Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP11_F_E24
         (852 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_01_0971 - 9781887-9781924,9782036-9782247,9782327-9784114,978...    29   3.6  
03_01_0639 - 4678993-4679034,4679880-4679945,4680040-4680150,468...    29   4.7  
02_01_0112 - 839048-839552,839638-839720,839828-839982,840078-84...    29   6.2  
01_01_0752 - 5808798-5810183                                           29   6.2  
12_01_0987 - 10016203-10017165,10017346-10018180,10019532-10020379     28   8.2  
04_04_1012 - 30104401-30104955,30105066-30106841                       28   8.2  
04_04_1005 - 30043698-30044252,30044363-30046138                       28   8.2  
03_02_0504 - 8976973-8979414                                           28   8.2  

>12_01_0971 -
           9781887-9781924,9782036-9782247,9782327-9784114,
           9784630-9785432
          Length = 946

 Score = 29.5 bits (63), Expect = 3.6
 Identities = 19/47 (40%), Positives = 26/47 (55%)
 Frame = +3

Query: 267 ALLAEKMDHHPEWFNVYNKLQVTLSSHDVNGLSKRDIKMASFMDKNY 407
           +LL+ K D   +W  V+N + VTL+S DV     R I M S+ D  Y
Sbjct: 373 SLLSIKPDTEDQWMQVHNSIGVTLNS-DV---EVRKILMLSYYDLPY 415


>03_01_0639 -
           4678993-4679034,4679880-4679945,4680040-4680150,
           4680266-4680304,4680394-4680493,4680597-4680712,
           4680897-4681035,4681151-4681222,4681331-4681434,
           4681616-4681867
          Length = 346

 Score = 29.1 bits (62), Expect = 4.7
 Identities = 13/41 (31%), Positives = 27/41 (65%)
 Frame = +3

Query: 54  SAALPPSVTPVCPRQHRVKGKWLINLIKRSAQLSSNLYWNL 176
           S +LP + T +C     V GKW+++ + ++ +++S+L +NL
Sbjct: 303 SKSLPSACTVLCALTLPV-GKWVVDYVLKNHEVTSDLTYNL 342


>02_01_0112 -
           839048-839552,839638-839720,839828-839982,840078-840557,
           840855-841097,841189-841403,841489-841756,842477-842525
          Length = 665

 Score = 28.7 bits (61), Expect = 6.2
 Identities = 15/49 (30%), Positives = 28/49 (57%)
 Frame = +2

Query: 83  SVSSTTPSKRKMADKLNQEERTTELKPLLESGWKIQSNRDAIEKEFQFK 229
           ++ +T   K K+ADKL  EE+    + L E+   +  N+ A ++E++ K
Sbjct: 577 NMKNTVGDKDKLADKLESEEKEKVEEALKEALEWLDENQTAEKEEYEEK 625


>01_01_0752 - 5808798-5810183
          Length = 461

 Score = 28.7 bits (61), Expect = 6.2
 Identities = 21/62 (33%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
 Frame = +3

Query: 228 KILMKLLDS*PXXALLAEKMDHHPEWFNVYNKLQVTLSS-HDVNGLSKRDIKMASFMDKN 404
           ++L +LLD  P   +  EK+  HP WF    K  V LS  ++ N L  +D+  A   D  
Sbjct: 241 RLLSRLLDPNPNIRITVEKLVEHP-WFKKGYKPAVMLSQPNESNNL--KDVHTAFSADHK 297

Query: 405 YN 410
            N
Sbjct: 298 DN 299


>12_01_0987 - 10016203-10017165,10017346-10018180,10019532-10020379
          Length = 881

 Score = 28.3 bits (60), Expect = 8.2
 Identities = 18/48 (37%), Positives = 25/48 (52%)
 Frame = +3

Query: 267 ALLAEKMDHHPEWFNVYNKLQVTLSSHDVNGLSKRDIKMASFMDKNYN 410
           +LLA K D   +W  V+N L    SS    G+S  DI + S+ D  Y+
Sbjct: 387 SLLASKSDTKDQWEQVHNSLSSAFSS---QGMS--DILLLSYYDLPYH 429


>04_04_1012 - 30104401-30104955,30105066-30106841
          Length = 776

 Score = 28.3 bits (60), Expect = 8.2
 Identities = 13/20 (65%), Positives = 15/20 (75%)
 Frame = +3

Query: 750 QVPGXVWEVFPALMNPPPPR 809
           QVPG V+E FP   +PPPPR
Sbjct: 261 QVPGRVFEDFP--HHPPPPR 278


>04_04_1005 - 30043698-30044252,30044363-30046138
          Length = 776

 Score = 28.3 bits (60), Expect = 8.2
 Identities = 13/20 (65%), Positives = 15/20 (75%)
 Frame = +3

Query: 750 QVPGXVWEVFPALMNPPPPR 809
           QVPG V+E FP   +PPPPR
Sbjct: 261 QVPGRVFEDFP--HHPPPPR 278


>03_02_0504 - 8976973-8979414
          Length = 813

 Score = 28.3 bits (60), Expect = 8.2
 Identities = 13/20 (65%), Positives = 15/20 (75%)
 Frame = +3

Query: 750 QVPGXVWEVFPALMNPPPPR 809
           QVPG V+E FP   +PPPPR
Sbjct: 261 QVPGRVFEDFP--HHPPPPR 278


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,928,455
Number of Sequences: 37544
Number of extensions: 362111
Number of successful extensions: 1159
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1087
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1157
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2373961368
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)