Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP11_F_F12
         (898 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription fa...    23   3.2  
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    22   7.5  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    22   7.5  
AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein ...    22   7.5  
AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholo...    22   7.5  
AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase prot...    21   9.9  

>AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription
           factor protein.
          Length = 441

 Score = 23.0 bits (47), Expect = 3.2
 Identities = 10/16 (62%), Positives = 11/16 (68%)
 Frame = +3

Query: 849 HGSWVLPHQICRDYPA 896
           +GSW LPHQ    YPA
Sbjct: 232 YGSWFLPHQPI--YPA 245


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 21.8 bits (44), Expect = 7.5
 Identities = 7/19 (36%), Positives = 11/19 (57%)
 Frame = -1

Query: 658 PWKKMTLNXATAVXGSICL 602
           PW+++ LN    + G  CL
Sbjct: 536 PWQQLHLNKKQILGGEACL 554


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 21.8 bits (44), Expect = 7.5
 Identities = 13/47 (27%), Positives = 21/47 (44%)
 Frame = +3

Query: 162 RTRLGDAIDKTSLKILKESYNLADDKNVIASPLGVMLLLSLYESGAG 302
           +  L  A+D     +L   +NL   K+ IA P    ++L L  +  G
Sbjct: 619 KINLKHALDLDRQGLLHRQFNLPPAKDTIAVPNNGYVVLRLRANNPG 665


>AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein
           protein.
          Length = 370

 Score = 21.8 bits (44), Expect = 7.5
 Identities = 9/23 (39%), Positives = 12/23 (52%)
 Frame = +1

Query: 532 MPLISSTVGRTXRLQDTXKTPVS 600
           MPL+  T  +   L    KTP+S
Sbjct: 1   MPLLQETTPKRDMLDSQEKTPLS 23


>AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholog
           protein.
          Length = 406

 Score = 21.8 bits (44), Expect = 7.5
 Identities = 9/12 (75%), Positives = 9/12 (75%)
 Frame = -2

Query: 348 PPLPQGFPLSLP 313
           PPLPQ  PL LP
Sbjct: 175 PPLPQVPPLPLP 186


>AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase
           protein.
          Length = 590

 Score = 21.4 bits (43), Expect = 9.9
 Identities = 6/26 (23%), Positives = 15/26 (57%)
 Frame = +1

Query: 484 ICSEAXWTTLTSALRRMPLISSTVGR 561
           +  ++ W   ++ +  MPL++  +GR
Sbjct: 413 LAEDSKWRVRSAIIEYMPLLAGQLGR 438


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 175,592
Number of Sequences: 336
Number of extensions: 3295
Number of successful extensions: 12
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 24927353
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)