Bombyx BLAST Result against spombe

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP11_F_F10
         (874 letters)

Database: spombe 
           5004 sequences; 2,362,478 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SPCC417.12 |||carboxylesterase-lipase family |Schizosaccharomyce...    62   1e-10
SPAC1039.03 |||esterase/lipase |Schizosaccharomyces pombe|chr 1|...    53   6e-08
SPAPB1A11.02 |||esterase/lipase |Schizosaccharomyces pombe|chr 1...    33   0.040
SPBC1289.01c |chr4|cfh3, SPBC1539.11c|chitin synthase regulatory...    28   2.0  
SPBC19C2.07 |fba1||fructose-bisphosphate aldolase Fba1|Schizosac...    26   6.1  
SPAC6F12.16c |mtr4||ATP-dependent RNA helicase, TRAMP complex su...    26   6.1  
SPBC16D10.05 |mok13||alpha-1,3-glucan synthase Mok13|Schizosacch...    26   8.1  

>SPCC417.12 |||carboxylesterase-lipase family |Schizosaccharomyces
           pombe|chr 3|||Manual
          Length = 520

 Score = 62.1 bits (144), Expect = 1e-10
 Identities = 42/120 (35%), Positives = 58/120 (48%), Gaps = 12/120 (10%)
 Frame = +3

Query: 312 QQCLTLNIYVPENANATQTVPVFVWFHGGGFKIGNAGEY---GGKHLTQHG----IIVVT 470
           + CL LNI+VP      +  PV  + HGG  ++GN   Y     + L   G     I+V+
Sbjct: 80  EDCLFLNIWVPAGEKPAEGWPVLYFIHGGWLQVGNPLHYRQCDPQDLQADGSPAKFILVS 139

Query: 471 VNYRLGPYGFLC---LDEEVP--GNQXLKDQVTALKWVQANIGDFGGDKSKVTIGGQSYG 635
             +RL  +GFL    L EE P   N    DQ   L+W   +I  FGG+K  + +GG S G
Sbjct: 140 PGHRLNLFGFLAGKELLEEDPKSSNFGFWDQRLGLEWTYKHIESFGGNKENIAVGGISAG 199


>SPAC1039.03 |||esterase/lipase |Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 341

 Score = 52.8 bits (121), Expect = 6e-08
 Identities = 36/115 (31%), Positives = 54/115 (46%), Gaps = 5/115 (4%)
 Frame = +3

Query: 372 PVFVWFHGGGFKIGNAGEYG--GKHLTQHG-IIVVTVNYRLGPYGFLCLDEEVPGNQXLK 542
           P F+WFHGGG+ +GN         H+ +    +VV V+YRL P        E P    + 
Sbjct: 101 PCFLWFHGGGWVLGNINTENSFATHMCEQAKCVVVNVDYRLAP--------EDPFPACID 152

Query: 543 DQVTALKWVQANIGDFGGDKSKVTIGGQSYGG--GAVDLHMYSSDVKLFDKVIIQ 701
           D   AL +   N    G + +K+ +GG S GG   AV  H  ++    F  +++Q
Sbjct: 153 DGWEALLYCYENADTLGINPNKIAVGGSSAGGNIAAVLSHKVAASPANFPPLVLQ 207


>SPAPB1A11.02 |||esterase/lipase |Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 339

 Score = 33.5 bits (73), Expect = 0.040
 Identities = 28/97 (28%), Positives = 46/97 (47%), Gaps = 4/97 (4%)
 Frame = +3

Query: 375 VFVWFHGGGFKIGNAGEYGG--KHLT-QHGIIVVTVNYRLGPYGFLCLDEEVPGNQXLKD 545
           + V++H  G+ +    +     K LT + G + V+V+YRL P      + + P      D
Sbjct: 92  LMVFYHSSGWCMRGVRDDDSLFKILTPKFGCVCVSVDYRLAP------ESKFPVAH--ND 143

Query: 546 QVTALKWVQANIGDFGGD-KSKVTIGGQSYGGGAVDL 653
            + + KWV +NI   G + K    +GG S GG  V +
Sbjct: 144 AIDSFKWVASNIEKLGANPKRGFFLGGASAGGNFVSV 180


>SPBC1289.01c |chr4|cfh3, SPBC1539.11c|chitin synthase regulatory
           factor |Schizosaccharomyces pombe|chr 2|||Manual
          Length = 633

 Score = 27.9 bits (59), Expect = 2.0
 Identities = 14/45 (31%), Positives = 23/45 (51%), Gaps = 3/45 (6%)
 Frame = -1

Query: 433 PPYSPAF---PILKPPPWNQTKTGTV*VALAFSGTYILRVRHCCV 308
           PP++PA    P+   PP +QTK   V V    S  ++++   C +
Sbjct: 588 PPHAPAVSSTPVTSAPPVSQTKVTKVSVPKKTSKKFLIKHNKCII 632


>SPBC19C2.07 |fba1||fructose-bisphosphate aldolase
           Fba1|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 358

 Score = 26.2 bits (55), Expect = 6.1
 Identities = 11/21 (52%), Positives = 11/21 (52%)
 Frame = +3

Query: 336 YVPENANATQTVPVFVWFHGG 398
           YV E    T   PVF  FHGG
Sbjct: 246 YVKEQLKTTNDKPVFFVFHGG 266


>SPAC6F12.16c |mtr4||ATP-dependent RNA helicase, TRAMP complex
           subunit Mtr4|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 1117

 Score = 26.2 bits (55), Expect = 6.1
 Identities = 11/38 (28%), Positives = 21/38 (55%)
 Frame = +3

Query: 378 FVWFHGGGFKIGNAGEYGGKHLTQHGIIVVTVNYRLGP 491
           F W  GG + I  +G  G + L   GI+++ ++ ++ P
Sbjct: 577 FRWISGGEY-IQMSGRAGRRGLDDRGIVILMIDEKMDP 613


>SPBC16D10.05 |mok13||alpha-1,3-glucan synthase
            Mok13|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 2358

 Score = 25.8 bits (54), Expect = 8.1
 Identities = 21/62 (33%), Positives = 28/62 (45%), Gaps = 3/62 (4%)
 Frame = +3

Query: 405  KIGNAG---EYGGKHLTQHGIIVVTVNYRLGPYGFLCLDEEVPGNQXLKDQVTALKWVQA 575
            KIG  G   E  GKHLT H +I V    R+G   +    E  P    + DQV  ++    
Sbjct: 1158 KIGGLGVMAELMGKHLTHHDLIWVVP--RVGDVNYPDGQELAPLEVVVLDQVYEVRVYSH 1215

Query: 576  NI 581
            N+
Sbjct: 1216 NL 1217


  Database: spombe
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 2,362,478
  Number of sequences in database:  5004
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,611,999
Number of Sequences: 5004
Number of extensions: 78257
Number of successful extensions: 215
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 208
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 213
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 436477420
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)