Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP11_F_E23
         (892 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X13107-1|CAA31500.1|  153|Drosophila melanogaster protein ( Dros...    98   2e-20
AY113576-1|AAM29581.1|  153|Drosophila melanogaster RH27794p pro...    98   2e-20
AE014297-4796|AAF57188.3|  172|Drosophila melanogaster CG2210-PA...    98   2e-20
BT001459-1|AAN71214.1|  118|Drosophila melanogaster GM19775p pro...    83   7e-16
X85331-1|CAA59680.1|  437|Drosophila melanogaster msh protein.         32   1.2  

>X13107-1|CAA31500.1|  153|Drosophila melanogaster protein (
           Drosophila melanogasterawd mRNA ( abnormal wing disc ).
           ).
          Length = 153

 Score = 97.9 bits (233), Expect = 2e-20
 Identities = 51/97 (52%), Positives = 61/97 (62%)
 Frame = +1

Query: 256 QKNFSXNTTAXWHPGXSSLXLXKYMSSXPVVPMVWEGLNVVKTGXXFYKXPLXPTXSXPG 435
           +K+++  +   + PG     L  YM+S PVVPMVWEGLNVVKTG         P  S PG
Sbjct: 50  EKHYADLSARPFFPG-----LVNYMNSGPVVPMVWEGLNVVKTGRQML-GATNPADSLPG 103

Query: 436 TIRGXLWLQLGRNIIHGSDTVESAXXEIXLWFTDTXL 546
           TIRG   +Q+GRNIIHGSD VESA  EI LWF +  L
Sbjct: 104 TIRGDFCIQVGRNIIHGSDAVESAEKEIALWFNEKEL 140



 Score = 84.6 bits (200), Expect = 2e-16
 Identities = 39/64 (60%), Positives = 45/64 (70%)
 Frame = +3

Query: 123 MAEQRERTFIMVXPDGVQRGLVGTIIERFEXXXXXXXXXXXXWPSEELLXQHYSDXASRP 302
           MA  +ERTFIMV PDGVQRGLVG IIERFE            W S+ELL +HY+D ++RP
Sbjct: 1   MAANKERTFIMVKPDGVQRGLVGKIIERFEQKGFKLVALKFTWASKELLEKHYADLSARP 60

Query: 303 FFPG 314
           FFPG
Sbjct: 61  FFPG 64


>AY113576-1|AAM29581.1|  153|Drosophila melanogaster RH27794p
           protein.
          Length = 153

 Score = 97.9 bits (233), Expect = 2e-20
 Identities = 51/97 (52%), Positives = 61/97 (62%)
 Frame = +1

Query: 256 QKNFSXNTTAXWHPGXSSLXLXKYMSSXPVVPMVWEGLNVVKTGXXFYKXPLXPTXSXPG 435
           +K+++  +   + PG     L  YM+S PVVPMVWEGLNVVKTG         P  S PG
Sbjct: 50  EKHYADLSARPFFPG-----LVNYMNSGPVVPMVWEGLNVVKTGRQML-GATNPADSLPG 103

Query: 436 TIRGXLWLQLGRNIIHGSDTVESAXXEIXLWFTDTXL 546
           TIRG   +Q+GRNIIHGSD VESA  EI LWF +  L
Sbjct: 104 TIRGDFCIQVGRNIIHGSDAVESAEKEIALWFNEKEL 140



 Score = 84.6 bits (200), Expect = 2e-16
 Identities = 39/64 (60%), Positives = 45/64 (70%)
 Frame = +3

Query: 123 MAEQRERTFIMVXPDGVQRGLVGTIIERFEXXXXXXXXXXXXWPSEELLXQHYSDXASRP 302
           MA  +ERTFIMV PDGVQRGLVG IIERFE            W S+ELL +HY+D ++RP
Sbjct: 1   MAANKERTFIMVKPDGVQRGLVGKIIERFEQKGFKLVALKFTWASKELLEKHYADLSARP 60

Query: 303 FFPG 314
           FFPG
Sbjct: 61  FFPG 64


>AE014297-4796|AAF57188.3|  172|Drosophila melanogaster CG2210-PA
           protein.
          Length = 172

 Score = 97.9 bits (233), Expect = 2e-20
 Identities = 51/97 (52%), Positives = 61/97 (62%)
 Frame = +1

Query: 256 QKNFSXNTTAXWHPGXSSLXLXKYMSSXPVVPMVWEGLNVVKTGXXFYKXPLXPTXSXPG 435
           +K+++  +   + PG     L  YM+S PVVPMVWEGLNVVKTG         P  S PG
Sbjct: 69  EKHYADLSARPFFPG-----LVNYMNSGPVVPMVWEGLNVVKTGRQML-GATNPADSLPG 122

Query: 436 TIRGXLWLQLGRNIIHGSDTVESAXXEIXLWFTDTXL 546
           TIRG   +Q+GRNIIHGSD VESA  EI LWF +  L
Sbjct: 123 TIRGDFCIQVGRNIIHGSDAVESAEKEIALWFNEKEL 159



 Score = 84.6 bits (200), Expect = 2e-16
 Identities = 39/64 (60%), Positives = 45/64 (70%)
 Frame = +3

Query: 123 MAEQRERTFIMVXPDGVQRGLVGTIIERFEXXXXXXXXXXXXWPSEELLXQHYSDXASRP 302
           MA  +ERTFIMV PDGVQRGLVG IIERFE            W S+ELL +HY+D ++RP
Sbjct: 20  MAANKERTFIMVKPDGVQRGLVGKIIERFEQKGFKLVALKFTWASKELLEKHYADLSARP 79

Query: 303 FFPG 314
           FFPG
Sbjct: 80  FFPG 83


>BT001459-1|AAN71214.1|  118|Drosophila melanogaster GM19775p
           protein.
          Length = 118

 Score = 82.6 bits (195), Expect = 7e-16
 Identities = 38/63 (60%), Positives = 44/63 (69%)
 Frame = +3

Query: 126 AEQRERTFIMVXPDGVQRGLVGTIIERFEXXXXXXXXXXXXWPSEELLXQHYSDXASRPF 305
           A  +ERTFIMV PDGVQRGLVG IIERFE            W S+ELL +HY+D ++RPF
Sbjct: 1   AANKERTFIMVKPDGVQRGLVGKIIERFEQKGFKLVALKFTWASKELLEKHYADLSARPF 60

Query: 306 FPG 314
           FPG
Sbjct: 61  FPG 63



 Score = 41.1 bits (92), Expect = 0.002
 Identities = 20/42 (47%), Positives = 28/42 (66%)
 Frame = +1

Query: 256 QKNFSXNTTAXWHPGXSSLXLXKYMSSXPVVPMVWEGLNVVK 381
           +K+++  +   + PG     L  YM+S PVVPMVWEGLNVV+
Sbjct: 49  EKHYADLSARPFFPG-----LVNYMNSGPVVPMVWEGLNVVQ 85


>X85331-1|CAA59680.1|  437|Drosophila melanogaster msh protein.
          Length = 437

 Score = 31.9 bits (69), Expect = 1.2
 Identities = 15/36 (41%), Positives = 19/36 (52%)
 Frame = -1

Query: 271 WRSSSDGHTXFKPTXLKPFFSKRSIMVPTRPRCTPS 164
           WRS+S  H   K T     FS  S++  TRPR  P+
Sbjct: 41  WRSASAAHHLHKTTSRLSNFSVASLLADTRPRTPPN 76


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,407,463
Number of Sequences: 53049
Number of extensions: 252561
Number of successful extensions: 394
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 372
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 391
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4352837424
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)