Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP11_F_F21
(904 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U58757-9|AAM75377.1| 503|Caenorhabditis elegans Hypothetical pr... 29 3.4
U58757-8|AAC47918.3| 506|Caenorhabditis elegans Hypothetical pr... 29 3.4
AC024772-3|AAF60538.1| 2344|Caenorhabditis elegans Hypothetical ... 29 3.4
Z80215-14|CAI79138.1| 662|Caenorhabditis elegans Hypothetical p... 29 4.5
Z80215-13|CAI79137.1| 640|Caenorhabditis elegans Hypothetical p... 29 4.5
Z80215-12|CAB02277.1| 652|Caenorhabditis elegans Hypothetical p... 29 4.5
AL023838-4|CAA19504.1| 218|Caenorhabditis elegans Hypothetical ... 28 7.9
AF098500-3|ABD94103.1| 774|Caenorhabditis elegans Temporarily a... 28 7.9
AF098500-2|AAC67399.2| 996|Caenorhabditis elegans Temporarily a... 28 7.9
>U58757-9|AAM75377.1| 503|Caenorhabditis elegans Hypothetical
protein C01B10.6b protein.
Length = 503
Score = 29.5 bits (63), Expect = 3.4
Identities = 17/41 (41%), Positives = 18/41 (43%)
Frame = +2
Query: 617 PGVSPLEAPSCALPVPTLPLTGIPVPPFLPFRXSVAPFLIA 739
PG SC P PT P PVPP P SV P +A
Sbjct: 390 PGAKSPPDQSCPKPSPTDP---TPVPPVAPTPPSVCPTTVA 427
>U58757-8|AAC47918.3| 506|Caenorhabditis elegans Hypothetical
protein C01B10.6a protein.
Length = 506
Score = 29.5 bits (63), Expect = 3.4
Identities = 17/41 (41%), Positives = 18/41 (43%)
Frame = +2
Query: 617 PGVSPLEAPSCALPVPTLPLTGIPVPPFLPFRXSVAPFLIA 739
PG SC P PT P PVPP P SV P +A
Sbjct: 393 PGAKSPPDQSCPKPSPTDP---TPVPPVAPTPPSVCPTTVA 430
>AC024772-3|AAF60538.1| 2344|Caenorhabditis elegans Hypothetical
protein Y40C5A.3 protein.
Length = 2344
Score = 29.5 bits (63), Expect = 3.4
Identities = 14/39 (35%), Positives = 19/39 (48%)
Frame = +2
Query: 635 EAPSCALPVPTLPLTGIPVPPFLPFRXSVAPFLIASPLV 751
+ P P TLP PP +PF+ APF+ P+V
Sbjct: 2054 QQPYIQRPALTLPFQQPQYPPPIPFQPRPAPFIPFQPMV 2092
>Z80215-14|CAI79138.1| 662|Caenorhabditis elegans Hypothetical
protein C36B1.12c protein.
Length = 662
Score = 29.1 bits (62), Expect = 4.5
Identities = 12/36 (33%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Frame = -1
Query: 529 KRQRRGLFTVXGLLLAFCSHVLSCV-IPLILWITVL 425
+RQ + + +A C HVL C+ +P + WI++L
Sbjct: 390 RRQPYAFILLDVINMALCMHVLKCLRLPSLKWISIL 425
>Z80215-13|CAI79137.1| 640|Caenorhabditis elegans Hypothetical
protein C36B1.12b protein.
Length = 640
Score = 29.1 bits (62), Expect = 4.5
Identities = 12/36 (33%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Frame = -1
Query: 529 KRQRRGLFTVXGLLLAFCSHVLSCV-IPLILWITVL 425
+RQ + + +A C HVL C+ +P + WI++L
Sbjct: 390 RRQPYAFILLDVINMALCMHVLKCLRLPSLKWISIL 425
>Z80215-12|CAB02277.1| 652|Caenorhabditis elegans Hypothetical
protein C36B1.12a protein.
Length = 652
Score = 29.1 bits (62), Expect = 4.5
Identities = 12/36 (33%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Frame = -1
Query: 529 KRQRRGLFTVXGLLLAFCSHVLSCV-IPLILWITVL 425
+RQ + + +A C HVL C+ +P + WI++L
Sbjct: 390 RRQPYAFILLDVINMALCMHVLKCLRLPSLKWISIL 425
>AL023838-4|CAA19504.1| 218|Caenorhabditis elegans Hypothetical
protein Y43C5A.4 protein.
Length = 218
Score = 28.3 bits (60), Expect = 7.9
Identities = 22/87 (25%), Positives = 41/87 (47%), Gaps = 1/87 (1%)
Frame = +2
Query: 440 QNQGDNAGKNM*AKGQQKAXNRKKAASLAFFHRLRPPXRASQKSTLKSEVAK-PDRTIKX 616
+++ + + K AK ++ ++K S + + P + +K+ ++E K PD K
Sbjct: 86 EDEKEKSSKRPTAKSKK---SKKATGSKKKNKKTKKPDGSEKKTQTQTEDQKAPDSPKKD 142
Query: 617 PGVSPLEAPSCALPVPTLPLTGIPVPP 697
+P AP PVP +P+ P PP
Sbjct: 143 DFFAPPGAPD---PVPAVPVEPSPAPP 166
>AF098500-3|ABD94103.1| 774|Caenorhabditis elegans Temporarily
assigned gene nameprotein 343, isoform b protein.
Length = 774
Score = 28.3 bits (60), Expect = 7.9
Identities = 19/52 (36%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Frame = +2
Query: 554 RASQKSTLKSEVAKPDRTIKXPGVS-PLEAPSCALPVPTLPLTGIPVPPFLP 706
R+S S+ KS V + +++ + V P E+P LP P LPL+ P P P
Sbjct: 43 RSSVYSSSKSTVIEVEQSSRQQQVGRPTESPP--LPPPPLPLSNPPAKPTPP 92
>AF098500-2|AAC67399.2| 996|Caenorhabditis elegans Temporarily
assigned gene nameprotein 343, isoform a protein.
Length = 996
Score = 28.3 bits (60), Expect = 7.9
Identities = 19/52 (36%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Frame = +2
Query: 554 RASQKSTLKSEVAKPDRTIKXPGVS-PLEAPSCALPVPTLPLTGIPVPPFLP 706
R+S S+ KS V + +++ + V P E+P LP P LPL+ P P P
Sbjct: 265 RSSVYSSSKSTVIEVEQSSRQQQVGRPTESPP--LPPPPLPLSNPPAKPTPP 314
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,131,824
Number of Sequences: 27780
Number of extensions: 334947
Number of successful extensions: 987
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 922
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 987
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2297313942
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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