Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP11_F_F02
(848 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z92831-7|CAB07369.2| 2396|Caenorhabditis elegans Hypothetical pr... 31 0.78
Z81066-8|CAB02974.2| 2396|Caenorhabditis elegans Hypothetical pr... 31 0.78
AC024810-19|AAF60770.1| 427|Caenorhabditis elegans Hypothetical... 30 2.4
Z81066-1|CAB02970.1| 919|Caenorhabditis elegans Hypothetical pr... 29 5.5
U13072-7|AAK31398.2| 382|Caenorhabditis elegans Nematode astaci... 29 5.5
U88170-4|AAB42245.2| 425|Caenorhabditis elegans Hypothetical pr... 28 7.3
Z68338-5|CAA92758.1| 203|Caenorhabditis elegans Hypothetical pr... 28 9.6
Z46791-5|CAA86755.2| 948|Caenorhabditis elegans Hypothetical pr... 28 9.6
U78953-1|AAB38323.1| 185|Caenorhabditis elegans basic helix-loo... 28 9.6
>Z92831-7|CAB07369.2| 2396|Caenorhabditis elegans Hypothetical
protein F22G12.5 protein.
Length = 2396
Score = 31.5 bits (68), Expect = 0.78
Identities = 35/110 (31%), Positives = 48/110 (43%), Gaps = 7/110 (6%)
Frame = -1
Query: 383 LPLPPTR-NEGPMSQYCKASMWL-----VWIFRTSSSQPASVLQKGVTVCWTMTRLTGRA 222
L LPPT N + C+ L ++ SSS P +V + TV ++TRL G
Sbjct: 620 LQLPPTTVNHRDLWIVCRVDRILSADTAAELYMKSSSDPKAVAKLQKTVSMSLTRLAGHR 679
Query: 221 RYDTCTGIKPSHCFLLTTSQSAAISVRSE-LRASASTTAEWRRAMSRSGA 75
+ T KP L + S S S L +S ST + W S+SGA
Sbjct: 680 QRFAWTA-KPLFPELRSNHSSTISSTTSPMLSSSTSTLSGW----SKSGA 724
>Z81066-8|CAB02974.2| 2396|Caenorhabditis elegans Hypothetical
protein F22G12.5 protein.
Length = 2396
Score = 31.5 bits (68), Expect = 0.78
Identities = 35/110 (31%), Positives = 48/110 (43%), Gaps = 7/110 (6%)
Frame = -1
Query: 383 LPLPPTR-NEGPMSQYCKASMWL-----VWIFRTSSSQPASVLQKGVTVCWTMTRLTGRA 222
L LPPT N + C+ L ++ SSS P +V + TV ++TRL G
Sbjct: 620 LQLPPTTVNHRDLWIVCRVDRILSADTAAELYMKSSSDPKAVAKLQKTVSMSLTRLAGHR 679
Query: 221 RYDTCTGIKPSHCFLLTTSQSAAISVRSE-LRASASTTAEWRRAMSRSGA 75
+ T KP L + S S S L +S ST + W S+SGA
Sbjct: 680 QRFAWTA-KPLFPELRSNHSSTISSTTSPMLSSSTSTLSGW----SKSGA 724
>AC024810-19|AAF60770.1| 427|Caenorhabditis elegans Hypothetical
protein Y54E10A.16a protein.
Length = 427
Score = 29.9 bits (64), Expect = 2.4
Identities = 17/60 (28%), Positives = 26/60 (43%)
Frame = -3
Query: 279 RPAEGCDCVLDDDEAHGPRQVRHVHRDQTVPLLFTDDVAIGCYFCEKRAESEREYNCRVE 100
RP G +LD+ E GP +V +V+ D + D +G F + CRV+
Sbjct: 97 RPDRGKFTILDNAEVAGPEEVLNVNFDSEILQRIFSDPKLGIQFLARYGLIPNTRVCRVQ 156
>Z81066-1|CAB02970.1| 919|Caenorhabditis elegans Hypothetical
protein F17B5.2 protein.
Length = 919
Score = 28.7 bits (61), Expect = 5.5
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = +2
Query: 23 TTREFLRFXLPAC*RAGTRRSSTW 94
T R+++ F P C AGT+ S W
Sbjct: 415 TVRDYVNFYTPTCKYAGTKNSERW 438
>U13072-7|AAK31398.2| 382|Caenorhabditis elegans Nematode astacin
protease protein 7 protein.
Length = 382
Score = 28.7 bits (61), Expect = 5.5
Identities = 13/40 (32%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Frame = -1
Query: 299 SSSQPASVLQKGVTVC-WTMTRLTGRARYDTCTGIKPSHC 183
+S++P+S + +TVC WT R A Y + + P C
Sbjct: 340 NSNKPSSQCEDRITVCWWTADRCRSPAIYQVMSSLCPKTC 379
>U88170-4|AAB42245.2| 425|Caenorhabditis elegans Hypothetical
protein C10G11.6 protein.
Length = 425
Score = 28.3 bits (60), Expect = 7.3
Identities = 16/55 (29%), Positives = 29/55 (52%)
Frame = -1
Query: 425 VCAPTCSQPEPSYTLPLPPTRNEGPMSQYCKASMWLVWIFRTSSSQPASVLQKGV 261
+ +P +P PS ++PLPP + P S Y ++ + ++S+S S L K +
Sbjct: 172 IVSPDVRRPPPSLSIPLPP-MHIPPPSVYFISTPSIYSTAKSSTSTVTSKLSKAI 225
>Z68338-5|CAA92758.1| 203|Caenorhabditis elegans Hypothetical
protein T24B8.6 protein.
Length = 203
Score = 27.9 bits (59), Expect = 9.6
Identities = 20/60 (33%), Positives = 28/60 (46%), Gaps = 1/60 (1%)
Frame = -1
Query: 455 TPMDLELYP*-VCAPTCSQPEPSYTLPLPPTRNEGPMSQYCKASMWLVWIFRTSSSQPAS 279
TP +YP VC+ P PSYT P P +Q+ +S + ++ SSS AS
Sbjct: 133 TPEQSPVYPQSVCSMMAQTPSPSYTSPYYPPPQMMSSNQHDMSSHY----YQESSSSSAS 188
>Z46791-5|CAA86755.2| 948|Caenorhabditis elegans Hypothetical
protein C09G5.6 protein.
Length = 948
Score = 27.9 bits (59), Expect = 9.6
Identities = 20/56 (35%), Positives = 24/56 (42%)
Frame = +3
Query: 153 SSRLRRRQ*KAMGRFDPGARVVPGAAREPRHRPAHSHTLLQDGRWLRGARAEYPDQ 320
SSR R+ + M R G R P AA +RP H GR +R YP Q
Sbjct: 123 SSRPRKPEPPTMPRTIQGFRAPPPAATST-YRPPHGSNYDNYGREPASSRRPYPPQ 177
>U78953-1|AAB38323.1| 185|Caenorhabditis elegans basic
helix-loop-helix DNA bindingprotein HLH-3 protein.
Length = 185
Score = 27.9 bits (59), Expect = 9.6
Identities = 20/60 (33%), Positives = 28/60 (46%), Gaps = 1/60 (1%)
Frame = -1
Query: 455 TPMDLELYP*-VCAPTCSQPEPSYTLPLPPTRNEGPMSQYCKASMWLVWIFRTSSSQPAS 279
TP +YP VC+ P PSYT P P +Q+ +S + ++ SSS AS
Sbjct: 100 TPEQSPVYPQSVCSMMAQTPSPSYTSPYYPPPQMMSSNQHDMSSHY----YQESSSSSAS 155
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,964,444
Number of Sequences: 27780
Number of extensions: 331653
Number of successful extensions: 1127
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1052
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1127
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2108493618
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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