Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP11_F_F17
         (881 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_04_0395 - 20921606-20921869,20921971-20922112,20922206-209223...    32   0.53 
01_06_1519 + 37942389-37943702,37944142-37944266,37944358-379444...    31   1.6  
12_01_0638 - 5376164-5376247,5376734-5380517,5382029-5382045           30   2.8  
03_05_0958 - 29200048-29200731                                         30   2.8  
02_01_0201 - 1347868-1347925,1348040-1348135,1348447-1348523,134...    29   4.9  
01_01_0878 + 6888459-6889227,6890498-6890523,6891679-6891843,689...    29   4.9  
08_02_1167 + 24847689-24848156                                         28   8.6  

>05_04_0395 -
           20921606-20921869,20921971-20922112,20922206-20922330,
           20922758-20923984
          Length = 585

 Score = 32.3 bits (70), Expect = 0.53
 Identities = 18/44 (40%), Positives = 26/44 (59%)
 Frame = +3

Query: 462 KSSEIPDAEAKSADIKVEEPAAQPEDSKTEVQATVAEISQEEKP 593
           K++E P AE   A+ + E  AA  E+ KTE   T  E ++EE+P
Sbjct: 129 KAAEAPAAEEPKAEAEAEAEAAATEEPKTEEPKT-EEPAKEEEP 171


>01_06_1519 +
           37942389-37943702,37944142-37944266,37944358-37944499,
           37944602-37944848,37946139-37946196,37947629-37947913,
           37947988-37948120
          Length = 767

 Score = 30.7 bits (66), Expect = 1.6
 Identities = 20/45 (44%), Positives = 26/45 (57%), Gaps = 3/45 (6%)
 Frame = +3

Query: 468 SEIPDAEAKSADIKVEEP---AAQPEDSKTEVQATVAEISQEEKP 593
           +E P AEA S + K EEP   AA  E +K E +A  A  ++E KP
Sbjct: 167 TEEPKAEASSEEAKTEEPKAEAAADEPAKEESKAEAAP-AEEAKP 210


>12_01_0638 - 5376164-5376247,5376734-5380517,5382029-5382045
          Length = 1294

 Score = 29.9 bits (64), Expect = 2.8
 Identities = 24/85 (28%), Positives = 40/85 (47%), Gaps = 4/85 (4%)
 Frame = +1

Query: 502  ILKWKNQLLSLKIQKLKYKLPSLKFHKKK----NLVLLMQXVLPTQLPSFPTWVKKIDLA 669
            +L+ + +L SLKI      L SL  H +     NL+LL        LP FP+ ++K+D+ 
Sbjct: 1165 LLQNRGKLQSLKIYSAS-SLESLPLHMRDLCSLNLLLLSGARKLQSLPDFPSSLQKLDIT 1223

Query: 670  PTVKSDAAAIPEIKTPEXADAPKLA 744
               K     +   ++PE  +   +A
Sbjct: 1224 CCCKELEEKVGVYESPEWNNISHIA 1248


>03_05_0958 - 29200048-29200731
          Length = 227

 Score = 29.9 bits (64), Expect = 2.8
 Identities = 18/52 (34%), Positives = 24/52 (46%), Gaps = 5/52 (9%)
 Frame = +1

Query: 661 DLAPTVKSDAAA-----IPEIKTPEXADAPKLADNPVNEDKPADISPDAPKA 801
           D  P +KSDA A     +P+ +TP     PKL        KPA   P  P++
Sbjct: 90  DADPLMKSDAPAPPAEKLPQPQTPTPTGTPKLQAAERKAQKPAKEPPSPPRS 141


>02_01_0201 -
           1347868-1347925,1348040-1348135,1348447-1348523,
           1349385-1349453,1349576-1349629,1350295-1350350,
           1350487-1350694,1350978-1351066,1351163-1351187
          Length = 243

 Score = 29.1 bits (62), Expect = 4.9
 Identities = 13/33 (39%), Positives = 21/33 (63%)
 Frame = -2

Query: 559 ACTSVFESSG*AAGSSTLISADFASASGISDDF 461
           +CT +F+SS  +A  +  ++A FA AS   D+F
Sbjct: 64  SCTYIFDSSDASASGAADVAATFAKASRKMDEF 96


>01_01_0878 +
           6888459-6889227,6890498-6890523,6891679-6891843,
           6892415-6892494,6893001-6893154,6893808-6893864,
           6894103-6894170,6894238-6894344,6894475-6894542,
           6894885-6895007
          Length = 538

 Score = 29.1 bits (62), Expect = 4.9
 Identities = 32/89 (35%), Positives = 41/89 (46%), Gaps = 9/89 (10%)
 Frame = -2

Query: 586 SSCEISATVACTSVFE--SSG*AAGSSTL----ISADFASASGISD---DFAXXXXXXXX 434
           SSCE S   + +S F   SSG AA +S+L     SA  AS+S   D   D A        
Sbjct: 66  SSCEASTCSSSSSAFNPGSSG-AASTSSLSAFSSSASTASSSAAGDERRDMAWLLDAFGT 124

Query: 433 XXXXXXXFAISESSGAISSFLASGIAGTS 347
                   A  E+ G   +FLA+GI G+S
Sbjct: 125 ATIDQVDSAYREAGG--DAFLAAGILGSS 151


>08_02_1167 + 24847689-24848156
          Length = 155

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 16/34 (47%), Positives = 21/34 (61%)
 Frame = +3

Query: 459 AKSSEIPDAEAKSADIKVEEPAAQPEDSKTEVQA 560
           AK  E P+AEA++A   VEE AA P +   E +A
Sbjct: 108 AKEPE-PEAEAEAAAAPVEEAAAAPVEVAEEAEA 140


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,355,199
Number of Sequences: 37544
Number of extensions: 311290
Number of successful extensions: 855
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 821
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 855
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2491484208
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)