Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP11_F_F18
(879 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT003249-1|AAO25006.1| 814|Drosophila melanogaster LD30628p pro... 31 2.8
BT001510-1|AAN71265.1| 718|Drosophila melanogaster LD41424p pro... 31 2.8
AY166755-1|AAN85717.1| 718|Drosophila melanogaster loechrig iso... 31 2.8
AY166754-1|AAN85716.1| 814|Drosophila melanogaster loechrig iso... 31 2.8
AE014297-2954|ABI31187.1| 718|Drosophila melanogaster CG17299-P... 31 2.8
AE014297-2953|AAN13854.1| 814|Drosophila melanogaster CG17299-P... 31 2.8
X58183-1|CAA41170.1| 386|Drosophila melanogaster heterogeneous ... 30 4.8
X62636-1|CAA44502.1| 326|Drosophila melanogaster hrp36.1 protein. 29 6.4
X54803-1|CAA38574.1| 386|Drosophila melanogaster Hrb87F protein. 29 6.4
X59691-1|CAA42212.1| 386|Drosophila melanogaster P11 (hnRNP pro... 29 8.5
BT012315-1|AAS77440.1| 385|Drosophila melanogaster LD32727p pro... 29 8.5
AY061421-1|AAL28969.1| 300|Drosophila melanogaster LD35248p pro... 29 8.5
AF182826-1|AAF01031.1| 300|Drosophila melanogaster cyclophilin-... 29 8.5
AE014297-1716|AAF54967.1| 385|Drosophila melanogaster CG12749-P... 29 8.5
AE014297-1715|AAN13574.1| 325|Drosophila melanogaster CG12749-P... 29 8.5
AE013599-2502|AAF57839.1| 300|Drosophila melanogaster CG4886-PA... 29 8.5
>BT003249-1|AAO25006.1| 814|Drosophila melanogaster LD30628p
protein.
Length = 814
Score = 30.7 bits (66), Expect = 2.8
Identities = 16/39 (41%), Positives = 23/39 (58%), Gaps = 3/39 (7%)
Frame = +3
Query: 570 QTLVFKQR---SGMSGDCPTQSHHS*NYVCLSFRQKSYY 677
QTLV+++R S S PT HHS + C+ R++S Y
Sbjct: 253 QTLVYERRRVSSAHSSPSPTSRHHSPVHQCMLMRRRSDY 291
>BT001510-1|AAN71265.1| 718|Drosophila melanogaster LD41424p
protein.
Length = 718
Score = 30.7 bits (66), Expect = 2.8
Identities = 16/39 (41%), Positives = 23/39 (58%), Gaps = 3/39 (7%)
Frame = +3
Query: 570 QTLVFKQR---SGMSGDCPTQSHHS*NYVCLSFRQKSYY 677
QTLV+++R S S PT HHS + C+ R++S Y
Sbjct: 157 QTLVYERRRVSSAHSSPSPTSRHHSPVHQCMLMRRRSDY 195
>AY166755-1|AAN85717.1| 718|Drosophila melanogaster loechrig
isoform IV protein.
Length = 718
Score = 30.7 bits (66), Expect = 2.8
Identities = 16/39 (41%), Positives = 23/39 (58%), Gaps = 3/39 (7%)
Frame = +3
Query: 570 QTLVFKQR---SGMSGDCPTQSHHS*NYVCLSFRQKSYY 677
QTLV+++R S S PT HHS + C+ R++S Y
Sbjct: 157 QTLVYERRRVSSAHSSPSPTSRHHSPVHQCMLMRRRSDY 195
>AY166754-1|AAN85716.1| 814|Drosophila melanogaster loechrig
isoform III protein.
Length = 814
Score = 30.7 bits (66), Expect = 2.8
Identities = 16/39 (41%), Positives = 23/39 (58%), Gaps = 3/39 (7%)
Frame = +3
Query: 570 QTLVFKQR---SGMSGDCPTQSHHS*NYVCLSFRQKSYY 677
QTLV+++R S S PT HHS + C+ R++S Y
Sbjct: 253 QTLVYERRRVSSAHSSPSPTSRHHSPVHQCMLMRRRSDY 291
>AE014297-2954|ABI31187.1| 718|Drosophila melanogaster CG17299-PL,
isoform L protein.
Length = 718
Score = 30.7 bits (66), Expect = 2.8
Identities = 16/39 (41%), Positives = 23/39 (58%), Gaps = 3/39 (7%)
Frame = +3
Query: 570 QTLVFKQR---SGMSGDCPTQSHHS*NYVCLSFRQKSYY 677
QTLV+++R S S PT HHS + C+ R++S Y
Sbjct: 157 QTLVYERRRVSSAHSSPSPTSRHHSPVHQCMLMRRRSDY 195
>AE014297-2953|AAN13854.1| 814|Drosophila melanogaster CG17299-PG,
isoform G protein.
Length = 814
Score = 30.7 bits (66), Expect = 2.8
Identities = 16/39 (41%), Positives = 23/39 (58%), Gaps = 3/39 (7%)
Frame = +3
Query: 570 QTLVFKQR---SGMSGDCPTQSHHS*NYVCLSFRQKSYY 677
QTLV+++R S S PT HHS + C+ R++S Y
Sbjct: 253 QTLVYERRRVSSAHSSPSPTSRHHSPVHQCMLMRRRSDY 291
>X58183-1|CAA41170.1| 386|Drosophila melanogaster heterogeneous
nuclear ribonucleoproteinprotein.
Length = 386
Score = 29.9 bits (64), Expect = 4.8
Identities = 28/102 (27%), Positives = 37/102 (36%), Gaps = 2/102 (1%)
Frame = +2
Query: 239 GGGKVFGTLGQNDDGLFGKAGYNREIFNDDRGQLTGQAYGTRVLGPGGD--STNYGGRLD 412
GG + G GQ D G G G+ + + G G+ G GG+ GG
Sbjct: 206 GGPRAGGRGGQGDRGQ-GGGGWGGQNRQNGGGNWGGRGGGGGFGNSGGNFGGGQGGGSGG 264
Query: 413 WANKNAQAAIDINRQIGGRSGMTASGSGVWDLDKNTHISAGG 538
W + N Q GG G G G N++ S GG
Sbjct: 265 WNQQGGTGGGPWNNQGGGNGGWNGGGGGGGYGGGNSNGSWGG 306
>X62636-1|CAA44502.1| 326|Drosophila melanogaster hrp36.1 protein.
Length = 326
Score = 29.5 bits (63), Expect = 6.4
Identities = 28/102 (27%), Positives = 36/102 (35%), Gaps = 2/102 (1%)
Frame = +2
Query: 239 GGGKVFGTLGQNDDGLFGKAGYNREIFNDDRGQLTGQAYGTRVLGPGGD--STNYGGRLD 412
GG + G GQ D G G G+ + + G G G GG+ GG
Sbjct: 206 GGPRAGGRGGQGDRGQ-GGGGWGGQNRQNGGGNWGGAGGGGGFGNSGGNFGGGQGGGSGG 264
Query: 413 WANKNAQAAIDINRQIGGRSGMTASGSGVWDLDKNTHISAGG 538
W + N Q GG G G G N++ S GG
Sbjct: 265 WNQQGGSGGGPWNNQGGGNGGWNGGGGGGGYGGGNSNGSWGG 306
>X54803-1|CAA38574.1| 386|Drosophila melanogaster Hrb87F protein.
Length = 386
Score = 29.5 bits (63), Expect = 6.4
Identities = 28/102 (27%), Positives = 36/102 (35%), Gaps = 2/102 (1%)
Frame = +2
Query: 239 GGGKVFGTLGQNDDGLFGKAGYNREIFNDDRGQLTGQAYGTRVLGPGGD--STNYGGRLD 412
GG + G GQ D G G G+ + + G G G GG+ GG
Sbjct: 206 GGPRAGGRGGQGDRGQ-GGGGWGGQNRQNGGGNWGGAGGGGGFGNSGGNFGGGQGGGSGG 264
Query: 413 WANKNAQAAIDINRQIGGRSGMTASGSGVWDLDKNTHISAGG 538
W + N Q GG G G G N++ S GG
Sbjct: 265 WNQQGGSGGGPWNNQGGGNGGWNGGGGGGGYGGGNSNGSWGG 306
>X59691-1|CAA42212.1| 386|Drosophila melanogaster P11 (hnRNP
protein) protein.
Length = 386
Score = 29.1 bits (62), Expect = 8.5
Identities = 28/102 (27%), Positives = 36/102 (35%), Gaps = 2/102 (1%)
Frame = +2
Query: 239 GGGKVFGTLGQNDDGLFGKAGYNREIFNDDRGQLTGQAYGTRVLGPGGD--STNYGGRLD 412
GG + G GQ D G G G+ + + G G G GG+ GG
Sbjct: 206 GGPRAGGRGGQGDRGQ-GGGGWGGQNRQNGGGNWGGAGGGGGFGNSGGNFGGGQGGGSGG 264
Query: 413 WANKNAQAAIDINRQIGGRSGMTASGSGVWDLDKNTHISAGG 538
W + N Q GG G G G N++ S GG
Sbjct: 265 WNQQGGTGGGPWNNQGGGNGGWNGGGGGGGYGGGNSNGSWGG 306
>BT012315-1|AAS77440.1| 385|Drosophila melanogaster LD32727p
protein.
Length = 385
Score = 29.1 bits (62), Expect = 8.5
Identities = 28/102 (27%), Positives = 37/102 (36%), Gaps = 2/102 (1%)
Frame = +2
Query: 239 GGGKVFGTLGQNDDGLFGKAGYNREIFNDDRGQLTGQAYGTRVLGPGGD--STNYGGRLD 412
GG + G GQ D G G G+ + + G G G GG+ GG
Sbjct: 206 GGPRAGGRGGQGDRGQ-GGGGWGGQNRQNGGGNWGGAGGGGGFGNSGGNFGGGQGGGSGG 264
Query: 413 WANKNAQAAIDINRQIGGRSGMTASGSGVWDLDKNTHISAGG 538
W + N Q GG G G G + N++ S GG
Sbjct: 265 WNQQGGSGGGPWNNQGGGNGGWNGGGGGGYG-GGNSNGSWGG 305
>AY061421-1|AAL28969.1| 300|Drosophila melanogaster LD35248p
protein.
Length = 300
Score = 29.1 bits (62), Expect = 8.5
Identities = 14/41 (34%), Positives = 24/41 (58%)
Frame = +2
Query: 272 NDDGLFGKAGYNREIFNDDRGQLTGQAYGTRVLGPGGDSTN 394
N++G GK+ Y ++ FND+ L ++GT + G +TN
Sbjct: 204 NNNGTGGKSIYGKK-FNDENFNLKHNSFGTLSMANSGANTN 243
>AF182826-1|AAF01031.1| 300|Drosophila melanogaster cyclophilin-33
protein.
Length = 300
Score = 29.1 bits (62), Expect = 8.5
Identities = 14/41 (34%), Positives = 24/41 (58%)
Frame = +2
Query: 272 NDDGLFGKAGYNREIFNDDRGQLTGQAYGTRVLGPGGDSTN 394
N++G GK+ Y ++ FND+ L ++GT + G +TN
Sbjct: 204 NNNGTGGKSIYGKK-FNDENFNLKHNSFGTLSMANSGANTN 243
>AE014297-1716|AAF54967.1| 385|Drosophila melanogaster CG12749-PA,
isoform A protein.
Length = 385
Score = 29.1 bits (62), Expect = 8.5
Identities = 28/102 (27%), Positives = 37/102 (36%), Gaps = 2/102 (1%)
Frame = +2
Query: 239 GGGKVFGTLGQNDDGLFGKAGYNREIFNDDRGQLTGQAYGTRVLGPGGD--STNYGGRLD 412
GG + G GQ D G G G+ + + G G G GG+ GG
Sbjct: 206 GGPRAGGRGGQGDRGQ-GGGGWGGQNRQNGGGNWGGAGGGGGFGNSGGNFGGGQGGGSGG 264
Query: 413 WANKNAQAAIDINRQIGGRSGMTASGSGVWDLDKNTHISAGG 538
W + N Q GG G G G + N++ S GG
Sbjct: 265 WNQQGGSGGGPWNNQGGGNGGWNGGGGGGYG-GGNSNGSWGG 305
>AE014297-1715|AAN13574.1| 325|Drosophila melanogaster CG12749-PB,
isoform B protein.
Length = 325
Score = 29.1 bits (62), Expect = 8.5
Identities = 28/102 (27%), Positives = 37/102 (36%), Gaps = 2/102 (1%)
Frame = +2
Query: 239 GGGKVFGTLGQNDDGLFGKAGYNREIFNDDRGQLTGQAYGTRVLGPGGD--STNYGGRLD 412
GG + G GQ D G G G+ + + G G G GG+ GG
Sbjct: 206 GGPRAGGRGGQGDRGQ-GGGGWGGQNRQNGGGNWGGAGGGGGFGNSGGNFGGGQGGGSGG 264
Query: 413 WANKNAQAAIDINRQIGGRSGMTASGSGVWDLDKNTHISAGG 538
W + N Q GG G G G + N++ S GG
Sbjct: 265 WNQQGGSGGGPWNNQGGGNGGWNGGGGGGYG-GGNSNGSWGG 305
>AE013599-2502|AAF57839.1| 300|Drosophila melanogaster CG4886-PA
protein.
Length = 300
Score = 29.1 bits (62), Expect = 8.5
Identities = 14/41 (34%), Positives = 24/41 (58%)
Frame = +2
Query: 272 NDDGLFGKAGYNREIFNDDRGQLTGQAYGTRVLGPGGDSTN 394
N++G GK+ Y ++ FND+ L ++GT + G +TN
Sbjct: 204 NNNGTGGKSIYGKK-FNDENFNLKHNSFGTLSMANSGANTN 243
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 39,953,096
Number of Sequences: 53049
Number of extensions: 958647
Number of successful extensions: 2191
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 2068
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2185
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4270708416
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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