Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP11_F_F07
         (782 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC024136-3|AAF35959.2|  470|Caenorhabditis elegans Hypothetical ...    32   0.53 
Z81475-11|CAB03915.1| 1820|Caenorhabditis elegans Hypothetical p...    31   1.2  
AL032627-23|CAA21551.1| 1820|Caenorhabditis elegans Hypothetical...    31   1.2  
AF003151-19|AAK18922.1|  988|Caenorhabditis elegans Hypothetical...    28   6.6  

>AC024136-3|AAF35959.2|  470|Caenorhabditis elegans Hypothetical
           protein F54A3.6 protein.
          Length = 470

 Score = 31.9 bits (69), Expect = 0.53
 Identities = 17/51 (33%), Positives = 25/51 (49%)
 Frame = +1

Query: 160 PPXGGHTNIFDSEPEPPRTGRRAVPPSATSTFSHGQGDEPKATNGTSVATN 312
           PP  G+   F + P  P +    VPP A S F    G +P  T+ T+ ++N
Sbjct: 326 PPSAGY--FFQAPPPAPASSSSTVPP-AVSPFGVPLGAQPSTTSSTTYSSN 373


>Z81475-11|CAB03915.1| 1820|Caenorhabditis elegans Hypothetical
            protein C24H11.7 protein.
          Length = 1820

 Score = 30.7 bits (66), Expect = 1.2
 Identities = 21/70 (30%), Positives = 31/70 (44%), Gaps = 1/70 (1%)
 Frame = +1

Query: 103  TIQRWPQ*RSSSIKQGCSAPPXGGHTNIFDSEPEPPR-TGRRAVPPSATSTFSHGQGDEP 279
            T++R  +     IK     PP  G      SEP+    +G    PPS+ ST +    D  
Sbjct: 1717 TVERLNKFMPELIKDTIPNPPRPGQQQSEASEPKKEHASGLEPPPPSSNSTAATSTSDPS 1776

Query: 280  KATNGTSVAT 309
             AT  +S++T
Sbjct: 1777 IATAQSSIST 1786


>AL032627-23|CAA21551.1| 1820|Caenorhabditis elegans Hypothetical
            protein C24H11.7 protein.
          Length = 1820

 Score = 30.7 bits (66), Expect = 1.2
 Identities = 21/70 (30%), Positives = 31/70 (44%), Gaps = 1/70 (1%)
 Frame = +1

Query: 103  TIQRWPQ*RSSSIKQGCSAPPXGGHTNIFDSEPEPPR-TGRRAVPPSATSTFSHGQGDEP 279
            T++R  +     IK     PP  G      SEP+    +G    PPS+ ST +    D  
Sbjct: 1717 TVERLNKFMPELIKDTIPNPPRPGQQQSEASEPKKEHASGLEPPPPSSNSTAATSTSDPS 1776

Query: 280  KATNGTSVAT 309
             AT  +S++T
Sbjct: 1777 IATAQSSIST 1786


>AF003151-19|AAK18922.1|  988|Caenorhabditis elegans Hypothetical
           protein D1007.7 protein.
          Length = 988

 Score = 28.3 bits (60), Expect = 6.6
 Identities = 15/41 (36%), Positives = 18/41 (43%)
 Frame = +1

Query: 148 GCSAPPXGGHTNIFDSEPEPPRTGRRAVPPSATSTFSHGQG 270
           G   PP G       S P PPR G   +PP    +F  G+G
Sbjct: 754 GAPPPPFGRGAGPMSSFPPPPRGGMHHMPP--PPSFRGGRG 792


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,791,713
Number of Sequences: 27780
Number of extensions: 274283
Number of successful extensions: 729
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 669
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 729
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1893203640
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)