Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP11_F_F07
         (782 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB065600-1|BAC05828.1|  727|Homo sapiens seven transmembrane hel...    33   0.88 
BC052950-1|AAH52950.1| 1008|Homo sapiens G protein regulated ind...    31   6.2  
AL834165-1|CAD38868.1|  707|Homo sapiens hypothetical protein pr...    31   6.2  
AK055979-1|BAB71063.1|  710|Homo sapiens protein ( Homo sapiens ...    31   6.2  
AB067480-1|BAB67786.1|  800|Homo sapiens KIAA1893 protein protein.     31   6.2  
AF317634-1|AAL26903.1|  616|Homo sapiens HRD1 protein.                 30   8.2  
AB085847-1|BAC24801.1|  616|Homo sapiens HRD1 protein.                 30   8.2  
AB058713-1|BAB47439.1|  579|Homo sapiens KIAA1810 protein protein.     30   8.2  

>AB065600-1|BAC05828.1|  727|Homo sapiens seven transmembrane helix
           receptor protein.
          Length = 727

 Score = 33.5 bits (73), Expect = 0.88
 Identities = 16/43 (37%), Positives = 22/43 (51%), Gaps = 2/43 (4%)
 Frame = -1

Query: 278 GSSPCPWLKVLVALG--GTARRPVLGGSGSESKMLVWPPXGGA 156
           GS  CPW  +L+     G    P+L  + + + MLV PP G A
Sbjct: 243 GSERCPWASLLLPCSACGAVPSPLLSSASARNAMLVVPPGGRA 285


>BC052950-1|AAH52950.1| 1008|Homo sapiens G protein regulated
           inducer of neurite outgrowth 1 protein.
          Length = 1008

 Score = 30.7 bits (66), Expect = 6.2
 Identities = 19/58 (32%), Positives = 28/58 (48%), Gaps = 2/58 (3%)
 Frame = +1

Query: 160 PPXGGHTNIFDSEPEPPRTGRRAVPPSATST--FSHGQGDEPKATNGTSVATNGQSTP 327
           P   G TN   S P  PR+   A PPSA      + G+GD P ++    +  +G++ P
Sbjct: 481 PESSGKTNPVSSGPGDPRSLGTAGPPSAVKAEPATGGKGD-PLSSEKAGLVASGKAAP 537


>AL834165-1|CAD38868.1|  707|Homo sapiens hypothetical protein
           protein.
          Length = 707

 Score = 30.7 bits (66), Expect = 6.2
 Identities = 19/58 (32%), Positives = 28/58 (48%), Gaps = 2/58 (3%)
 Frame = +1

Query: 160 PPXGGHTNIFDSEPEPPRTGRRAVPPSATST--FSHGQGDEPKATNGTSVATNGQSTP 327
           P   G TN   S P  PR+   A PPSA      + G+GD P ++    +  +G++ P
Sbjct: 291 PESSGKTNPVSSGPGDPRSLGTAGPPSAVKAEPATGGKGD-PLSSEKAGLVASGKAAP 347


>AK055979-1|BAB71063.1|  710|Homo sapiens protein ( Homo sapiens
           cDNA FLJ31417 fis, clone NT2NE2000327, weakly similar to
           GLUCOAMYLASE S1/S2 PRECURSOR (EC 3.2.1.3). ).
          Length = 710

 Score = 30.7 bits (66), Expect = 6.2
 Identities = 17/66 (25%), Positives = 27/66 (40%)
 Frame = +1

Query: 130 SSSIKQGCSAPPXGGHTNIFDSEPEPPRTGRRAVPPSATSTFSHGQGDEPKATNGTSVAT 309
           +S +    +A P   H      +  PP T   A+PP+  +T S  +   P  T   + AT
Sbjct: 226 TSQLPNAATAQPAVQHIIHQPIQSRPPVTTSNAIPPAVVATVSATRAQSPVITTTAAHAT 285

Query: 310 NGQSTP 327
           +    P
Sbjct: 286 DSALRP 291


>AB067480-1|BAB67786.1|  800|Homo sapiens KIAA1893 protein protein.
          Length = 800

 Score = 30.7 bits (66), Expect = 6.2
 Identities = 19/58 (32%), Positives = 28/58 (48%), Gaps = 2/58 (3%)
 Frame = +1

Query: 160 PPXGGHTNIFDSEPEPPRTGRRAVPPSATST--FSHGQGDEPKATNGTSVATNGQSTP 327
           P   G TN   S P  PR+   A PPSA      + G+GD P ++    +  +G++ P
Sbjct: 483 PESSGKTNPVSSGPGDPRSLGTAGPPSAVKAEPATGGKGD-PLSSEKAGLVASGKAAP 539


>AF317634-1|AAL26903.1|  616|Homo sapiens HRD1 protein.
          Length = 616

 Score = 30.3 bits (65), Expect = 8.2
 Identities = 16/46 (34%), Positives = 20/46 (43%)
 Frame = +1

Query: 187 FDSEPEPPRTGRRAVPPSATSTFSHGQGDEPKATNGTSVATNGQST 324
           F   P PP +G    PPS ++  S   G       GTS AT   +T
Sbjct: 391 FPPVPPPPSSGEAVAPPSTSAALSRPSGAATTTAAGTS-ATAASAT 435


>AB085847-1|BAC24801.1|  616|Homo sapiens HRD1 protein.
          Length = 616

 Score = 30.3 bits (65), Expect = 8.2
 Identities = 16/46 (34%), Positives = 20/46 (43%)
 Frame = +1

Query: 187 FDSEPEPPRTGRRAVPPSATSTFSHGQGDEPKATNGTSVATNGQST 324
           F   P PP +G    PPS ++  S   G       GTS AT   +T
Sbjct: 391 FPPVPPPPSSGEAVAPPSTSAALSRPSGAATTTAAGTS-ATAASAT 435


>AB058713-1|BAB47439.1|  579|Homo sapiens KIAA1810 protein protein.
          Length = 579

 Score = 30.3 bits (65), Expect = 8.2
 Identities = 16/46 (34%), Positives = 20/46 (43%)
 Frame = +1

Query: 187 FDSEPEPPRTGRRAVPPSATSTFSHGQGDEPKATNGTSVATNGQST 324
           F   P PP +G    PPS ++  S   G       GTS AT   +T
Sbjct: 354 FPPVPPPPSSGEAVAPPSTSAALSRPSGAATTTAAGTS-ATAASAT 398


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 97,480,217
Number of Sequences: 237096
Number of extensions: 1895893
Number of successful extensions: 5110
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 4717
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5091
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9534535578
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)