Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP11_F_E15
(858 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_04_1590 - 34640923-34641735,34642313-34642774,34643648-34643908 133 2e-31
10_08_0999 + 22121029-22121235,22121819-22122082,22122123-221223... 91 8e-19
07_01_0579 + 4299104-4299652,4300845-4300935,4301018-4301211,430... 79 6e-15
01_06_0140 - 26881282-26881290,26882027-26882128,26882816-268829... 77 2e-14
12_01_0297 - 2244793-2244945,2245337-2245396,2245529-2245628,224... 74 1e-13
01_01_1205 - 9693702-9694517,9694591-9695076,9697014-9697095,969... 73 4e-13
11_01_0296 - 2222329-2222481,2222777-2222836,2222965-2223064,222... 71 2e-12
11_01_0724 + 5981680-5981748,5982301-5982397,5982496-5982593,598... 65 6e-11
03_02_0854 - 11789850-11790524,11790602-11791063,11793119-11793328 54 1e-07
12_01_0812 - 7460448-7460507,7460595-7460672,7460772-7460981,746... 29 4.7
07_01_0989 + 8348706-8348882,8348988-8349028,8350071-8350120,835... 29 4.7
06_01_0462 - 3285667-3288123 29 6.3
12_02_1084 - 25928373-25928426,25928551-25928652,25928913-259290... 28 8.3
>04_04_1590 - 34640923-34641735,34642313-34642774,34643648-34643908
Length = 511
Score = 133 bits (321), Expect = 2e-31
Identities = 73/172 (42%), Positives = 106/172 (61%), Gaps = 2/172 (1%)
Frame = +2
Query: 251 IDSKSSYIRLSGIICTIGPASRNVAVLEKMMETGMNVARMNFSHGSHEYHAXTIRNCREA 430
+++ + + + ++CT+GPASR+V +LEK++ GMNVAR NFSHG+HEYH T+ N R+A
Sbjct: 13 LENDDARVPKTKLVCTLGPASRSVPMLEKLLRAGMNVARFNFSHGTHEYHQETLDNLRQA 72
Query: 431 EKSYSAKLGSPFSLAIALDTKGPEIRTGLLEGGGSAEVELKKGETIKLTTSSDYQEKGNA 610
+ + A+ LDTKGPEIRTG L+ G ++L KG+ +LT ++DY+ KG+
Sbjct: 73 MHN------TGVLCAVMLDTKGPEIRTGFLKDG--KPIKLTKGQ--ELTVTTDYEIKGDE 122
Query: 611 DTIYVDYKNITNVVKPGNRIXIDDGLISIICQSV--SADXLTCTIXNRXMLG 760
+ I + YK + VKPGN I DG IS+ S A + C N MLG
Sbjct: 123 NMITMSYKKLPVDVKPGNVILCADGTISLTVLSCDPKAGTVRCRCENTAMLG 174
>10_08_0999 +
22121029-22121235,22121819-22122082,22122123-22122324,
22122456-22122590,22122668-22122778,22122871-22122959,
22123237-22123299,22123461-22123636,22123785-22123887,
22124286-22124461,22124625-22124733,22124851-22124943,
22126294-22126435,22126655-22126671
Length = 628
Score = 91.5 bits (217), Expect = 8e-19
Identities = 61/177 (34%), Positives = 95/177 (53%), Gaps = 8/177 (4%)
Frame = +2
Query: 275 RLSGIICTIGPASRNVAVLEKMMETGMNVARMNFSHGSHEYHAXTIRNCREAEKSYSAKL 454
R + I+CTIGP++ ++ K+ ETGMNVARMN SHG H+ H I + K Y+AK
Sbjct: 89 RKTKIVCTIGPSTNTREMIWKLAETGMNVARMNMSHGDHQSHQKVI----DLVKEYNAKN 144
Query: 455 GSPFSLAIALDTK--GPEIRTGLLEG-----GGSAE-VELKKGETIKLTTSSDYQEKGNA 610
+AI LDTK + RT +++G G E + L++G+ T K
Sbjct: 145 TDGNVIAIMLDTKQMSCDDRTSVMQGPEVRSGDVPEPIMLEEGQEFNFTIKRGVSTK--- 201
Query: 611 DTIYVDYKNITNVVKPGNRIXIDDGLISIICQSVSADXLTCTIXNRXMLGIPEXRHL 781
DT+ V+Y + N V+ G+ + +D G++S+ +S +AD + C + + L RHL
Sbjct: 202 DTVSVNYDDFINDVEVGDILLVDGGMMSLAVKSKTADTVKCEVVDGGEL--KSRRHL 256
>07_01_0579 +
4299104-4299652,4300845-4300935,4301018-4301211,
4301501-4301622,4302378-4302856,4303033-4303334
Length = 578
Score = 78.6 bits (185), Expect = 6e-15
Identities = 45/138 (32%), Positives = 73/138 (52%)
Frame = +2
Query: 275 RLSGIICTIGPASRNVAVLEKMMETGMNVARMNFSHGSHEYHAXTIRNCREAEKSYSAKL 454
R + ++CT+GPA+ LE + GMNVAR+N HG E+H IR R +
Sbjct: 99 RRTKLVCTVGPATCGADELEALAVGGMNVARVNMCHGDREWHRGVIRAVRRLNEE----- 153
Query: 455 GSPFSLAIALDTKGPEIRTGLLEGGGSAEVELKKGETIKLTTSSDYQEKGNADTIYVDYK 634
F++A+ +DT+G EI G L GG+A + + GE + S ++ TI+V+Y+
Sbjct: 154 -KGFAVAVMMDTEGSEIHMGDL--GGAAAAKAEDGEIWTFSVRS-FEAPPPERTIHVNYE 209
Query: 635 NITNVVKPGNRIXIDDGL 688
V+ G+ + +D G+
Sbjct: 210 GFAEDVRVGDELLVDGGM 227
>01_06_0140 -
26881282-26881290,26882027-26882128,26882816-26882924,
26883712-26883860,26883941-26884043,26884635-26884810,
26885004-26885066,26885258-26885346,26885428-26885538,
26885610-26885744,26886415-26886580,26886788-26886856,
26886943-26887230,26888612-26888866
Length = 607
Score = 76.6 bits (180), Expect = 2e-14
Identities = 58/191 (30%), Positives = 94/191 (49%), Gaps = 16/191 (8%)
Frame = +2
Query: 257 SKSSYIRLSGIICTIGPASRNVAVLEKMMETGMNVARMNFSHGSHEYHAXTIRNCREAEK 436
SK + R + I+CTIGP++ ++ K+ E GMNVAR+N SHG H H I + K
Sbjct: 108 SKPNVRRKTKIVCTIGPSTNTKEMIWKLAEAGMNVARLNMSHGDHASHQKVI----DLVK 163
Query: 437 SYSAKLGSPFSLAIALDTKG-PEIRTGLLE-------GGGSAEVELKKG---ETIKLTTS 583
Y+A+ +AI LDTK E +LE G E++ G + I L T
Sbjct: 164 EYNAQTKDNV-IAIMLDTKSYTEYDVLMLECFFAVYASSGGIGPEVRSGDLPQPIMLETG 222
Query: 584 SDY-----QEKGNADTIYVDYKNITNVVKPGNRIXIDDGLISIICQSVSADXLTCTIXNR 748
++ + G + V+Y + N V+ G+ + +D G++S++ +S + D + C + +
Sbjct: 223 QEFTFTIKRGVGTETCVSVNYDDFVNDVEVGDMLLVDGGMMSLLVKSKTEDSVKCEVIDG 282
Query: 749 XMLGIPEXRHL 781
L RHL
Sbjct: 283 GEL--KSRRHL 291
>12_01_0297 -
2244793-2244945,2245337-2245396,2245529-2245628,
2245712-2245779,2245922-2246017,2246156-2246244,
2246320-2246464,2246643-2246732,2246816-2246887,
2247052-2247132,2247361-2247492,2247613-2247690,
2247930-2248085,2248227-2248324,2248418-2248499
Length = 499
Score = 74.1 bits (174), Expect = 1e-13
Identities = 49/168 (29%), Positives = 85/168 (50%), Gaps = 8/168 (4%)
Frame = +2
Query: 278 LSGIICTIGPASRNVAVLEKMMETGMNVARMNFSHGSHEYHAXTIRNCREAEKSYSAKLG 457
++ I+ T+GP SR+V + ++ GM+VAR +FS G EYH T+ N + A KS + KL
Sbjct: 1 MTKIVGTLGPKSRSVDTISSCLKAGMSVARFDFSWGDAEYHQETLENLKVAIKS-TKKL- 58
Query: 458 SPFSLAIALDTKGPEIRTGLLEGGGSAEVELKKGETIKLTTSSDYQEKGNADTIYVDYKN 637
A+ LDT GPE++ + A + L++ T+ LT D ++ ++ + +++
Sbjct: 59 ----CAVMLDTVGPELQ---VVNKSEASISLEENGTVILT--PDQGQEASSQVLPINFAG 109
Query: 638 ITNVVKPGNRIXIDDGLIS--------IICQSVSADXLTCTIXNRXML 757
+ VKPG+ I + L + + + D + C I N L
Sbjct: 110 LAKAVKPGDTIFVGQYLFTGSETTSVWLEVSQIKGDDVVCVIKNTATL 157
>01_01_1205 -
9693702-9694517,9694591-9695076,9697014-9697095,
9697876-9698051,9698326-9698580
Length = 604
Score = 72.5 bits (170), Expect = 4e-13
Identities = 36/78 (46%), Positives = 50/78 (64%)
Frame = +2
Query: 287 IICTIGPASRNVAVLEKMMETGMNVARMNFSHGSHEYHAXTIRNCREAEKSYSAKLGSPF 466
I+CT+GPASR+V ++ +++ GM VAR NFSHGSHEYH T+ N R A +S +
Sbjct: 23 IVCTLGPASRSVEMIGRLLRAGMCVARFNFSHGSHEYHQETLDNLRAAMES------TGI 76
Query: 467 SLAIALDTKGPEIRTGLL 520
A+ LDTK + G+L
Sbjct: 77 LCAVMLDTKARDFVLGVL 94
Score = 58.8 bits (136), Expect = 5e-09
Identities = 37/95 (38%), Positives = 52/95 (54%), Gaps = 2/95 (2%)
Frame = +2
Query: 482 LDTKGPEIRTGLLEGGGSAEVELKKGETIKLTTSSDYQEKGNADTIYVDYKNITNVVKPG 661
L +GPEIRTG L+ G V+LKKG+ I T S+DY KG+ + I + YK + +KPG
Sbjct: 176 LKIQGPEIRTGFLKDG--KPVQLKKGQEI--TVSTDYSIKGDDNMISMSYKKLAVDLKPG 231
Query: 662 NRIXIDDGLISIICQSVSAD--XLTCTIXNRXMLG 760
+ I DG I++ + + C N MLG
Sbjct: 232 SVILCADGTITLTVLHCDKEQGLVRCRCENTAMLG 266
>11_01_0296 -
2222329-2222481,2222777-2222836,2222965-2223064,
2223152-2223219,2223369-2223464,2223603-2223691,
2223762-2223906,2224100-2224189,2224271-2224342,
2224543-2224623,2224766-2224897,2225026-2225103,
2225280-2225435,2225521-2225618,2225712-2225793
Length = 499
Score = 70.5 bits (165), Expect = 2e-12
Identities = 49/168 (29%), Positives = 83/168 (49%), Gaps = 8/168 (4%)
Frame = +2
Query: 278 LSGIICTIGPASRNVAVLEKMMETGMNVARMNFSHGSHEYHAXTIRNCREAEKSYSAKLG 457
++ I+ T+GP SR V + ++ GM+VAR +FS G EYH T+ N + A KS + KL
Sbjct: 1 MTKIVGTLGPKSRAVDTISSCLKAGMSVARFDFSWGDAEYHQETLENLKLAIKS-TKKL- 58
Query: 458 SPFSLAIALDTKGPEIRTGLLEGGGSAEVELKKGETIKLTTSSDYQEKGNADTIYVDYKN 637
A+ LDT GPE++ + A + L+ T+ LT D ++ +++ + +++
Sbjct: 59 ----CAVMLDTVGPELQ---VVNKSEAAISLEANGTVVLT--PDQGQEASSELLPINFSG 109
Query: 638 ITNVVKPGNRIXIDDGLIS--------IICQSVSADXLTCTIXNRXML 757
+ +KPG I + L + + V D + C I N L
Sbjct: 110 LAKALKPGATIFVGQYLFTGSETTSVWLEVSEVKGDDVVCVIKNSATL 157
>11_01_0724 +
5981680-5981748,5982301-5982397,5982496-5982593,
5983535-5983690,5983986-5984063,5984135-5984266,
5984856-5984936,5985442-5985510,5985597-5985686,
5986001-5986145,5986218-5986276,5986384-5986479,
5986561-5986628,5986704-5986803,5986910-5986966,
5987179-5987337
Length = 517
Score = 65.3 bits (152), Expect = 6e-11
Identities = 43/139 (30%), Positives = 73/139 (52%)
Frame = +2
Query: 278 LSGIICTIGPASRNVAVLEKMMETGMNVARMNFSHGSHEYHAXTIRNCREAEKSYSAKLG 457
L+ I+ T+GP S +V V+++ + GM VAR +FS YH T+ N R+A ++ + KL
Sbjct: 29 LTKIVGTLGPNSHSVEVIQECLTAGMAVARFDFSWMDASYHQETLNNLRKAAQNVN-KL- 86
Query: 458 SPFSLAIALDTKGPEIRTGLLEGGGSAEVELKKGETIKLTTSSDYQEKGNADTIYVDYKN 637
+ LDT GPEI+ GG +ELK G + +T D + +++ + + +
Sbjct: 87 ----CPVMLDTLGPEIQVHNSTGG---PIELKAGNHVTIT--PDLSKAPSSEILPIKFGG 137
Query: 638 ITNVVKPGNRIXIDDGLIS 694
+ VK G+ + I L +
Sbjct: 138 LAKAVKKGDTLFIGQYLFT 156
>03_02_0854 - 11789850-11790524,11790602-11791063,11793119-11793328
Length = 448
Score = 54.4 bits (125), Expect = 1e-07
Identities = 33/91 (36%), Positives = 49/91 (53%), Gaps = 2/91 (2%)
Frame = +2
Query: 494 GPEIRTGLLEGGGSAEVELKKGETIKLTTSSDYQEKGNADTIYVDYKNITNVVKPGNRIX 673
GPEIRTG L+ G ++LK+G+ I +T DY KG+ + I + Y + +KPG+ I
Sbjct: 71 GPEIRTGFLKDG--KPIQLKQGKEITITI--DYSIKGDENLISMSYHKLAIDLKPGSTIL 126
Query: 674 IDDGLISIICQSVSAD--XLTCTIXNRXMLG 760
DG I++ S + + C N MLG
Sbjct: 127 CADGTITLTVLSCDCEQGLVRCRCENSAMLG 157
>12_01_0812 -
7460448-7460507,7460595-7460672,7460772-7460981,
7461095-7461142,7461270-7461455,7461653-7461656,
7461766-7461893
Length = 237
Score = 29.1 bits (62), Expect = 4.7
Identities = 18/70 (25%), Positives = 34/70 (48%), Gaps = 1/70 (1%)
Frame = -3
Query: 769 FRDPEHTSVXNGTXKXVSADRLTDDRDEAIIDXDSVSWLHDIRYVLVVHVNCISIAFLLI 590
FRD ++ + + + V D + D+RD +ID D + + D+ + + + C + F
Sbjct: 103 FRDQVYSELKDKITRTV-VDMINDERDGKVIDRDLLKDVLDVYVQIGLGMECYEVDFENA 161
Query: 589 IR-TCRQLYS 563
R + R YS
Sbjct: 162 FRESTRNYYS 171
>07_01_0989 +
8348706-8348882,8348988-8349028,8350071-8350120,
8350502-8350646,8351570-8351626,8352141-8352261,
8352436-8352945,8353242-8353289
Length = 382
Score = 29.1 bits (62), Expect = 4.7
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = -1
Query: 531 PPPSKSPVLISGPLVSNAMAKEKGEPSL 448
PPP+ SP L S P+ S +++EK +L
Sbjct: 335 PPPNPSPSLASAPVYSPVLSREKVRDAL 362
>06_01_0462 - 3285667-3288123
Length = 818
Score = 28.7 bits (61), Expect = 6.3
Identities = 15/43 (34%), Positives = 21/43 (48%)
Frame = +2
Query: 560 ETIKLTTSSDYQEKGNADTIYVDYKNITNVVKPGNRIXIDDGL 688
E K S+Y E G+ D + DY N+ V+K R I G+
Sbjct: 598 EKTKRLLVSEYSENGSLDRLLFDYHNLFPVLKWSQRYNIALGV 640
>12_02_1084 -
25928373-25928426,25928551-25928652,25928913-25929039,
25929292-25930730,25931430-25931447
Length = 579
Score = 28.3 bits (60), Expect = 8.3
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = +2
Query: 260 KSSYIRLSGIICTIGPASRNVAVLEK 337
K + IRL+ IIC P + VAVL+K
Sbjct: 481 KRNEIRLTNIICQFNPLVQQVAVLKK 506
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,651,584
Number of Sequences: 37544
Number of extensions: 435539
Number of successful extensions: 1359
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1302
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1352
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2397465936
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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