Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP11_F_F07
         (782 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY531877-1|AAT08872.1|  247|Tribolium castaneum ORF1p protein.         23   3.6  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    23   3.6  
AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    22   6.4  

>AY531877-1|AAT08872.1|  247|Tribolium castaneum ORF1p protein.
          Length = 247

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 8/21 (38%), Positives = 14/21 (66%)
 Frame = +3

Query: 234 TKRNEHFQPRTRR*AESDQRH 296
           T+RN +++PRT R     ++H
Sbjct: 227 TRRNPYYRPRTSRTEPPRRKH 247


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like protein
            protein.
          Length = 1156

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 14/31 (45%), Positives = 14/31 (45%)
 Frame = -1

Query: 245  VALGGTARRPVLGGSGSESKMLVWPPXGGAE 153
            V L GTA  P  G SG  S     PP  G E
Sbjct: 1104 VPLKGTAVPPPSGSSGPGSTGSKSPPVAGFE 1134


>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 8/24 (33%), Positives = 16/24 (66%)
 Frame = -3

Query: 726 NXILASXADNTTLIISKGXIRKHT 655
           N ++ S  +NT L+++K  + KH+
Sbjct: 18  NYLILSNKNNTYLVLNKYLLVKHS 41


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 150,556
Number of Sequences: 336
Number of extensions: 2768
Number of successful extensions: 6
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21168876
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)