Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP11_F_E22
         (935 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_06_0610 - 25449085-25453284                                         31   1.7  
03_01_0515 - 3864796-3865425                                           29   7.0  

>11_06_0610 - 25449085-25453284
          Length = 1399

 Score = 30.7 bits (66), Expect = 1.7
 Identities = 22/72 (30%), Positives = 22/72 (30%)
 Frame = +2

Query: 707  PPGAPVXXRAXPQVLLXXPFHASATPKXAXXFXXPXXXSXPPSGXXPLRPXRNXXPXPXG 886
            PP APV     P   L  P   S  P        P   S PP    PL P     P    
Sbjct: 1265 PPPAPVSLPPPPVKSLPPPAPVSLPPPVVKSLPPPAPVSLPPPAVKPLPP---PAPVSLP 1321

Query: 887  XAAXAPTGXPTP 922
              A  P   P P
Sbjct: 1322 PPAVKPLPPPVP 1333


>03_01_0515 - 3864796-3865425
          Length = 209

 Score = 28.7 bits (61), Expect = 7.0
 Identities = 21/75 (28%), Positives = 23/75 (30%)
 Frame = +2

Query: 707 PPGAPVXXRAXPQVLLXXPFHASATPKXAXXFXXPXXXSXPPSGXXPLRPXRNXXPXPXG 886
           PP  P    A P  L   P   S+ P  A     P     P     P  P     P P  
Sbjct: 39  PPSPPT--EASPPPLAPPPSVTSSPPPPAAGPLMPPPPPPPSVTSSPPPPPLPPPPPPPA 96

Query: 887 XAAXAPTGXPTPXSP 931
            +   P   P P SP
Sbjct: 97  ASPPPPPPSPPPPSP 111


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,331,388
Number of Sequences: 37544
Number of extensions: 184011
Number of successful extensions: 376
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 288
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 367
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2682675460
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)