Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP11_F_E23
         (892 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_08_0945 - 21738643-21738760,21740056-21740287,21740582-217406...    79   6e-15
05_07_0347 - 29440541-29440664,29440908-29441020,29441522-294416...    74   1e-13
07_03_0445 - 18281715-18281832,18282274-18282505,18283486-182835...    73   3e-13
12_02_0695 + 22220054-22220056,22221226-22221276,22221415-222215...    70   3e-12

>10_08_0945 -
           21738643-21738760,21740056-21740287,21740582-21740630,
           21740720-21740776
          Length = 151

 Score = 78.6 bits (185), Expect = 6e-15
 Identities = 38/74 (51%), Positives = 47/74 (63%)
 Frame = +1

Query: 316 LXKYMSSXPVVPMVWEGLNVVKTGXXFYKXPLXPTXSXPGTIRGXLWLQLGRNIIHGSDT 495
           L +Y+ S PVV MVWEG  VV TG         P  + PGTIRG   + +GRN+IHGSD+
Sbjct: 63  LVEYIVSGPVVAMVWEGKQVVSTGRKLV-GATNPLAAEPGTIRGDFAVDIGRNVIHGSDS 121

Query: 496 VESAXXEIXLWFTD 537
           VE+A  EI LWF +
Sbjct: 122 VENARKEIALWFPE 135



 Score = 57.6 bits (133), Expect = 1e-08
 Identities = 26/59 (44%), Positives = 35/59 (59%)
 Frame = +3

Query: 138 ERTFIMVXPDGVQRGLVGTIIERFEXXXXXXXXXXXXWPSEELLXQHYSDXASRPFFPG 314
           E+TFIM+ PDGVQRGL+G +I RFE               +    +HY+D +S+PFF G
Sbjct: 4   EQTFIMIKPDGVQRGLIGEVIGRFEKKGFYLKAMKLINVEKSFAEKHYADLSSKPFFGG 62


>05_07_0347 -
           29440541-29440664,29440908-29441020,29441522-29441689,
           29442341-29442391,29442518-29442555,29442885-29442978
          Length = 195

 Score = 74.1 bits (174), Expect = 1e-13
 Identities = 38/72 (52%), Positives = 45/72 (62%)
 Frame = +1

Query: 316 LXKYMSSXPVVPMVWEGLNVVKTGXXFYKXPLXPTXSXPGTIRGXLWLQLGRNIIHGSDT 495
           L  ++SS PV+ MVWEG  V+K G         P  S PGTIRG L + +GRNIIHGSD 
Sbjct: 105 LCDFLSSGPVLAMVWEGEGVIKYGRKLI-GATDPQKSEPGTIRGDLAVVVGRNIIHGSDG 163

Query: 496 VESAXXEIXLWF 531
            E+A  EI LWF
Sbjct: 164 PETAKAEIGLWF 175



 Score = 62.1 bits (144), Expect = 6e-10
 Identities = 29/63 (46%), Positives = 35/63 (55%)
 Frame = +3

Query: 126 AEQRERTFIMVXPDGVQRGLVGTIIERFEXXXXXXXXXXXXWPSEELLXQHYSDXASRPF 305
           A + ERTFI + PDGVQRGL+  I+ RFE             PS+E   +HY D   RPF
Sbjct: 42  AAEMERTFIAIKPDGVQRGLISEILSRFERKGFKLVAIKLVVPSKEFAQKHYHDLKDRPF 101

Query: 306 FPG 314
           F G
Sbjct: 102 FNG 104


>07_03_0445 -
           18281715-18281832,18282274-18282505,18283486-18283534,
           18283733-18283783
          Length = 149

 Score = 72.9 bits (171), Expect = 3e-13
 Identities = 35/74 (47%), Positives = 47/74 (63%)
 Frame = +1

Query: 316 LXKYMSSXPVVPMVWEGLNVVKTGXXFYKXPLXPTXSXPGTIRGXLWLQLGRNIIHGSDT 495
           L +Y+ S PVV MVWEG +VV TG         P  + PGTIR    +++GRN+IHGSD+
Sbjct: 61  LVEYIISGPVVAMVWEGKDVVATGRRII-GATRPWEAAPGTIRADYAVEVGRNVIHGSDS 119

Query: 496 VESAXXEIXLWFTD 537
           V++   EI LWF +
Sbjct: 120 VDNGKKEIALWFPE 133



 Score = 60.5 bits (140), Expect = 2e-09
 Identities = 27/59 (45%), Positives = 34/59 (57%)
 Frame = +3

Query: 138 ERTFIMVXPDGVQRGLVGTIIERFEXXXXXXXXXXXXWPSEELLXQHYSDXASRPFFPG 314
           E++FIM+ PDGVQRGL+G II RFE                    QHY+D + +PFFPG
Sbjct: 2   EQSFIMIKPDGVQRGLIGDIISRFEKKGFYLRGMKFMNVERSFAQQHYADLSDKPFFPG 60


>12_02_0695 +
           22220054-22220056,22221226-22221276,22221415-22221501,
           22222064-22222144,22222241-22222353,22222482-22222531,
           22222790-22222857
          Length = 150

 Score = 69.7 bits (163), Expect = 3e-12
 Identities = 34/77 (44%), Positives = 46/77 (59%)
 Frame = +1

Query: 316 LXKYMSSXPVVPMVWEGLNVVKTGXXFYKXPLXPTXSXPGTIRGXLWLQLGRNIIHGSDT 495
           L +Y++S PVV M WEG  VV +          P  + PGTIRG L +Q GRN++HGSD+
Sbjct: 62  LIEYITSGPVVCMAWEGNGVVASARKLI-GATNPLQAEPGTIRGDLAVQTGRNVVHGSDS 120

Query: 496 VESAXXEIXLWFTDTXL 546
            ++   EI LWF +  L
Sbjct: 121 PDNGKREIALWFKEGEL 137



 Score = 60.1 bits (139), Expect = 2e-09
 Identities = 27/59 (45%), Positives = 35/59 (59%)
 Frame = +3

Query: 138 ERTFIMVXPDGVQRGLVGTIIERFEXXXXXXXXXXXXWPSEELLXQHYSDXASRPFFPG 314
           E+++IM+ PDGVQRGLVG II RFE               ++L  +HY D   +PFFPG
Sbjct: 3   EQSYIMIKPDGVQRGLVGEIISRFEKKGFVLKGLKLFQCPKDLAQEHYKDLKEKPFFPG 61


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,700,357
Number of Sequences: 37544
Number of extensions: 149132
Number of successful extensions: 243
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 230
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 236
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2506954360
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)