Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP11_F_E23
         (892 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z79754-13|CAB02101.1|  153|Caenorhabditis elegans Hypothetical p...    81   8e-16
AC006644-2|AAF39837.1|  118|Caenorhabditis elegans Hypothetical ...    41   0.001

>Z79754-13|CAB02101.1|  153|Caenorhabditis elegans Hypothetical
           protein F25H2.5 protein.
          Length = 153

 Score = 81.4 bits (192), Expect = 8e-16
 Identities = 41/72 (56%), Positives = 46/72 (63%)
 Frame = +1

Query: 316 LXKYMSSXPVVPMVWEGLNVVKTGXXFYKXPLXPTXSXPGTIRGXLWLQLGRNIIHGSDT 495
           L +YMSS PVV MVW+GL+VVK G         P  S PGTIRG   +Q GRNI HGSD 
Sbjct: 64  LIEYMSSGPVVAMVWQGLDVVKQGRSML-GATNPLASAPGTIRGDFCIQTGRNICHGSDA 122

Query: 496 VESAXXEIXLWF 531
           V+SA  EI  WF
Sbjct: 123 VDSANREIAHWF 134



 Score = 56.4 bits (130), Expect = 3e-08
 Identities = 28/58 (48%), Positives = 31/58 (53%)
 Frame = +3

Query: 138 ERTFIMVXPDGVQRGLVGTIIERFEXXXXXXXXXXXXWPSEELLXQHYSDXASRPFFP 311
           ERTFI + PDGV RGLVG II RFE              S+  L  HY D   +PFFP
Sbjct: 5   ERTFIAIKPDGVHRGLVGKIIARFEERGYKLVALKQMTASKAHLEVHYQDLKDKPFFP 62


>AC006644-2|AAF39837.1|  118|Caenorhabditis elegans Hypothetical
           protein F55A3.6 protein.
          Length = 118

 Score = 41.1 bits (92), Expect = 0.001
 Identities = 29/77 (37%), Positives = 36/77 (46%), Gaps = 3/77 (3%)
 Frame = +1

Query: 316 LXKYMSSXPVVPMVWEGLNVVKTGXXFYKXPLXPTXSXPGTIRGXLWLQLGRNI---IHG 486
           L  YMSS PVV M+WEG +VVK         L       G  R   +  + R+     H 
Sbjct: 39  LIDYMSSGPVVAMLWEGCDVVKRARVILGEEL-----EVGEFRSIFYDLVVRDTHKGCHC 93

Query: 487 SDTVESAXXEIXLWFTD 537
           SD+V SA  E  LWF +
Sbjct: 94  SDSVASANREYVLWFEE 110


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,709,840
Number of Sequences: 27780
Number of extensions: 125281
Number of successful extensions: 183
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 178
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 182
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2255353870
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)