Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP11_F_F24
(896 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ635224-1|CAG25619.1| 951|Drosophila melanogaster gag protein ... 42 0.001
X68816-2|CAA48714.1| 536|Drosophila melanogaster T-element prot... 42 0.002
X68130-1|CAA48237.1| 943|Drosophila melanogaster protein ( D.me... 42 0.002
U06920-1|AAC17188.3| 921|Drosophila melanogaster probable gag p... 42 0.002
S56442-2|AAA14198.2| 536|Drosophila melanogaster Orf2 protein. 42 0.002
AF237761-1|AAF81410.1| 501|Drosophila melanogaster unknown prot... 41 0.002
AJ542581-1|CAD65868.3| 965|Drosophila melanogaster gag protein ... 40 0.003
M17214-1|AAA28507.1| 122|Drosophila melanogaster protein ( D.me... 40 0.006
U14101-1|AAC46493.1| 1043|Drosophila melanogaster putative singl... 37 0.033
AY561850-1|AAS68533.1| 970|Drosophila melanogaster gag protein ... 37 0.033
AY035777-1|AAK77970.1| 257|Drosophila melanogaster gag protein ... 37 0.033
AJ566116-1|CAD92792.1| 970|Drosophila melanogaster gag protein ... 37 0.033
X17551-1|CAA35586.1| 565|Drosophila melanogaster ORF1 for putat... 37 0.043
BT014916-1|AAT47767.1| 409|Drosophila melanogaster RE14563p pro... 37 0.043
AY600955-1|AAT12844.1| 1047|Drosophila melanogaster gag protein ... 35 0.17
>AJ635224-1|CAG25619.1| 951|Drosophila melanogaster gag protein
protein.
Length = 951
Score = 41.9 bits (94), Expect = 0.001
Identities = 19/60 (31%), Positives = 32/60 (53%)
Frame = -3
Query: 645 HNCQXYGXSSRNXHARPRCVKXLDDHATTLXTRDQKTATEPPSCVLCRTQGHPANYRGCP 466
+ CQ + + + PRC+K DH ++ T+ + T P +CV C + H + Y+GCP
Sbjct: 657 YRCQGFRHAKNSCMKPPRCMKCAGDHLSSCCTKPRST---PATCVNCSGE-HISAYKGCP 712
>X68816-2|CAA48714.1| 536|Drosophila melanogaster T-element
protein.
Length = 536
Score = 41.5 bits (93), Expect = 0.002
Identities = 20/60 (33%), Positives = 31/60 (51%)
Frame = -3
Query: 645 HNCQXYGXSSRNXHARPRCVKXLDDHATTLXTRDQKTATEPPSCVLCRTQGHPANYRGCP 466
+ CQ + + + PRC+K +H ++ T K T P +CV C Q H + Y+GCP
Sbjct: 242 YRCQGFRHAKNSCMRPPRCMKSAGEHLSSCCT---KPRTTPATCVNCSGQ-HISAYKGCP 297
>X68130-1|CAA48237.1| 943|Drosophila melanogaster protein (
D.melanogaster DNA sequenceof Het-A transposable element
9D4. ).
Length = 943
Score = 41.5 bits (93), Expect = 0.002
Identities = 20/60 (33%), Positives = 31/60 (51%)
Frame = -3
Query: 645 HNCQXYGXSSRNXHARPRCVKXLDDHATTLXTRDQKTATEPPSCVLCRTQGHPANYRGCP 466
+ CQ + + + PRC+K +H ++ T K T P +CV C Q H + Y+GCP
Sbjct: 649 YRCQGFRHAKNSCMRPPRCMKCAGEHLSSCCT---KPRTTPATCVNCSGQ-HISAYKGCP 704
>U06920-1|AAC17188.3| 921|Drosophila melanogaster probable gag
protein protein.
Length = 921
Score = 41.5 bits (93), Expect = 0.002
Identities = 20/60 (33%), Positives = 31/60 (51%)
Frame = -3
Query: 645 HNCQXYGXSSRNXHARPRCVKXLDDHATTLXTRDQKTATEPPSCVLCRTQGHPANYRGCP 466
+ CQ + + + PRC+K +H ++ T K T P +CV C Q H + Y+GCP
Sbjct: 627 YRCQGFRHAKNSCMRPPRCMKCAGEHLSSCCT---KPRTTPATCVNCSGQ-HISAYKGCP 682
>S56442-2|AAA14198.2| 536|Drosophila melanogaster Orf2 protein.
Length = 536
Score = 41.5 bits (93), Expect = 0.002
Identities = 20/60 (33%), Positives = 31/60 (51%)
Frame = -3
Query: 645 HNCQXYGXSSRNXHARPRCVKXLDDHATTLXTRDQKTATEPPSCVLCRTQGHPANYRGCP 466
+ CQ + + + PRC+K +H ++ T K T P +CV C Q H + Y+GCP
Sbjct: 242 YRCQGFRHAKNSCMRPPRCMKSAGEHLSSCCT---KPRTTPATCVNCSGQ-HISAYKGCP 297
>AF237761-1|AAF81410.1| 501|Drosophila melanogaster unknown
protein.
Length = 501
Score = 41.1 bits (92), Expect = 0.002
Identities = 23/73 (31%), Positives = 33/73 (45%)
Frame = -3
Query: 681 KPXHKKALRAXAHNCQXYGXSSRNXHARPRCVKXLDDHATTLXTRDQKTATEPPSCVLCR 502
+P K+ H CQ G +++ CVK +H TR + E +C C
Sbjct: 276 EPLRKRNAIVQCHRCQQIGHTAKYCRKAHICVKCAGEHPAKDCTRPR---IELCTCYNCG 332
Query: 501 TQGHPANYRGCPR 463
Q HPANY+GC +
Sbjct: 333 GQ-HPANYKGCSK 344
>AJ542581-1|CAD65868.3| 965|Drosophila melanogaster gag protein
protein.
Length = 965
Score = 40.3 bits (90), Expect = 0.003
Identities = 20/60 (33%), Positives = 30/60 (50%)
Frame = -3
Query: 645 HNCQXYGXSSRNXHARPRCVKXLDDHATTLXTRDQKTATEPPSCVLCRTQGHPANYRGCP 466
+ CQ + S + PRC+K H ++ T K T P +CV C + H + Y+GCP
Sbjct: 664 YRCQGFRHSKNSCMRPPRCMKCAGGHLSSCCT---KPRTTPATCVNCSGE-HISAYKGCP 719
>M17214-1|AAA28507.1| 122|Drosophila melanogaster protein (
D.melanogaster Fw repetitiveelement putative reverse
transcriptase, complete cds,and putative binding
protein, 3' end. ).
Length = 122
Score = 39.5 bits (88), Expect = 0.006
Identities = 24/69 (34%), Positives = 30/69 (43%)
Frame = -3
Query: 672 HKKALRAXAHNCQXYGXSSRNXHARPRCVKXLDDHATTLXTRDQKTATEPPSCVLCRTQG 493
HK+ NCQ YG + P CV D H + +++ A E C C
Sbjct: 32 HKRNAPVQCTNCQEYGHTRSYCTLAPVCVVCGDLHDSKQCQINKENACE-KKCNNC-GGN 89
Query: 492 HPANYRGCP 466
H ANYRGCP
Sbjct: 90 HTANYRGCP 98
>U14101-1|AAC46493.1| 1043|Drosophila melanogaster putative
single-stranded nucleicacid binding protein protein.
Length = 1043
Score = 37.1 bits (82), Expect = 0.033
Identities = 19/64 (29%), Positives = 29/64 (45%)
Frame = -3
Query: 645 HNCQXYGXSSRNXHARPRCVKXLDDHATTLXTRDQKTATEPPSCVLCRTQGHPANYRGCP 466
H CQ +G + +C+K HAT T+ + P +C C H ++Y+GCP
Sbjct: 796 HRCQCFGHTKNYCRNPFKCMKCGQLHATVSCTKPKNL---PATCANC-NGSHVSSYKGCP 851
Query: 465 RASE 454
E
Sbjct: 852 AFQE 855
>AY561850-1|AAS68533.1| 970|Drosophila melanogaster gag protein
protein.
Length = 970
Score = 37.1 bits (82), Expect = 0.033
Identities = 19/64 (29%), Positives = 29/64 (45%)
Frame = -3
Query: 645 HNCQXYGXSSRNXHARPRCVKXLDDHATTLXTRDQKTATEPPSCVLCRTQGHPANYRGCP 466
H CQ +G + +C+K HAT T+ + P +C C H ++Y+GCP
Sbjct: 719 HRCQCFGHTKNYCRNPFKCMKCGQLHATVSCTKPKNL---PATCANC-NGSHVSSYKGCP 774
Query: 465 RASE 454
E
Sbjct: 775 AFQE 778
>AY035777-1|AAK77970.1| 257|Drosophila melanogaster gag protein
protein.
Length = 257
Score = 37.1 bits (82), Expect = 0.033
Identities = 19/64 (29%), Positives = 29/64 (45%)
Frame = -3
Query: 645 HNCQXYGXSSRNXHARPRCVKXLDDHATTLXTRDQKTATEPPSCVLCRTQGHPANYRGCP 466
H CQ +G + +C+K HAT T+ + P +C C H ++Y+GCP
Sbjct: 6 HRCQCFGHTKNYCRNPFKCMKCGQLHATVSCTKPKNL---PATCANC-NGSHVSSYKGCP 61
Query: 465 RASE 454
E
Sbjct: 62 AFQE 65
>AJ566116-1|CAD92792.1| 970|Drosophila melanogaster gag protein
protein.
Length = 970
Score = 37.1 bits (82), Expect = 0.033
Identities = 19/64 (29%), Positives = 29/64 (45%)
Frame = -3
Query: 645 HNCQXYGXSSRNXHARPRCVKXLDDHATTLXTRDQKTATEPPSCVLCRTQGHPANYRGCP 466
H CQ +G + +C+K HAT T+ + P +C C H ++Y+GCP
Sbjct: 719 HRCQCFGHTKNYCRNPFKCMKCGQLHATVSCTKPKNL---PATCANC-NGSHVSSYKGCP 774
Query: 465 RASE 454
E
Sbjct: 775 AFQE 778
>X17551-1|CAA35586.1| 565|Drosophila melanogaster ORF1 for putative
RNA bindingprotein protein.
Length = 565
Score = 36.7 bits (81), Expect = 0.043
Identities = 22/68 (32%), Positives = 27/68 (39%)
Frame = -3
Query: 672 HKKALRAXAHNCQXYGXSSRNXHARPRCVKXLDDHATTLXTRDQKTATEPPSCVLCRTQG 493
HK+ NCQ YG + + CV + H TT K C C +
Sbjct: 376 HKRINPVQCTNCQEYGHTKAYCTLKSVCVVCSEPH-TTANCPKNKDDKSVKKCSNC-GEK 433
Query: 492 HPANYRGC 469
H ANYRGC
Sbjct: 434 HTANYRGC 441
>BT014916-1|AAT47767.1| 409|Drosophila melanogaster RE14563p
protein.
Length = 409
Score = 36.7 bits (81), Expect = 0.043
Identities = 22/68 (32%), Positives = 27/68 (39%)
Frame = -3
Query: 672 HKKALRAXAHNCQXYGXSSRNXHARPRCVKXLDDHATTLXTRDQKTATEPPSCVLCRTQG 493
HK+ NCQ YG + + CV + H TT K C C +
Sbjct: 220 HKRINPVQCTNCQEYGHTKAYCTLKSVCVVCSEPH-TTANCPKNKDDKSVKKCSNC-GEK 277
Query: 492 HPANYRGC 469
H ANYRGC
Sbjct: 278 HTANYRGC 285
>AY600955-1|AAT12844.1| 1047|Drosophila melanogaster gag protein
protein.
Length = 1047
Score = 34.7 bits (76), Expect = 0.17
Identities = 17/60 (28%), Positives = 28/60 (46%)
Frame = -3
Query: 645 HNCQXYGXSSRNXHARPRCVKXLDDHATTLXTRDQKTATEPPSCVLCRTQGHPANYRGCP 466
H CQ +G + +C+K HA+ T+ + P +C C H ++Y+GCP
Sbjct: 796 HRCQCFGHTKNYCRNPFKCMKCGQLHASVSCTKPKNL---PATCANC-NGSHVSSYKGCP 851
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 37,775,461
Number of Sequences: 53049
Number of extensions: 770879
Number of successful extensions: 2213
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 2048
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2197
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4362070239
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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