2
UniRef50_Q6J4U8 Cluster: Gag protein; n=8; Drosophila melanogast... 35 3.2
UniRef50_O44939 Cluster: Gag protein; n=1; Drosophila yakuba|Rep... 34 5.7
UniRef50_Q8I4S6 Cluster: DNA repair protein rhp16, putative; n=2... 33 9.9
UniRef50_Q57722 Cluster: Uncharacterized protein MJ0274; n=6; Me... 33 9.9
>UniRef50_P09335 Cluster: Low molecular 30 kDa lipoprotein PBMHP-12
precursor; n=5; Bombyx mori|Rep: Low molecular 30 kDa
lipoprotein PBMHP-12 precursor - Bombyx mori (Silk moth)
Length = 264
Score = 144 bits (349), Expect = 3e-33
Identities = 68/85 (80%), Positives = 72/85 (84%)
Frame = +3
Query: 258 AKARXSIVQNVVNNLIIDKRRNTMEYCYKLWVGNGQDIVKKYFPLSFRLIMAGNYVKLIY 437
++ + SIVQNVVNNLIIDKRRNTMEYCYKLWVGNGQDIVKKYFPLSFRLIMAGNYVKLIY
Sbjct: 58 SQGQGSIVQNVVNNLIIDKRRNTMEYCYKLWVGNGQDIVKKYFPLSFRLIMAGNYVKLIY 117
Query: 438 RNYNLALKLGGIHGNSRGDPVFGTG 512
RNYNLALKLG S +G G
Sbjct: 118 RNYNLALKLGSTTNPSNERIAYGDG 142
Score = 123 bits (297), Expect = 5e-27
Identities = 61/62 (98%), Positives = 61/62 (98%)
Frame = +2
Query: 86 MKLLVVFAMCVLAASAGVVELSADSMSPSNQDLEDKLYNSILTGDYDSAVRKSLEYESQG 265
MKLLVVFAMCV AASAGVVELSADSMSPSNQDLEDKLYNSILTGDYDSAVRKSLEYESQG
Sbjct: 1 MKLLVVFAMCVPAASAGVVELSADSMSPSNQDLEDKLYNSILTGDYDSAVRKSLEYESQG 60
Query: 266 QG 271
QG
Sbjct: 61 QG 62
>UniRef50_Q9BPP9 Cluster: Gag-like protein; n=2; Bombyx mori|Rep:
Gag-like protein - Bombyx mori (Silk moth)
Length = 553
Score = 132 bits (320), Expect = 9e-30
Identities = 57/71 (80%), Positives = 58/71 (81%)
Frame = -3
Query: 672 HKKALRAXAHNCQXYGXSSRNXHARPRCVKXLDDHATTLXTRDQKTATEPPSCVLCRTQG 493
HKK + HNCQ YG SSRN HARPRCVK L DHAT L RDQKTATEPPSCVLCRTQG
Sbjct: 339 HKKGTPSQCHNCQLYGHSSRNCHARPRCVKCLGDHATALCARDQKTATEPPSCVLCRTQG 398
Query: 492 HPANYRGCPRA 460
HPANYRGCPRA
Sbjct: 399 HPANYRGCPRA 409
Score = 39.5 bits (88), Expect = 0.11
Identities = 22/46 (47%), Positives = 25/46 (54%)
Frame = -1
Query: 830 PVXAVHPXAHRXXGGEPYNXXXXRPPVYPREGKKIFXVRTVCRXSG 693
PV +VH H G EPYN P EGK IF +RTVC+ SG
Sbjct: 289 PVNSVH-RMHTGRGREPYNMVLIALQPTP-EGKHIFNIRTVCKLSG 332
>UniRef50_O96545 Cluster: Putative gag-related protein; n=1;
Lymantria dispar|Rep: Putative gag-related protein -
Lymantria dispar (Gypsy moth)
Length = 537
Score = 97.9 bits (233), Expect = 3e-19
Identities = 45/79 (56%), Positives = 49/79 (62%), Gaps = 2/79 (2%)
Frame = -3
Query: 681 KPXHKKALRAXAHNCQXYGXSSRNXHARPRCVKXLDDHATTLXTR--DQKTATEPPSCVL 508
+P HK A H CQ YG SS+N ARPRCVK L DH T+ R D EPP+CVL
Sbjct: 307 EPPHKNGNLAQCHKCQLYGQSSKNCFARPRCVKCLGDHHTSQCERPKDISLCKEPPACVL 366
Query: 507 CRTQGHPANYRGCPRASER 451
C GHPANYRGCPRA R
Sbjct: 367 CGEYGHPANYRGCPRAPRR 385
>UniRef50_Q00802 Cluster: Low molecular mass 30 kDa lipoprotein 19G1
precursor; n=3; Bombyx mori|Rep: Low molecular mass 30
kDa lipoprotein 19G1 precursor - Bombyx mori (Silk moth)
Length = 256
Score = 76.2 bits (179), Expect = 1e-12
Identities = 36/88 (40%), Positives = 51/88 (57%)
Frame = +3
Query: 267 RXSIVQNVVNNLIIDKRRNTMEYCYKLWVGNGQDIVKKYFPLSFRLIMAGNYVKLIYRNY 446
+ ++ NVVN LI + + N MEY Y+LW+ +DIV+ FP+ FRLI A N +KL+Y+
Sbjct: 55 KSEVITNVVNKLIRNNKMNCMEYAYQLWLQGSKDIVRDCFPVEFRLIFAENAIKLMYKRD 114
Query: 447 NLALKLGGIHGNSRGDPVFGTGRS*VVP 530
LAL L G P +G G+ P
Sbjct: 115 GLALTLSNDVQGDDGRPRYGDGKDKTSP 142
Score = 39.9 bits (89), Expect = 0.086
Identities = 25/53 (47%), Positives = 33/53 (62%)
Frame = +2
Query: 86 MKLLVVFAMCVLAASAGVVELSADSMSPSNQDLEDKLYNSILTGDYDSAVRKS 244
MK +V +C+ AS +ADS P N LE++LYNS++ DYDSAV KS
Sbjct: 1 MKPAIVI-LCLFVASL----YAADSDVP-NDILEEQLYNSVVVADYDSAVEKS 47
>UniRef50_P19616 Cluster: Microvitellogenin precursor; n=3; Manduca
sexta|Rep: Microvitellogenin precursor - Manduca sexta
(Tobacco hawkmoth) (Tobacco hornworm)
Length = 249
Score = 74.9 bits (176), Expect = 2e-12
Identities = 36/80 (45%), Positives = 52/80 (65%)
Frame = +3
Query: 261 KARXSIVQNVVNNLIIDKRRNTMEYCYKLWVGNGQDIVKKYFPLSFRLIMAGNYVKLIYR 440
+ + I+ VN LI D +RNTMEY Y+LW +DIVK+ FP+ FR+++ + +KLI +
Sbjct: 46 QGKGDIITEAVNRLIRDSQRNTMEYAYQLWSLEARDIVKERFPIQFRMMLGEHSIKLINK 105
Query: 441 NYNLALKLGGIHGNSRGDPV 500
NLA+KLG NS GD +
Sbjct: 106 RDNLAMKLGVATDNS-GDRI 124
Score = 35.9 bits (79), Expect = 1.4
Identities = 14/28 (50%), Positives = 20/28 (71%)
Frame = +2
Query: 188 DKLYNSILTGDYDSAVRKSLEYESQGQG 271
D +YN+++ GD D AV KS E + QG+G
Sbjct: 22 DDIYNNVVIGDIDGAVAKSKELQKQGKG 49
>UniRef50_P09334 Cluster: Low molecular 30 kDa lipoprotein PBMHP-6
precursor; n=2; Bombyx mori|Rep: Low molecular 30 kDa
lipoprotein PBMHP-6 precursor - Bombyx mori (Silk moth)
Length = 256
Score = 64.9 bits (151), Expect = 3e-09
Identities = 28/66 (42%), Positives = 44/66 (66%)
Frame = +3
Query: 267 RXSIVQNVVNNLIIDKRRNTMEYCYKLWVGNGQDIVKKYFPLSFRLIMAGNYVKLIYRNY 446
+ +++ V LI + +RNTM++ Y+LW +G++IVK YFP+ FR+I VKLI +
Sbjct: 57 KGEVIKEAVKRLIENGKRNTMDFAYQLWTKDGKEIVKSYFPIQFRVIFTEQTVKLINKRD 116
Query: 447 NLALKL 464
+ ALKL
Sbjct: 117 HHALKL 122
Score = 35.5 bits (78), Expect = 1.9
Identities = 19/59 (32%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
Frame = +2
Query: 101 VFAMCVLAASAGVVELSADSMSPSNQD-LEDKLYNSILTGDYDSAVRKSLEYESQGQGQ 274
V A+C LA++A +++P D L ++LY S++ G+Y++A+ K EY + +G+
Sbjct: 9 VLAVCALASNA--------TLAPRTDDVLAEQLYMSVVIGEYETAIAKCSEYLKEKKGE 59
>UniRef50_Q75RW3 Cluster: BmLSP-T; n=2; Bombyx mori|Rep: BmLSP-T -
Bombyx mori (Silk moth)
Length = 267
Score = 62.5 bits (145), Expect = 1e-08
Identities = 30/62 (48%), Positives = 42/62 (67%), Gaps = 2/62 (3%)
Frame = +3
Query: 288 VVNNLIIDKRRNTMEYCYKLW--VGNGQDIVKKYFPLSFRLIMAGNYVKLIYRNYNLALK 461
+VN LI + +RN + YKLW + Q+IVK+YFP+ FR I + N VK+I + NLA+K
Sbjct: 69 IVNRLIRENKRNICDLAYKLWDYMDESQEIVKEYFPVIFRQIFSENSVKIINKRDNLAIK 128
Query: 462 LG 467
LG
Sbjct: 129 LG 130
Score = 37.1 bits (82), Expect = 0.61
Identities = 20/66 (30%), Positives = 38/66 (57%), Gaps = 2/66 (3%)
Frame = +2
Query: 86 MKLLVVFAMCVLAASAGVVELSADSMSP--SNQDLEDKLYNSILTGDYDSAVRKSLEYES 259
MK L V A+C++AASA + D P + ED + N+I+T +Y++A +++ +
Sbjct: 1 MKTLAVLALCLVAASA-TPSIDGDDRYPIHAPSGYEDIVTNAIITRNYEAAASMTVQLKR 59
Query: 260 QGQGQH 277
+ G++
Sbjct: 60 RSSGRY 65
>UniRef50_Q2PQU4 Cluster: Putative paralytic peptide-binding
protein; n=1; Bombyx mori|Rep: Putative paralytic
peptide-binding protein - Bombyx mori (Silk moth)
Length = 436
Score = 58.4 bits (135), Expect = 2e-07
Identities = 27/63 (42%), Positives = 40/63 (63%)
Frame = +3
Query: 276 IVQNVVNNLIIDKRRNTMEYCYKLWVGNGQDIVKKYFPLSFRLIMAGNYVKLIYRNYNLA 455
+ ++VV+ L+ +N M + YKLW +DIV+ YFP F+LI+ +KLI +YN A
Sbjct: 237 VCRDVVSRLVSQGIKNAMSFAYKLWHEGHKDIVEDYFPSEFQLILDQKRIKLIGNHYNQA 296
Query: 456 LKL 464
LKL
Sbjct: 297 LKL 299
>UniRef50_UPI0000D578AA Cluster: PREDICTED: similar to
Nucleic-acid-binding protein from mobile element jockey
(ORF1); n=1; Tribolium castaneum|Rep: PREDICTED: similar
to Nucleic-acid-binding protein from mobile element
jockey (ORF1) - Tribolium castaneum
Length = 347
Score = 54.8 bits (126), Expect = 3e-06
Identities = 27/68 (39%), Positives = 34/68 (50%)
Frame = -3
Query: 669 KKALRAXAHNCQXYGXSSRNXHARPRCVKXLDDHATTLXTRDQKTATEPPSCVLCRTQGH 490
KK+ H CQ YG S A +C+K +DH+T T KT P +C C H
Sbjct: 189 KKSYNGQCHRCQMYGHSQPGCKADFKCLKCAEDHSTHACT---KTKATPATCANCGGP-H 244
Query: 489 PANYRGCP 466
PAN+ GCP
Sbjct: 245 PANFSGCP 252
>UniRef50_UPI0000D578A9 Cluster: PREDICTED: similar to RNA-directed
DNA polymerase from mobile element jockey (Reverse
transcriptase); n=1; Tribolium castaneum|Rep: PREDICTED:
similar to RNA-directed DNA polymerase from mobile
element jockey (Reverse transcriptase) - Tribolium
castaneum
Length = 894
Score = 52.8 bits (121), Expect = 1e-05
Identities = 27/69 (39%), Positives = 34/69 (49%)
Frame = -3
Query: 669 KKALRAXAHNCQXYGXSSRNXHARPRCVKXLDDHATTLXTRDQKTATEPPSCVLCRTQGH 490
K A H CQ + + RN A RCVK H T + +++K EPP C C H
Sbjct: 157 KSGKAAQCHRCQRFFHAQRNCTAEHRCVKCGKAHDTKVCAKERK---EPPKCANCNGP-H 212
Query: 489 PANYRGCPR 463
ANYR CP+
Sbjct: 213 TANYRDCPQ 221
>UniRef50_UPI00015B42A6 Cluster: PREDICTED: similar to polyprotein;
n=1; Nasonia vitripennis|Rep: PREDICTED: similar to
polyprotein - Nasonia vitripennis
Length = 1249
Score = 48.8 bits (111), Expect = 2e-04
Identities = 27/75 (36%), Positives = 33/75 (44%), Gaps = 1/75 (1%)
Frame = -3
Query: 681 KPXHKKALRAXAHNCQXYGXSSRNXHARPRCVKXLDDHAT-TLXTRDQKTATEPPSCVLC 505
+P K CQ +G ++ HA C DHAT +D K PP C C
Sbjct: 265 EPKRKSKFTPQCKRCQKFGHTANYCHANWVCAFCAKDHATPACQKKDNKEI--PPVCANC 322
Query: 504 RTQGHPANYRGCPRA 460
Q H A YRGCP+A
Sbjct: 323 NGQ-HRATYRGCPKA 336
>UniRef50_O17451 Cluster: Gag-like protein; n=1; Culex pipiens|Rep:
Gag-like protein - Culex pipiens (House mosquito)
Length = 466
Score = 46.8 bits (106), Expect = 7e-04
Identities = 28/70 (40%), Positives = 34/70 (48%), Gaps = 8/70 (11%)
Frame = -3
Query: 654 AXAHNCQXYGXSSRNXHARPRCVKXLDDH---ATTLXTR----DQKTATEP-PSCVLCRT 499
A H CQ +G SRN + RPRCVK + H A L + D+ T+P C C
Sbjct: 284 AQCHRCQKFGHGSRNCNLRPRCVKCGESHLSEACALPRKADLGDKAEQTKPHVKCANC-D 342
Query: 498 QGHPANYRGC 469
H NYRGC
Sbjct: 343 GNHTGNYRGC 352
>UniRef50_Q76IB6 Cluster: Growth blocking peptide binding protein;
n=1; Mythimna separata|Rep: Growth blocking peptide
binding protein - Pseudaletia separata (Oriental
armyworm) (Mythimna separata)
Length = 430
Score = 44.8 bits (101), Expect = 0.003
Identities = 20/59 (33%), Positives = 33/59 (55%)
Frame = +3
Query: 288 VVNNLIIDKRRNTMEYCYKLWVGNGQDIVKKYFPLSFRLIMAGNYVKLIYRNYNLALKL 464
+V L+ R M + YKLW G ++IV+ +FP +F+ I + V ++ + Y LKL
Sbjct: 232 IVTRLMTAFPRKLMSFAYKLWHGGAKEIVRNHFPKAFQHIFNEDAVTIVNKQYQQPLKL 290
Score = 35.1 bits (77), Expect = 2.4
Identities = 12/27 (44%), Positives = 20/27 (74%)
Frame = +2
Query: 173 NQDLEDKLYNSILTGDYDSAVRKSLEY 253
N + E+++YNS++ GDYD+AV + Y
Sbjct: 194 NHNFEEEVYNSVINGDYDAAVNMAQSY 220
>UniRef50_Q6UJ38 Cluster: Gag protein; n=4; Drosophila virilis|Rep:
Gag protein - Drosophila virilis (Fruit fly)
Length = 907
Score = 44.8 bits (101), Expect = 0.003
Identities = 22/60 (36%), Positives = 30/60 (50%)
Frame = -3
Query: 645 HNCQXYGXSSRNXHARPRCVKXLDDHATTLXTRDQKTATEPPSCVLCRTQGHPANYRGCP 466
H CQ + ++R RCVK ++H T K A P +C C + H ANY+GCP
Sbjct: 570 HRCQRFNHTARYCRHPARCVKCGNEHLTQTCV---KPANVPATCANCGSD-HTANYKGCP 625
>UniRef50_Q867Z5 Cluster: Gag protein; n=1; Drosophila virilis|Rep:
Gag protein - Drosophila virilis (Fruit fly)
Length = 1037
Score = 42.3 bits (95), Expect = 0.016
Identities = 23/60 (38%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Frame = -3
Query: 645 HNCQXYGXSSRNXHARP-RCVKXLDDHATTLXTRDQKTATEPPSCVLCRTQGHPANYRGC 469
H CQ +G S+N RP C+K + H TT T+ + T P CV C+ H A+++GC
Sbjct: 628 HRCQSFG-HSKNYCRRPFACLKCGEQHPTTTCTKPRNT---PAKCVNCKAD-HIASFKGC 682
>UniRef50_UPI0000D57792 Cluster: PREDICTED: similar to
Nucleic-acid-binding protein from mobile element jockey
(ORF1); n=1; Tribolium castaneum|Rep: PREDICTED: similar
to Nucleic-acid-binding protein from mobile element
jockey (ORF1) - Tribolium castaneum
Length = 295
Score = 41.9 bits (94), Expect = 0.021
Identities = 19/60 (31%), Positives = 30/60 (50%)
Frame = -3
Query: 681 KPXHKKALRAXAHNCQXYGXSSRNXHARPRCVKXLDDHATTLXTRDQKTATEPPSCVLCR 502
+P K H+CQ +G + N +A+ +C+K + H+T L K T PP C C+
Sbjct: 232 EPLKNKGFTIQCHSCQIFGHAQINCNAQFKCMKCGESHSTHLCA---KPKTTPPKCANCQ 288
>UniRef50_UPI00015B43B0 Cluster: PREDICTED: similar to reverse
transcriptase homolog, partial; n=1; Nasonia
vitripennis|Rep: PREDICTED: similar to reverse
transcriptase homolog, partial - Nasonia vitripennis
Length = 1316
Score = 41.1 bits (92), Expect = 0.037
Identities = 25/62 (40%), Positives = 30/62 (48%), Gaps = 4/62 (6%)
Frame = -3
Query: 639 CQXYGXSSRNXHARPRCVKXLDDHATTLXTR---DQKTATE-PPSCVLCRTQGHPANYRG 472
CQ G +S N + RCVK ++H R D T+ P CV C Q H A YRG
Sbjct: 192 CQRVGHASANCNLGYRCVKYRNNHKEGECQRKKDDNNANTDTTPECVNCNGQ-HAAYYRG 250
Query: 471 CP 466
CP
Sbjct: 251 CP 252
>UniRef50_UPI0000D578AF Cluster: PREDICTED: similar to RNA-directed
DNA polymerase from mobile element jockey (Reverse
transcriptase); n=7; Tribolium castaneum|Rep: PREDICTED:
similar to RNA-directed DNA polymerase from mobile
element jockey (Reverse transcriptase) - Tribolium
castaneum
Length = 1336
Score = 41.1 bits (92), Expect = 0.037
Identities = 22/56 (39%), Positives = 28/56 (50%)
Frame = -3
Query: 681 KPXHKKALRAXAHNCQXYGXSSRNXHARPRCVKXLDDHATTLXTRDQKTATEPPSC 514
KP K A H CQ + + RN A RCVK + H T + T++ K EPP C
Sbjct: 329 KP-RKSGKAAQCHRCQRFFHAQRNCTAEHRCVKCGEAHDTKVCTKESK---EPPKC 380
>UniRef50_Q9NBX5 Cluster: Nucleic-acid-binding protein from
transposon X-element; n=2; Drosophila melanogaster|Rep:
Nucleic-acid-binding protein from transposon X-element -
Drosophila melanogaster (Fruit fly)
Length = 501
Score = 41.1 bits (92), Expect = 0.037
Identities = 23/73 (31%), Positives = 33/73 (45%)
Frame = -3
Query: 681 KPXHKKALRAXAHNCQXYGXSSRNXHARPRCVKXLDDHATTLXTRDQKTATEPPSCVLCR 502
+P K+ H CQ G +++ CVK +H TR + E +C C
Sbjct: 276 EPLRKRNAIVQCHRCQQIGHTAKYCRKAHICVKCAGEHPAKDCTRPR---IELCTCYNCG 332
Query: 501 TQGHPANYRGCPR 463
Q HPANY+GC +
Sbjct: 333 GQ-HPANYKGCSK 344
>UniRef50_Q6KF09 Cluster: Gag protein; n=29; cellular organisms|Rep:
Gag protein - Drosophila melanogaster (Fruit fly)
Length = 965
Score = 40.3 bits (90), Expect = 0.065
Identities = 20/60 (33%), Positives = 30/60 (50%)
Frame = -3
Query: 645 HNCQXYGXSSRNXHARPRCVKXLDDHATTLXTRDQKTATEPPSCVLCRTQGHPANYRGCP 466
+ CQ + S + PRC+K H ++ T K T P +CV C + H + Y+GCP
Sbjct: 664 YRCQGFRHSKNSCMRPPRCMKCAGGHLSSCCT---KPRTTPATCVNCSGE-HISAYKGCP 719
>UniRef50_UPI0000D5792E Cluster: PREDICTED: similar to RNA-directed
DNA polymerase from mobile element jockey (Reverse
transcriptase), partial; n=1; Tribolium castaneum|Rep:
PREDICTED: similar to RNA-directed DNA polymerase from
mobile element jockey (Reverse transcriptase), partial -
Tribolium castaneum
Length = 830
Score = 36.7 bits (81), Expect = 0.80
Identities = 18/42 (42%), Positives = 24/42 (57%)
Frame = -3
Query: 588 VKXLDDHATTLXTRDQKTATEPPSCVLCRTQGHPANYRGCPR 463
VK + H T + +++K EPP C C H ANYRGCP+
Sbjct: 12 VKCGEAHDTKVCAKERK---EPPKCANCNGP-HTANYRGCPQ 49
>UniRef50_Q6GKZ8 Cluster: RE14563p; n=5; melanogaster subgroup|Rep:
RE14563p - Drosophila melanogaster (Fruit fly)
Length = 409
Score = 36.7 bits (81), Expect = 0.80
Identities = 22/68 (32%), Positives = 27/68 (39%)
Frame = -3
Query: 672 HKKALRAXAHNCQXYGXSSRNXHARPRCVKXLDDHATTLXTRDQKTATEPPSCVLCRTQG 493
HK+ NCQ YG + + CV + H TT K C C +
Sbjct: 220 HKRINPVQCTNCQEYGHTKAYCTLKSVCVVCSEPH-TTANCPKNKDDKSVKKCSNC-GEK 277
Query: 492 HPANYRGC 469
H ANYRGC
Sbjct: 278 HTANYRGC 285
>UniRef50_Q9SH73 Cluster: F22C12.1; n=6; Arabidopsis thaliana|Rep:
F22C12.1 - Arabidopsis thaliana (Mouse-ear cress)
Length = 3290
Score = 34.7 bits (76), Expect = 3.2
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = +3
Query: 300 LIIDKRRNTMEYCYKLWVGNGQDIVKKYFPLSF 398
+++D + EY KL + +G D KYFPL+F
Sbjct: 2227 IVVDTKNLNCEYQLKLMIASGVDAANKYFPLAF 2259
>UniRef50_Q6J4U8 Cluster: Gag protein; n=8; Drosophila
melanogaster|Rep: Gag protein - Drosophila melanogaster
(Fruit fly)
Length = 1047
Score = 34.7 bits (76), Expect = 3.2
Identities = 17/60 (28%), Positives = 28/60 (46%)
Frame = -3
Query: 645 HNCQXYGXSSRNXHARPRCVKXLDDHATTLXTRDQKTATEPPSCVLCRTQGHPANYRGCP 466
H CQ +G + +C+K HA+ T+ + P +C C H ++Y+GCP
Sbjct: 796 HRCQCFGHTKNYCRNPFKCMKCGQLHASVSCTKPKNL---PATCANC-NGSHVSSYKGCP 851
>UniRef50_O44939 Cluster: Gag protein; n=1; Drosophila yakuba|Rep:
Gag protein - Drosophila yakuba (Fruit fly)
Length = 895
Score = 33.9 bits (74), Expect = 5.7
Identities = 17/58 (29%), Positives = 28/58 (48%)
Frame = -3
Query: 639 CQXYGXSSRNXHARPRCVKXLDDHATTLXTRDQKTATEPPSCVLCRTQGHPANYRGCP 466
CQ + + PRC+K H ++ T+ + T P +C C+ H + Y+GCP
Sbjct: 621 CQGFRHARNTCMKPPRCMKCAGQHWSSECTKPRST---PATCSNCQ-GNHISAYKGCP 674
>UniRef50_Q8I4S6 Cluster: DNA repair protein rhp16, putative; n=2;
Plasmodium|Rep: DNA repair protein rhp16, putative -
Plasmodium falciparum (isolate 3D7)
Length = 1647
Score = 33.1 bits (72), Expect = 9.9
Identities = 13/28 (46%), Positives = 19/28 (67%)
Frame = +3
Query: 303 IIDKRRNTMEYCYKLWVGNGQDIVKKYF 386
I++K + EYC +L++ N DI KKYF
Sbjct: 505 IVNKHKQPCEYCGRLYLPNNLDIHKKYF 532
>UniRef50_Q57722 Cluster: Uncharacterized protein MJ0274; n=6;
Methanococcales|Rep: Uncharacterized protein MJ0274 -
Methanococcus jannaschii
Length = 543
Score = 33.1 bits (72), Expect = 9.9
Identities = 12/15 (80%), Positives = 12/15 (80%)
Frame = -3
Query: 480 YRGCPRASERGCSFC 436
YRGCPRA GCSFC
Sbjct: 214 YRGCPRALTGGCSFC 228
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 815,560,639
Number of Sequences: 1657284
Number of extensions: 15648622
Number of successful extensions: 39765
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 37982
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 39735
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 81161904978
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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