Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP11_F_F08
         (864 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_06_1291 + 36032088-36032299,36032737-36033314,36034494-36036229     33   0.39 
01_05_0439 - 22159425-22159520,22160137-22160345,22161028-221610...    30   2.7  
11_05_0068 - 18782658-18782984,18784634-18784783,18784853-187857...    29   3.6  

>01_06_1291 + 36032088-36032299,36032737-36033314,36034494-36036229
          Length = 841

 Score = 32.7 bits (71), Expect = 0.39
 Identities = 18/53 (33%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
 Frame = +2

Query: 617 IT*ALLKNAQKLMR*PSWYREIPRRVFHTDTRKHG--GITDQVHAPKTLLATP 769
           +T  +LK A++  R P+W  E  R   +   ++HG  G+T+  H P T L+ P
Sbjct: 46  VTAIVLKPARRKGRIPNWEEEGDREGTYWTVQRHGGQGLTNSRHPPTTPLSPP 98


>01_05_0439 -
           22159425-22159520,22160137-22160345,22161028-22161066,
           22161196-22161356,22161447-22161518,22162002-22162183,
           22162580-22162703,22164196-22164299,22165526-22165725,
           22165838-22166069,22166156-22166239,22166329-22166386,
           22166724-22166771,22167924-22168081,22168451-22168501,
           22168585-22168658,22168760-22168835,22169685-22169729,
           22169833-22169899,22169978-22170095,22170580-22170775,
           22171551-22171640,22171985-22172039,22172755-22172975,
           22173362-22173454,22173608-22173721,22173918-22173981,
           22174081-22174181,22174306-22174447,22174528-22174729,
           22174883-22174976,22176172-22176348
          Length = 1248

 Score = 29.9 bits (64), Expect = 2.7
 Identities = 18/60 (30%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
 Frame = +1

Query: 301 IEEAKPNGALDEVF-KKYCDKSAQLKGCISSVLQGVRPCVGNDYANHINDAQNSTNQLID 477
           I+ A P+G   + F KK    + Q    +S ++Q +      DY    N+A+ +TN L+D
Sbjct: 421 IDNASPSGFNTQAFLKKRSRATNQPVESMSMIMQFIETQGFLDYLERCNNAEENTNNLLD 480


>11_05_0068 -
           18782658-18782984,18784634-18784783,18784853-18785716,
           18785877-18786005,18786112-18786188,18786507-18786607,
           18786772-18786896
          Length = 590

 Score = 29.5 bits (63), Expect = 3.6
 Identities = 15/46 (32%), Positives = 25/46 (54%), Gaps = 2/46 (4%)
 Frame = +1

Query: 556 ENLKTCFLNLK--QSFPTVESANNLSLVEKCAKVDEMTLLVS*NPS 687
           E+LK CF+NL+   +F  + S   L L   C   +++  L+S  P+
Sbjct: 283 EHLKLCFMNLRPLPTFSGLRSLKTLDLALVCITTEDLESLLSYTPA 328


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,060,834
Number of Sequences: 37544
Number of extensions: 458988
Number of successful extensions: 1095
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1062
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1095
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2420970504
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)