Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP11_F_E18
         (784 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_01_0265 + 2046918-2049102,2052385-2052452,2052542-2052652,205...    28   7.3  

>03_01_0265 +
           2046918-2049102,2052385-2052452,2052542-2052652,
           2053164-2053250,2053476-2053684,2054115-2054340,
           2054473-2054510,2054657-2054714,2055363-2055662,
           2055832-2055903,2055988-2056112,2056240-2056312,
           2056417-2056521
          Length = 1218

 Score = 28.3 bits (60), Expect = 7.3
 Identities = 16/53 (30%), Positives = 26/53 (49%)
 Frame = +1

Query: 64  ILQYCIVHCFYKMLTKNITNLFIRNSTLNKNYGFLRNFSLTASKNDIVKIQST 222
           I+Q+C++     ML       F     L K+Y F + FSLT + N  + + +T
Sbjct: 709 IMQFCVIFFLVAMLL-----FFAVQDLLYKDYNFDQKFSLTTTSNSGLGLTAT 756


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,218,646
Number of Sequences: 37544
Number of extensions: 161642
Number of successful extensions: 156
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 156
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 156
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2103658836
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)