Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP11_F_F11
(909 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9; ... 93 9e-18
UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1; ... 92 2e-17
UniRef50_A7SXR8 Cluster: Predicted protein; n=4; cellular organi... 79 2e-13
UniRef50_O69419 Cluster: Putative uncharacterized protein; n=3; ... 59 2e-07
UniRef50_Q9KHC4 Cluster: SocE; n=1; Myxococcus xanthus|Rep: SocE... 50 8e-05
UniRef50_P03087 Cluster: Capsid protein VP1; n=1927; Polyomaviru... 45 0.002
UniRef50_A0ST23 Cluster: Putative reverse transcriptase; n=4; Ma... 42 0.016
UniRef50_Q44068 Cluster: Alpha-hemolysin; n=2; root|Rep: Alpha-h... 42 0.022
UniRef50_A7BN23 Cluster: Putative uncharacterized protein; n=1; ... 41 0.050
UniRef50_P03023 Cluster: Lactose operon repressor; n=24; Enterob... 40 0.088
UniRef50_A6NX90 Cluster: Putative uncharacterized protein; n=1; ... 35 2.5
UniRef50_Q12GC2 Cluster: Putative uncharacterized protein precur... 34 5.8
UniRef50_A2SSD8 Cluster: Putative uncharacterized protein; n=1; ... 34 5.8
>UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9;
root|Rep: Putative uncharacterized protein - Salmonella
typhimurium
Length = 127
Score = 93.1 bits (221), Expect = 9e-18
Identities = 48/68 (70%), Positives = 51/68 (75%)
Frame = +1
Query: 484 SKRPGTVKXPRCWRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLASSLVRSPGSE 663
SK+ T R RFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPL + +
Sbjct: 2 SKKQSTGTSQRRCRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLEAPSC-ALLFR 60
Query: 664 PCRLPDTC 687
PCRLPDTC
Sbjct: 61 PCRLPDTC 68
>UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1;
Escherichia coli|Rep: Putative uncharacterized protein -
Escherichia coli
Length = 147
Score = 91.9 bits (218), Expect = 2e-17
Identities = 55/107 (51%), Positives = 60/107 (56%)
Frame = +1
Query: 316 RGEAVCVLGALPLPRSLTRCARSFGCGEXXXXXXXXXXXXXXNQAITQERTCEXKASKRP 495
R +C G +PLPRSLTR ARSFGCGE + R K RP
Sbjct: 26 RVSRICDTGDIPLPRSLTRYARSFGCGERYRLTDGD------GNFLEDTRKTLSKEEIRP 79
Query: 496 GTVKXPRCWRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLAS 636
R RFSIGSAPLTSI K DAQ+ GGETRQDYKD RRFPL +
Sbjct: 80 ------RRSRFSIGSAPLTSIAKSDAQISGGETRQDYKDPRRFPLVA 120
>UniRef50_A7SXR8 Cluster: Predicted protein; n=4; cellular
organisms|Rep: Predicted protein - Nematostella
vectensis
Length = 97
Score = 79.0 bits (186), Expect = 2e-13
Identities = 37/45 (82%), Positives = 40/45 (88%)
Frame = +1
Query: 502 VKXPRCWRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLAS 636
V+ PR RFSIGSAPLTSITK DAQ+ GGETRQDYKDTRRFPLA+
Sbjct: 44 VRGPRQSRFSIGSAPLTSITKSDAQISGGETRQDYKDTRRFPLAA 88
>UniRef50_O69419 Cluster: Putative uncharacterized protein; n=3;
root|Rep: Putative uncharacterized protein - Escherichia
coli
Length = 61
Score = 58.8 bits (136), Expect = 2e-07
Identities = 28/38 (73%), Positives = 28/38 (73%)
Frame = -1
Query: 492 PFAGLXLTCSFLRYRLILWITVLPPLSELIPLAAAERP 379
P LTCSF Y LILWITVLPPLSEL PLAA ERP
Sbjct: 19 PVLCFLLTCSFRLYPLILWITVLPPLSELTPLAAVERP 56
>UniRef50_Q9KHC4 Cluster: SocE; n=1; Myxococcus xanthus|Rep: SocE -
Myxococcus xanthus
Length = 486
Score = 50.0 bits (114), Expect = 8e-05
Identities = 24/35 (68%), Positives = 25/35 (71%)
Frame = +1
Query: 292 CINESANARGEAVCVLGALPLPRSLTRCARSFGCG 396
CI + A AR EAV VL ALPL RS TRC RS GCG
Sbjct: 266 CIRDPATARSEAVWVLVALPLLRSRTRCVRSVGCG 300
>UniRef50_P03087 Cluster: Capsid protein VP1; n=1927;
Polyomavirus|Rep: Capsid protein VP1 - Simian virus 40
(SV40)
Length = 364
Score = 45.2 bits (102), Expect = 0.002
Identities = 19/19 (100%), Positives = 19/19 (100%)
Frame = +1
Query: 94 DPDMIRYIDEFGQTTTRMQ 150
DPDMIRYIDEFGQTTTRMQ
Sbjct: 346 DPDMIRYIDEFGQTTTRMQ 364
>UniRef50_A0ST23 Cluster: Putative reverse transcriptase; n=4;
Magnoliophyta|Rep: Putative reverse transcriptase -
Zingiber officinale (Ginger)
Length = 49
Score = 42.3 bits (95), Expect = 0.016
Identities = 22/41 (53%), Positives = 26/41 (63%)
Frame = +2
Query: 218 INKLTTTIAFILCFRFRAEVWEVFSALMNRPTRGERRFAYW 340
+++LT L RF V +ALMNRPTRGERRFAYW
Sbjct: 1 MSELTHINCVALTARFPVGKPVVPAALMNRPTRGERRFAYW 41
>UniRef50_Q44068 Cluster: Alpha-hemolysin; n=2; root|Rep:
Alpha-hemolysin - Aeromonas hydrophila
Length = 59
Score = 41.9 bits (94), Expect = 0.022
Identities = 19/20 (95%), Positives = 19/20 (95%)
Frame = +3
Query: 411 HSKAVIXLSTESGDNAGKNM 470
HSKAVI LSTESGDNAGKNM
Sbjct: 40 HSKAVIRLSTESGDNAGKNM 59
>UniRef50_A7BN23 Cluster: Putative uncharacterized protein; n=1;
Beggiatoa sp. SS|Rep: Putative uncharacterized protein -
Beggiatoa sp. SS
Length = 114
Score = 40.7 bits (91), Expect = 0.050
Identities = 23/65 (35%), Positives = 31/65 (47%)
Frame = +1
Query: 442 NQAITQERTCEXKASKRPGTVKXPRCWRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRR 621
N I +R + + P T F S PLT+ITKI Q + +T+ +YK T
Sbjct: 41 NHKIMHQRALIRNSPQTPRTYNYTLSSLFPYNSPPLTTITKIYPQFKNTQTQHNYKYTTP 100
Query: 622 FPLAS 636
FPL S
Sbjct: 101 FPLQS 105
>UniRef50_P03023 Cluster: Lactose operon repressor; n=24;
Enterobacteriaceae|Rep: Lactose operon repressor -
Escherichia coli (strain K12)
Length = 360
Score = 39.9 bits (89), Expect = 0.088
Identities = 19/24 (79%), Positives = 21/24 (87%)
Frame = -2
Query: 362 ERGSGRAPNTQTASPRALADSLMQ 291
+R + APNTQTASPRALADSLMQ
Sbjct: 325 KRKTTLAPNTQTASPRALADSLMQ 348
>UniRef50_A6NX90 Cluster: Putative uncharacterized protein; n=1;
Bacteroides capillosus ATCC 29799|Rep: Putative
uncharacterized protein - Bacteroides capillosus ATCC
29799
Length = 37
Score = 35.1 bits (77), Expect = 2.5
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = +3
Query: 663 TLPLTGYLSAFLPSG 707
TLPLTGYLSAFLPSG
Sbjct: 7 TLPLTGYLSAFLPSG 21
>UniRef50_Q12GC2 Cluster: Putative uncharacterized protein
precursor; n=2; Polaromonas|Rep: Putative
uncharacterized protein precursor - Polaromonas sp.
(strain JS666 / ATCC BAA-500)
Length = 268
Score = 33.9 bits (74), Expect = 5.8
Identities = 16/44 (36%), Positives = 26/44 (59%), Gaps = 3/44 (6%)
Frame = -1
Query: 501 GSWPFAGLXLTCSFLRYR---LILWITVLPPLSELIPLAAAERP 379
G W +G L L++ LI+W+ LPPL++ IP+A+ + P
Sbjct: 158 GVWLSSGNALPWGLLQFGGMGLIVWLACLPPLADEIPMASGDSP 201
>UniRef50_A2SSD8 Cluster: Putative uncharacterized protein; n=1;
Methanocorpusculum labreanum Z|Rep: Putative
uncharacterized protein - Methanocorpusculum labreanum
(strain ATCC 43576 / DSM 4855 / Z)
Length = 109
Score = 33.9 bits (74), Expect = 5.8
Identities = 21/55 (38%), Positives = 28/55 (50%)
Frame = -1
Query: 252 KMNAIVVVNLFIAAYNGYK*SNSITNFTNKAFFSLHSSCGLSKLINVSYHVWIQL 88
+MNA V + FIAA + +T + AFF L S G ++VSY VW L
Sbjct: 27 RMNAWVDLAAFIAAV-----ATCVTGYVLWAFFPLGSGRGAMNFLDVSYQVWYDL 76
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 741,352,206
Number of Sequences: 1657284
Number of extensions: 13400306
Number of successful extensions: 35017
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 33596
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 35006
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 82801539422
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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