Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP11_F_E21
(1373 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog (hed... 36 0.067
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 36 0.089
U39666-1|AAA80412.2| 644|Caenorhabditis elegans Nematode astaci... 33 0.47
U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical pr... 33 0.62
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 32 0.82
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 32 1.1
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 32 1.1
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 32 1.1
L25598-3|AAM15551.1| 759|Caenorhabditis elegans Calpain family ... 31 1.4
AL023835-10|CAA19494.2| 691|Caenorhabditis elegans Hypothetical... 31 1.4
AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily a... 31 1.4
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 31 1.9
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 31 1.9
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 31 2.5
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 31 2.5
U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (gr... 31 2.5
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 31 2.5
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 31 2.5
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 31 2.5
L25598-4|AAV58888.1| 737|Caenorhabditis elegans Calpain family ... 30 3.3
Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical pr... 30 4.4
Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical pr... 30 4.4
U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cyt... 30 4.4
U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin cyt... 30 4.4
U50310-5|AAA92541.1| 318|Caenorhabditis elegans Ground-like (gr... 30 4.4
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 30 4.4
U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical pr... 29 5.8
Z83227-3|CAB05726.2| 241|Caenorhabditis elegans Hypothetical pr... 29 7.7
Z77655-1|CAB01137.1| 393|Caenorhabditis elegans Hypothetical pr... 29 7.7
U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical pr... 29 7.7
U27312-9|AAA68252.1| 239|Caenorhabditis elegans Hypothetical pr... 29 7.7
AF045646-2|AAK29827.1| 371|Caenorhabditis elegans Collagen prot... 29 7.7
>U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog
(hedgehog-like family)protein 7 protein.
Length = 401
Score = 35.9 bits (79), Expect = 0.067
Identities = 18/62 (29%), Positives = 21/62 (33%)
Frame = +1
Query: 1141 PXPXHXVPSXXXXXPXXXXXXLSXVPPXXXPPPXRXPSXXQXXPPXXXPXPPPPP*TAVX 1320
P P H VP+ + P PP P PP P PPP P +A
Sbjct: 101 PYPQHAVPAPAPPPAPYPQHAVPAPAPYQQQPPPPPPPPHYPPPPPHYPPPPPAPHSAYI 160
Query: 1321 XH 1326
H
Sbjct: 161 DH 162
Score = 29.5 bits (63), Expect = 5.8
Identities = 12/29 (41%), Positives = 12/29 (41%)
Frame = +1
Query: 1216 PPXXXPPPXRXPSXXQXXPPXXXPXPPPP 1302
PP PPP P Q P PPPP
Sbjct: 26 PPPPPPPPKPAPYVEQSAQPQQTAPPPPP 54
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 35.5 bits (78), Expect = 0.089
Identities = 17/54 (31%), Positives = 17/54 (31%)
Frame = +1
Query: 1141 PXPXHXVPSXXXXXPXXXXXXLSXVPPXXXPPPXRXPSXXQXXPPXXXPXPPPP 1302
P P P P PP PPP P PP P PPPP
Sbjct: 27 PPPCPPPPPPMCAPPPLPCPPPPICPPQFCPPPPMCPPPPPPPPPPMCPPPPPP 80
Score = 35.5 bits (78), Expect = 0.089
Identities = 14/30 (46%), Positives = 14/30 (46%)
Frame = +1
Query: 1216 PPXXXPPPXRXPSXXQXXPPXXXPXPPPPP 1305
PP PPP P PP P PPPPP
Sbjct: 41 PPLPCPPPPICPPQFCPPPPMCPPPPPPPP 70
Score = 31.9 bits (69), Expect = 1.1
Identities = 18/58 (31%), Positives = 18/58 (31%)
Frame = +1
Query: 1132 CXXPXPXHXVPSXXXXXPXXXXXXLSXVPPXXXPPPXRXPSXXQXXPPXXXPXPPPPP 1305
C P P P P PP PPP P PP P PPP P
Sbjct: 30 CPPPPPPMCAPPPLPCPPPPICPPQFCPPPPMCPPPPPPPP-----PPMCPPPPPPMP 82
>U39666-1|AAA80412.2| 644|Caenorhabditis elegans Nematode astacin
protease protein33 protein.
Length = 644
Score = 33.1 bits (72), Expect = 0.47
Identities = 13/30 (43%), Positives = 13/30 (43%)
Frame = +1
Query: 1216 PPXXXPPPXRXPSXXQXXPPXXXPXPPPPP 1305
PP PPP PP P PPPPP
Sbjct: 57 PPWDRPPPPWRRPPWHRRPPWGLPPPPPPP 86
>U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical protein
B0280.13 protein.
Length = 616
Score = 32.7 bits (71), Expect = 0.62
Identities = 20/56 (35%), Positives = 23/56 (41%), Gaps = 1/56 (1%)
Frame = +1
Query: 1141 PXPXHXVPSXXXXXPXXXXXXLSXVPPXXXP-PPXRXPSXXQXXPPXXXPXPPPPP 1305
P P +P+ P +S PP P PP PS PP P PPPPP
Sbjct: 474 PPPPSRIPNPS---PSPQPAEVSKSPPPPPPLPPIATPSSVPPPPP---PPPPPPP 523
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical protein
E02A10.2 protein.
Length = 385
Score = 32.3 bits (70), Expect = 0.82
Identities = 18/53 (33%), Positives = 18/53 (33%)
Frame = -1
Query: 1304 GGGGGXGXLXGGXXXXXEGXLXGGGSXXGGTXERXXXSXXGXXXXXXGTXCXG 1146
GGGGG G GG G GGG GG G G C G
Sbjct: 136 GGGGGCGGGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGGCGGGGGGGCGG 188
Score = 31.1 bits (67), Expect = 1.9
Identities = 19/55 (34%), Positives = 19/55 (34%)
Frame = -1
Query: 1304 GGGGGXGXLXGGXXXXXEGXLXGGGSXXGGTXERXXXSXXGXXXXXXGTXCXGXG 1140
GGGGG G GG G GGG GG G G C G G
Sbjct: 23 GGGGGGGGGCGGGCGGG-GGCGGGGGCGGGCAPPPPPPACGGGCGGGGGGCGGGG 76
Score = 29.9 bits (64), Expect = 4.4
Identities = 18/53 (33%), Positives = 18/53 (33%)
Frame = -1
Query: 1304 GGGGGXGXLXGGXXXXXEGXLXGGGSXXGGTXERXXXSXXGXXXXXXGTXCXG 1146
GGGGG G GG G GGG GG G G C G
Sbjct: 80 GGGGGCGG-GGGGCGGGGGGCGGGGGCGGGCAPPPPPPACGGGCGGGGGGCGG 131
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 31.9 bits (69), Expect = 1.1
Identities = 16/44 (36%), Positives = 17/44 (38%), Gaps = 3/44 (6%)
Frame = +1
Query: 1183 PXXXXXXLSXVPPXXXPPPXRXPSXXQXXPP---XXXPXPPPPP 1305
P +S PP PPP P PP P PPPPP
Sbjct: 747 PPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPP 790
Score = 29.5 bits (63), Expect = 5.8
Identities = 12/30 (40%), Positives = 12/30 (40%)
Frame = +1
Query: 1216 PPXXXPPPXRXPSXXQXXPPXXXPXPPPPP 1305
PP PP PP P PPPPP
Sbjct: 746 PPPGGLPPISGGPPPPPPPPGGCPPPPPPP 775
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 31.9 bits (69), Expect = 1.1
Identities = 16/44 (36%), Positives = 17/44 (38%), Gaps = 3/44 (6%)
Frame = +1
Query: 1183 PXXXXXXLSXVPPXXXPPPXRXPSXXQXXPP---XXXPXPPPPP 1305
P +S PP PPP P PP P PPPPP
Sbjct: 747 PPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPP 790
Score = 29.5 bits (63), Expect = 5.8
Identities = 12/30 (40%), Positives = 12/30 (40%)
Frame = +1
Query: 1216 PPXXXPPPXRXPSXXQXXPPXXXPXPPPPP 1305
PP PP PP P PPPPP
Sbjct: 746 PPPGGLPPISGGPPPPPPPPGGCPPPPPPP 775
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 31.9 bits (69), Expect = 1.1
Identities = 16/44 (36%), Positives = 17/44 (38%), Gaps = 3/44 (6%)
Frame = +1
Query: 1183 PXXXXXXLSXVPPXXXPPPXRXPSXXQXXPP---XXXPXPPPPP 1305
P +S PP PPP P PP P PPPPP
Sbjct: 330 PPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPP 373
Score = 29.5 bits (63), Expect = 5.8
Identities = 12/30 (40%), Positives = 12/30 (40%)
Frame = +1
Query: 1216 PPXXXPPPXRXPSXXQXXPPXXXPXPPPPP 1305
PP PP PP P PPPPP
Sbjct: 329 PPPGGLPPISGGPPPPPPPPGGCPPPPPPP 358
>L25598-3|AAM15551.1| 759|Caenorhabditis elegans Calpain family
protein 1, isoform d protein.
Length = 759
Score = 31.5 bits (68), Expect = 1.4
Identities = 14/30 (46%), Positives = 14/30 (46%)
Frame = -1
Query: 1304 GGGGGXGXLXGGXXXXXEGXLXGGGSXXGG 1215
GGGGG G GG G GGG GG
Sbjct: 53 GGGGGGGGGGGGGFGGGNGGFGGGGGGSGG 82
Score = 29.1 bits (62), Expect = 7.7
Identities = 14/30 (46%), Positives = 14/30 (46%)
Frame = -1
Query: 1304 GGGGGXGXLXGGXXXXXEGXLXGGGSXXGG 1215
GGGGG G GG G GGG GG
Sbjct: 54 GGGGGGGGGGGGFGGGNGGFGGGGGGSGGG 83
>AL023835-10|CAA19494.2| 691|Caenorhabditis elegans Hypothetical
protein Y37A1B.11 protein.
Length = 691
Score = 31.5 bits (68), Expect = 1.4
Identities = 15/36 (41%), Positives = 17/36 (47%), Gaps = 3/36 (8%)
Frame = +1
Query: 1207 SXVPPXXXPPPXRXPSXXQXXP---PXXXPXPPPPP 1305
S V PPP R P+ + P P P PPPPP
Sbjct: 541 SPVREPTPPPPPREPTPREPTPEPEPVREPTPPPPP 576
>AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily
assigned gene nameprotein 268 protein.
Length = 881
Score = 31.5 bits (68), Expect = 1.4
Identities = 19/49 (38%), Positives = 20/49 (40%)
Frame = +1
Query: 1219 PXXXPPPXRXPSXXQXXPPXXXPXPPPPP*TAVXXHXXXXSXLTSPSXS 1365
P PPP S Q PP P PPPPP T L +PS S
Sbjct: 67 PPPPPPPPPLISILQQAPP---PPPPPPPPTLKAPPPPPILGLKTPSKS 112
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical protein
C08B11.5 protein.
Length = 388
Score = 31.1 bits (67), Expect = 1.9
Identities = 20/68 (29%), Positives = 21/68 (30%)
Frame = +1
Query: 1102 PXXQXXPRKXCXXPXPXHXVPSXXXXXPXXXXXXLSXVPPXXXPPPXRXPSXXQXXPPXX 1281
P P P P P P + PP PPP R P PP
Sbjct: 261 PPVPPPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMW--PPPPPPPPGRTPG-----PPGM 313
Query: 1282 XPXPPPPP 1305
PPPPP
Sbjct: 314 PGMPPPPP 321
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA binding
protein protein.
Length = 398
Score = 31.1 bits (67), Expect = 1.9
Identities = 20/68 (29%), Positives = 21/68 (30%)
Frame = +1
Query: 1102 PXXQXXPRKXCXXPXPXHXVPSXXXXXPXXXXXXLSXVPPXXXPPPXRXPSXXQXXPPXX 1281
P P P P P P + PP PPP R P PP
Sbjct: 271 PPVPPPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMW--PPPPPPPPGRTPG-----PPGM 323
Query: 1282 XPXPPPPP 1305
PPPPP
Sbjct: 324 PGMPPPPP 331
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical protein
ZK643.8 protein.
Length = 774
Score = 30.7 bits (66), Expect = 2.5
Identities = 18/55 (32%), Positives = 18/55 (32%)
Frame = -1
Query: 1304 GGGGGXGXLXGGXXXXXEGXLXGGGSXXGGTXERXXXSXXGXXXXXXGTXCXGXG 1140
GGGGG G GG G GGG GG G C G G
Sbjct: 105 GGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGGCGGGSSGGCGGGSSGGCGGGG 159
Score = 29.9 bits (64), Expect = 4.4
Identities = 19/56 (33%), Positives = 20/56 (35%), Gaps = 1/56 (1%)
Frame = -1
Query: 1304 GGGGGXGXLXGGXXXXXEGXLXGGGSXX-GGTXERXXXSXXGXXXXXXGTXCXGXG 1140
GGGGG G GG G GGG GG+ G G C G G
Sbjct: 112 GGGGGCGGGGGGCGGGGGGCGGGGGGGCGGGSSGGCGGGSSGGCGGGGGGGCGGGG 167
Score = 29.1 bits (62), Expect = 7.7
Identities = 14/30 (46%), Positives = 14/30 (46%)
Frame = -1
Query: 1304 GGGGGXGXLXGGXXXXXEGXLXGGGSXXGG 1215
GGGGG G GG G GGG GG
Sbjct: 98 GGGGGCGGGGGGCGGGGGGCGGGGGGCGGG 127
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical protein
ZK643.8 protein.
Length = 774
Score = 30.7 bits (66), Expect = 2.5
Identities = 18/55 (32%), Positives = 18/55 (32%)
Frame = -1
Query: 1304 GGGGGXGXLXGGXXXXXEGXLXGGGSXXGGTXERXXXSXXGXXXXXXGTXCXGXG 1140
GGGGG G GG G GGG GG G C G G
Sbjct: 105 GGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGGCGGGSSGGCGGGSSGGCGGGG 159
Score = 29.9 bits (64), Expect = 4.4
Identities = 19/56 (33%), Positives = 20/56 (35%), Gaps = 1/56 (1%)
Frame = -1
Query: 1304 GGGGGXGXLXGGXXXXXEGXLXGGGSXX-GGTXERXXXSXXGXXXXXXGTXCXGXG 1140
GGGGG G GG G GGG GG+ G G C G G
Sbjct: 112 GGGGGCGGGGGGCGGGGGGCGGGGGGGCGGGSSGGCGGGSSGGCGGGGGGGCGGGG 167
Score = 29.1 bits (62), Expect = 7.7
Identities = 14/30 (46%), Positives = 14/30 (46%)
Frame = -1
Query: 1304 GGGGGXGXLXGGXXXXXEGXLXGGGSXXGG 1215
GGGGG G GG G GGG GG
Sbjct: 98 GGGGGCGGGGGGCGGGGGGCGGGGGGCGGG 127
>U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (grd
related) protein 6 protein.
Length = 240
Score = 30.7 bits (66), Expect = 2.5
Identities = 12/30 (40%), Positives = 14/30 (46%)
Frame = +1
Query: 1213 VPPXXXPPPXRXPSXXQXXPPXXXPXPPPP 1302
+P PPP P+ PP P PPPP
Sbjct: 49 MPMPVCPPPPPCPAQFCPPPPICPPPPPPP 78
Score = 30.3 bits (65), Expect = 3.3
Identities = 20/68 (29%), Positives = 21/68 (30%)
Frame = +1
Query: 1102 PXXQXXPRKXCXXPXPXHXVPSXXXXXPXXXXXXLSXVPPXXXPPPXRXPSXXQXXPPXX 1281
P PR C P P +P P PP PPP P
Sbjct: 31 PTPMCQPRMPCAAPMPM-PMPMPVCPPPPPCPAQFCPPPPICPPPP-----------PPP 78
Query: 1282 XPXPPPPP 1305
P PPPPP
Sbjct: 79 MPCPPPPP 86
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 30.7 bits (66), Expect = 2.5
Identities = 13/30 (43%), Positives = 14/30 (46%)
Frame = +1
Query: 1216 PPXXXPPPXRXPSXXQXXPPXXXPXPPPPP 1305
PP PPP P+ PP PPPPP
Sbjct: 275 PPTGSPPPP--PAGGSPPPPRAGSPPPPPP 302
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 30.7 bits (66), Expect = 2.5
Identities = 13/30 (43%), Positives = 14/30 (46%)
Frame = +1
Query: 1216 PPXXXPPPXRXPSXXQXXPPXXXPXPPPPP 1305
PP PPP P+ PP PPPPP
Sbjct: 296 PPTGSPPPP--PAGGSPPPPRAGSPPPPPP 323
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 30.7 bits (66), Expect = 2.5
Identities = 13/30 (43%), Positives = 14/30 (46%)
Frame = +1
Query: 1216 PPXXXPPPXRXPSXXQXXPPXXXPXPPPPP 1305
PP PPP P+ PP PPPPP
Sbjct: 281 PPTGSPPPP--PAGGSPPPPRAGSPPPPPP 308
>L25598-4|AAV58888.1| 737|Caenorhabditis elegans Calpain family
protein 1, isoform b protein.
Length = 737
Score = 30.3 bits (65), Expect = 3.3
Identities = 14/30 (46%), Positives = 14/30 (46%)
Frame = -1
Query: 1304 GGGGGXGXLXGGXXXXXEGXLXGGGSXXGG 1215
GGGGG G GG G GGG GG
Sbjct: 61 GGGGGFGGGNGGFGGGGGGNYGGGGGNQGG 90
Score = 29.1 bits (62), Expect = 7.7
Identities = 14/30 (46%), Positives = 14/30 (46%)
Frame = -1
Query: 1304 GGGGGXGXLXGGXXXXXEGXLXGGGSXXGG 1215
GGGGG G GG G GGG GG
Sbjct: 54 GGGGGGGGGGGGFGGGNGGFGGGGGGNYGG 83
>Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical protein
C33B4.3b protein.
Length = 993
Score = 29.9 bits (64), Expect = 4.4
Identities = 13/32 (40%), Positives = 15/32 (46%), Gaps = 2/32 (6%)
Frame = +1
Query: 1216 PPXXXPPPXRXPSXX--QXXPPXXXPXPPPPP 1305
PP PPP P+ + PP PPPPP
Sbjct: 767 PPPPPPPPHCEPTMVHVEFTPPSTSSVPPPPP 798
>Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical protein
C33B4.3a protein.
Length = 1110
Score = 29.9 bits (64), Expect = 4.4
Identities = 13/32 (40%), Positives = 15/32 (46%), Gaps = 2/32 (6%)
Frame = +1
Query: 1216 PPXXXPPPXRXPSXX--QXXPPXXXPXPPPPP 1305
PP PPP P+ + PP PPPPP
Sbjct: 767 PPPPPPPPHCEPTMVHVEFTPPSTSSVPPPPP 798
>U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform b
protein.
Length = 781
Score = 29.9 bits (64), Expect = 4.4
Identities = 15/34 (44%), Positives = 16/34 (47%), Gaps = 1/34 (2%)
Frame = +1
Query: 1207 SXVPPXXXPPPXR-XPSXXQXXPPXXXPXPPPPP 1305
S PP PPP P+ PP P PPPPP
Sbjct: 627 SAAPPPPPPPPPMGLPAVGAGAPP---PPPPPPP 657
Score = 29.1 bits (62), Expect = 7.7
Identities = 12/31 (38%), Positives = 13/31 (41%)
Frame = +1
Query: 1213 VPPXXXPPPXRXPSXXQXXPPXXXPXPPPPP 1305
VPP PPP + P PPPPP
Sbjct: 608 VPPPPPPPPPQSFGMAPISSAAPPPPPPPPP 638
>U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform a
protein.
Length = 607
Score = 29.9 bits (64), Expect = 4.4
Identities = 15/34 (44%), Positives = 16/34 (47%), Gaps = 1/34 (2%)
Frame = +1
Query: 1207 SXVPPXXXPPPXR-XPSXXQXXPPXXXPXPPPPP 1305
S PP PPP P+ PP P PPPPP
Sbjct: 453 SAAPPPPPPPPPMGLPAVGAGAPP---PPPPPPP 483
Score = 29.1 bits (62), Expect = 7.7
Identities = 12/31 (38%), Positives = 13/31 (41%)
Frame = +1
Query: 1213 VPPXXXPPPXRXPSXXQXXPPXXXPXPPPPP 1305
VPP PPP + P PPPPP
Sbjct: 434 VPPPPPPPPPQSFGMAPISSAAPPPPPPPPP 464
>U50310-5|AAA92541.1| 318|Caenorhabditis elegans Ground-like (grd
related) protein 9 protein.
Length = 318
Score = 29.9 bits (64), Expect = 4.4
Identities = 13/33 (39%), Positives = 15/33 (45%), Gaps = 4/33 (12%)
Frame = +1
Query: 1219 PXXXPPPXRX----PSXXQXXPPXXXPXPPPPP 1305
P PPP + P + PP P PPPPP
Sbjct: 114 PVQPPPPVQYQNQGPQYIEAPPPPPSPPPPPPP 146
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical protein
R04E5.8a protein.
Length = 997
Score = 29.9 bits (64), Expect = 4.4
Identities = 25/99 (25%), Positives = 27/99 (27%), Gaps = 6/99 (6%)
Frame = +1
Query: 1048 PXTXXHPLPXQXSXXHXX-PXXQXXPRKX-----CXXPXPXHXVPSXXXXXPXXXXXXLS 1209
P H +P H P PRK P P VP
Sbjct: 103 PGQEGHQVPAPQHGDHEASPPPPPPPRKSRAGGSSPPPPPPPRVPRTPPPRSPPPRRPPM 162
Query: 1210 XVPPXXXPPPXRXPSXXQXXPPXXXPXPPPPP*TAVXXH 1326
P PP PS PP P P PPP + H
Sbjct: 163 TPPSPQRRPPRTPPSPEPRNPPRTPPSPIPPPPPRLNSH 201
>U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical protein
C34D4.11 protein.
Length = 136
Score = 29.5 bits (63), Expect = 5.8
Identities = 14/30 (46%), Positives = 14/30 (46%)
Frame = -1
Query: 1304 GGGGGXGXLXGGXXXXXEGXLXGGGSXXGG 1215
GGGGG G GG G GGG GG
Sbjct: 96 GGGGGGGGRGGGGGGRGGGGGGGGGRGGGG 125
Score = 29.1 bits (62), Expect = 7.7
Identities = 14/30 (46%), Positives = 14/30 (46%)
Frame = -1
Query: 1304 GGGGGXGXLXGGXXXXXEGXLXGGGSXXGG 1215
GGGGG G GG G GGG GG
Sbjct: 95 GGGGGGGGGRGGGGGGRGGGGGGGGGRGGG 124
>Z83227-3|CAB05726.2| 241|Caenorhabditis elegans Hypothetical protein
F45B8.3 protein.
Length = 241
Score = 29.1 bits (62), Expect = 7.7
Identities = 13/31 (41%), Positives = 13/31 (41%)
Frame = +1
Query: 1213 VPPXXXPPPXRXPSXXQXXPPXXXPXPPPPP 1305
VPP PPP S P P PPPP
Sbjct: 84 VPPAPLPPPPPPASPCCGPSPVPAPCCPPPP 114
>Z77655-1|CAB01137.1| 393|Caenorhabditis elegans Hypothetical protein
C56A3.1 protein.
Length = 393
Score = 29.1 bits (62), Expect = 7.7
Identities = 14/30 (46%), Positives = 14/30 (46%)
Frame = -1
Query: 1304 GGGGGXGXLXGGXXXXXEGXLXGGGSXXGG 1215
GGGGG G GG G GGG GG
Sbjct: 103 GGGGGCGGGGGGGCGGGGGGGCGGGGGGGG 132
>U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical protein
C50F7.5 protein.
Length = 309
Score = 29.1 bits (62), Expect = 7.7
Identities = 12/30 (40%), Positives = 12/30 (40%)
Frame = +1
Query: 1216 PPXXXPPPXRXPSXXQXXPPXXXPXPPPPP 1305
PP PP R P P P PP PP
Sbjct: 246 PPGPPGPPTRRPPGPPGPPTRRPPGPPGPP 275
>U27312-9|AAA68252.1| 239|Caenorhabditis elegans Hypothetical protein
F26A1.11 protein.
Length = 239
Score = 29.1 bits (62), Expect = 7.7
Identities = 13/30 (43%), Positives = 16/30 (53%), Gaps = 2/30 (6%)
Frame = +2
Query: 1232 PPQXEXPXTXSXX--PPPXXPXRRPXPKQP 1315
PP+ P + S PPP P R P P+QP
Sbjct: 33 PPRPPRPPSPSRPQRPPPSRPQRPPPPRQP 62
>AF045646-2|AAK29827.1| 371|Caenorhabditis elegans Collagen protein
103 protein.
Length = 371
Score = 29.1 bits (62), Expect = 7.7
Identities = 14/30 (46%), Positives = 14/30 (46%)
Frame = -1
Query: 1304 GGGGGXGXLXGGXXXXXEGXLXGGGSXXGG 1215
GGGGG G GG G GGG GG
Sbjct: 100 GGGGGYGGGHGGGHGGAVGGGYGGGGGGGG 129
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,590,993
Number of Sequences: 27780
Number of extensions: 110283
Number of successful extensions: 1929
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 549
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1375
length of database: 12,740,198
effective HSP length: 84
effective length of database: 10,406,678
effective search space used: 3881690894
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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