Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP11_F_F19
         (743 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_03_1696 - 28779455-28779733,28779813-28780074,28780805-287809...    28   9.0  

>07_03_1696 - 28779455-28779733,28779813-28780074,28780805-28780956,
            28781765-28781961,28782258-28782462,28782737-28782982,
            28783603-28783719,28784206-28784397,28784480-28784693,
            28784835-28784926,28784952-28785001,28785494-28785812,
            28785908-28786068,28786407-28786650,28787212-28787467,
            28787634-28787834,28788568-28788910,28789003-28789064,
            28789645-28789851,28790170-28790978
          Length = 1535

 Score = 27.9 bits (59), Expect = 9.0
 Identities = 11/36 (30%), Positives = 24/36 (66%)
 Frame = +1

Query: 58   SDFQPLSKLTRIGH*K*IFVYQFNVRNEIQPDQHRL 165
            ++ Q +S++ R+G  K  F+++F V+N I+   ++L
Sbjct: 1420 AEAQAISRIHRVGQDKSTFIHRFIVKNTIEESIYKL 1455


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,069,934
Number of Sequences: 37544
Number of extensions: 108306
Number of successful extensions: 179
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 177
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 179
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1968901276
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)