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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP11_F_E13
         (869 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def...    33   0.20 
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def...    33   0.20 
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.    33   0.20 
Z46676-8|CAB60993.2|  388|Caenorhabditis elegans Hypothetical pr...    32   0.46 
U24189-3|AAC47514.1|  398|Caenorhabditis elegans RRM-type RNA bi...    32   0.46 
Z30317-2|CAA82968.2| 1142|Caenorhabditis elegans Hypothetical pr...    32   0.61 
AF000298-11|AAM97960.1|  518|Caenorhabditis elegans Prion-like-(...    32   0.61 
AF000298-10|AAM97961.1|  539|Caenorhabditis elegans Prion-like-(...    32   0.61 
AF000298-8|AAC48255.2|  524|Caenorhabditis elegans Prion-like-(q...    32   0.61 
Z12018-1|CAD88219.2|  774|Caenorhabditis elegans Hypothetical pr...    31   1.4  
Z11126-8|CAD88221.2|  774|Caenorhabditis elegans Hypothetical pr...    31   1.4  
U40799-6|AAA81484.2|  210|Caenorhabditis elegans Ground-like (gr...    30   1.9  
Z74031-17|CAN86923.1|  380|Caenorhabditis elegans Hypothetical p...    30   2.5  
Z74031-16|CAA98452.1|  378|Caenorhabditis elegans Hypothetical p...    30   2.5  
AF000198-8|AAP68908.1|  435|Caenorhabditis elegans Collagen prot...    30   2.5  
Z81053-1|CAB02877.1|  385|Caenorhabditis elegans Hypothetical pr...    29   3.3  
U41543-12|AAZ91345.1|  401|Caenorhabditis elegans Groundhog (hed...    29   3.3  
Z67995-6|CAA91946.1| 2692|Caenorhabditis elegans Hypothetical pr...    29   5.7  
Z67737-7|CAA91543.1| 2692|Caenorhabditis elegans Hypothetical pr...    29   5.7  
U58755-7|AAB00696.1|  136|Caenorhabditis elegans Hypothetical pr...    29   5.7  
U00063-8|AAM48535.1| 1031|Caenorhabditis elegans Hypothetical pr...    28   10.0 
U00063-7|AAK18965.1| 1028|Caenorhabditis elegans Hypothetical pr...    28   10.0 

>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
           protein 1, isoformb protein.
          Length = 1437

 Score = 33.5 bits (73), Expect = 0.20
 Identities = 16/48 (33%), Positives = 16/48 (33%)
 Frame = +3

Query: 660 PXXXPXPPXXPPXXXXXPXPXPSFXFXXXXGXXXAXFPPPXTXXPPPP 803
           P   P P   PP     P P P        G      PPP    PPPP
Sbjct: 726 PPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPP 773



 Score = 29.9 bits (64), Expect = 2.5
 Identities = 16/48 (33%), Positives = 17/48 (35%), Gaps = 4/48 (8%)
 Frame = +3

Query: 672 PXPPXXPPXXXXXPXPXPSFXFXXXXGXXXAXFP----PPXTXXPPPP 803
           P PP  PP     P P P        G      P    PP +  PPPP
Sbjct: 714 PPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPP 761


>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
           protein 1, isoforma protein.
          Length = 1435

 Score = 33.5 bits (73), Expect = 0.20
 Identities = 16/48 (33%), Positives = 16/48 (33%)
 Frame = +3

Query: 660 PXXXPXPPXXPPXXXXXPXPXPSFXFXXXXGXXXAXFPPPXTXXPPPP 803
           P   P P   PP     P P P        G      PPP    PPPP
Sbjct: 726 PPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPP 773



 Score = 29.9 bits (64), Expect = 2.5
 Identities = 16/48 (33%), Positives = 17/48 (35%), Gaps = 4/48 (8%)
 Frame = +3

Query: 672 PXPPXXPPXXXXXPXPXPSFXFXXXXGXXXAXFP----PPXTXXPPPP 803
           P PP  PP     P P P        G      P    PP +  PPPP
Sbjct: 714 PPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPP 761


>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
          Length = 1018

 Score = 33.5 bits (73), Expect = 0.20
 Identities = 16/48 (33%), Positives = 16/48 (33%)
 Frame = +3

Query: 660 PXXXPXPPXXPPXXXXXPXPXPSFXFXXXXGXXXAXFPPPXTXXPPPP 803
           P   P P   PP     P P P        G      PPP    PPPP
Sbjct: 309 PPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPP 356



 Score = 29.9 bits (64), Expect = 2.5
 Identities = 16/48 (33%), Positives = 17/48 (35%), Gaps = 4/48 (8%)
 Frame = +3

Query: 672 PXPPXXPPXXXXXPXPXPSFXFXXXXGXXXAXFP----PPXTXXPPPP 803
           P PP  PP     P P P        G      P    PP +  PPPP
Sbjct: 297 PPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPP 344


>Z46676-8|CAB60993.2|  388|Caenorhabditis elegans Hypothetical
           protein C08B11.5 protein.
          Length = 388

 Score = 32.3 bits (70), Expect = 0.46
 Identities = 18/55 (32%), Positives = 18/55 (32%)
 Frame = +3

Query: 657 PPXXXPXPPXXPPXXXXXPXPXPSFXFXXXXGXXXAXFPPPXTXXPPPPXXXXSP 821
           PP   P PP  PP     P P P        G      PPP    P PP     P
Sbjct: 267 PPSVTPMPPPMPPTPGMTPRPPP----PPSSGMWPPPPPPPPGRTPGPPGMPGMP 317


>U24189-3|AAC47514.1|  398|Caenorhabditis elegans RRM-type RNA
           binding protein protein.
          Length = 398

 Score = 32.3 bits (70), Expect = 0.46
 Identities = 18/55 (32%), Positives = 18/55 (32%)
 Frame = +3

Query: 657 PPXXXPXPPXXPPXXXXXPXPXPSFXFXXXXGXXXAXFPPPXTXXPPPPXXXXSP 821
           PP   P PP  PP     P P P        G      PPP    P PP     P
Sbjct: 277 PPSVTPMPPPMPPTPGMTPRPPP----PPSSGMWPPPPPPPPGRTPGPPGMPGMP 327


>Z30317-2|CAA82968.2| 1142|Caenorhabditis elegans Hypothetical protein
            T16G12.5 protein.
          Length = 1142

 Score = 31.9 bits (69), Expect = 0.61
 Identities = 19/60 (31%), Positives = 28/60 (46%), Gaps = 4/60 (6%)
 Frame = +1

Query: 178  PKEDNSLNTLAESAKKTIEELREKVESALAP----ETVKKNFGTMVDSFNEFYKNLKPAE 345
            P ED S N   + AKK + +L+  V    AP     T ++ +   VD  NE+ + L   E
Sbjct: 834  PSEDVSFNLAVDEAKKLLRDLKIDVNQVNAPTLPQRTDRQRYNQQVDVCNEWIEELHDDE 893


>AF000298-11|AAM97960.1|  518|Caenorhabditis elegans
           Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
           isoform b protein.
          Length = 518

 Score = 31.9 bits (69), Expect = 0.61
 Identities = 19/58 (32%), Positives = 19/58 (32%), Gaps = 3/58 (5%)
 Frame = +3

Query: 657 PPXXXPXPPXXP---PXXXXXPXPXPSFXFXXXXGXXXAXFPPPXTXXPPPPXXXXSP 821
           PP   P PP  P   P       P P               PPP T  PPPP    SP
Sbjct: 232 PPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSP 289



 Score = 28.3 bits (60), Expect = 7.5
 Identities = 15/54 (27%), Positives = 16/54 (29%)
 Frame = +3

Query: 660 PXXXPXPPXXPPXXXXXPXPXPSFXFXXXXGXXXAXFPPPXTXXPPPPXXXXSP 821
           P   P P   PP       P P            +  PPP    PPPP     P
Sbjct: 237 PPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPP 290



 Score = 28.3 bits (60), Expect = 7.5
 Identities = 19/59 (32%), Positives = 19/59 (32%), Gaps = 4/59 (6%)
 Frame = +3

Query: 657 PPXXXPXPPXX----PPXXXXXPXPXPSFXFXXXXGXXXAXFPPPXTXXPPPPXXXXSP 821
           PP   P PP      PP     P P P        G      PPP     PPP    SP
Sbjct: 275 PPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGS----LPPPQAGGSPPPAGTGSP 329


>AF000298-10|AAM97961.1|  539|Caenorhabditis elegans
           Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
           isoform c protein.
          Length = 539

 Score = 31.9 bits (69), Expect = 0.61
 Identities = 19/58 (32%), Positives = 19/58 (32%), Gaps = 3/58 (5%)
 Frame = +3

Query: 657 PPXXXPXPPXXP---PXXXXXPXPXPSFXFXXXXGXXXAXFPPPXTXXPPPPXXXXSP 821
           PP   P PP  P   P       P P               PPP T  PPPP    SP
Sbjct: 253 PPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSP 310



 Score = 28.3 bits (60), Expect = 7.5
 Identities = 15/54 (27%), Positives = 16/54 (29%)
 Frame = +3

Query: 660 PXXXPXPPXXPPXXXXXPXPXPSFXFXXXXGXXXAXFPPPXTXXPPPPXXXXSP 821
           P   P P   PP       P P            +  PPP    PPPP     P
Sbjct: 258 PPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPP 311



 Score = 28.3 bits (60), Expect = 7.5
 Identities = 19/59 (32%), Positives = 19/59 (32%), Gaps = 4/59 (6%)
 Frame = +3

Query: 657 PPXXXPXPPXX----PPXXXXXPXPXPSFXFXXXXGXXXAXFPPPXTXXPPPPXXXXSP 821
           PP   P PP      PP     P P P        G      PPP     PPP    SP
Sbjct: 296 PPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGS----LPPPQAGGSPPPAGTGSP 350


>AF000298-8|AAC48255.2|  524|Caenorhabditis elegans
           Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
           isoform a protein.
          Length = 524

 Score = 31.9 bits (69), Expect = 0.61
 Identities = 19/58 (32%), Positives = 19/58 (32%), Gaps = 3/58 (5%)
 Frame = +3

Query: 657 PPXXXPXPPXXP---PXXXXXPXPXPSFXFXXXXGXXXAXFPPPXTXXPPPPXXXXSP 821
           PP   P PP  P   P       P P               PPP T  PPPP    SP
Sbjct: 238 PPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSP 295



 Score = 28.3 bits (60), Expect = 7.5
 Identities = 15/54 (27%), Positives = 16/54 (29%)
 Frame = +3

Query: 660 PXXXPXPPXXPPXXXXXPXPXPSFXFXXXXGXXXAXFPPPXTXXPPPPXXXXSP 821
           P   P P   PP       P P            +  PPP    PPPP     P
Sbjct: 243 PPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPP 296



 Score = 28.3 bits (60), Expect = 7.5
 Identities = 19/59 (32%), Positives = 19/59 (32%), Gaps = 4/59 (6%)
 Frame = +3

Query: 657 PPXXXPXPPXX----PPXXXXXPXPXPSFXFXXXXGXXXAXFPPPXTXXPPPPXXXXSP 821
           PP   P PP      PP     P P P        G      PPP     PPP    SP
Sbjct: 281 PPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGS----LPPPQAGGSPPPAGTGSP 335


>Z12018-1|CAD88219.2|  774|Caenorhabditis elegans Hypothetical
           protein ZK643.8 protein.
          Length = 774

 Score = 30.7 bits (66), Expect = 1.4
 Identities = 19/49 (38%), Positives = 19/49 (38%)
 Frame = -2

Query: 802 GGGGXXVXGGGKXAXXXPXXXXKXKEGXGXGXXXFXGGXXGGXGXXXGG 656
           GGGG    GGG  A   P        G G G     GG  GG G   GG
Sbjct: 60  GGGGGGCGGGGGCA-PPPAPCGGGCGGGGGGCGGGGGGCGGGGGCGGGG 107



 Score = 27.9 bits (59), Expect = 10.0
 Identities = 18/63 (28%), Positives = 18/63 (28%)
 Frame = -1

Query: 866 GGXXXXXXGXXXXPKRXXXXXXGGGXXCXGXGKXXXXXPRXXGKXKGRXGXGGXXXXGGX 687
           GG      G    P        GGG  C G G          G   G  G GG    GG 
Sbjct: 63  GGGCGGGGGCAPPPAPCGGGCGGGGGGCGGGGGGCGGGGGCGGGGGGCGGGGGGCGGGGG 122

Query: 686 XXG 678
             G
Sbjct: 123 GCG 125


>Z11126-8|CAD88221.2|  774|Caenorhabditis elegans Hypothetical
           protein ZK643.8 protein.
          Length = 774

 Score = 30.7 bits (66), Expect = 1.4
 Identities = 19/49 (38%), Positives = 19/49 (38%)
 Frame = -2

Query: 802 GGGGXXVXGGGKXAXXXPXXXXKXKEGXGXGXXXFXGGXXGGXGXXXGG 656
           GGGG    GGG  A   P        G G G     GG  GG G   GG
Sbjct: 60  GGGGGGCGGGGGCA-PPPAPCGGGCGGGGGGCGGGGGGCGGGGGCGGGG 107



 Score = 27.9 bits (59), Expect = 10.0
 Identities = 18/63 (28%), Positives = 18/63 (28%)
 Frame = -1

Query: 866 GGXXXXXXGXXXXPKRXXXXXXGGGXXCXGXGKXXXXXPRXXGKXKGRXGXGGXXXXGGX 687
           GG      G    P        GGG  C G G          G   G  G GG    GG 
Sbjct: 63  GGGCGGGGGCAPPPAPCGGGCGGGGGGCGGGGGGCGGGGGCGGGGGGCGGGGGGCGGGGG 122

Query: 686 XXG 678
             G
Sbjct: 123 GCG 125


>U40799-6|AAA81484.2|  210|Caenorhabditis elegans Ground-like (grd
           related) protein 4 protein.
          Length = 210

 Score = 30.3 bits (65), Expect = 1.9
 Identities = 15/50 (30%), Positives = 15/50 (30%)
 Frame = +3

Query: 672 PXPPXXPPXXXXXPXPXPSFXFXXXXGXXXAXFPPPXTXXPPPPXXXXSP 821
           P PP  PP     P P P                PP    PPPP     P
Sbjct: 29  PCPPPPPPMCAPPPLPCPPPPICPPQFCPPPPMCPPPPPPPPPPMCPPPP 78



 Score = 29.9 bits (64), Expect = 2.5
 Identities = 17/52 (32%), Positives = 17/52 (32%), Gaps = 3/52 (5%)
 Frame = +3

Query: 657 PPXXXPXPPXXPPXXXXXPXP---XPSFXFXXXXGXXXAXFPPPXTXXPPPP 803
           PP   P PP   P     P P    P F             PPP    PPPP
Sbjct: 28  PPCPPPPPPMCAPPPLPCPPPPICPPQFCPPPPMCPPPPPPPPPPMCPPPPP 79



 Score = 29.9 bits (64), Expect = 2.5
 Identities = 18/55 (32%), Positives = 18/55 (32%)
 Frame = +3

Query: 657 PPXXXPXPPXXPPXXXXXPXPXPSFXFXXXXGXXXAXFPPPXTXXPPPPXXXXSP 821
           PP   P PP  PP     P   P               PPP    PPPP    SP
Sbjct: 41  PPLPCPPPPICPPQFCPPPPMCPP---------PPPPPPPPMCPPPPPPMPSYSP 86


>Z74031-17|CAN86923.1|  380|Caenorhabditis elegans Hypothetical
           protein F32D8.7b protein.
          Length = 380

 Score = 29.9 bits (64), Expect = 2.5
 Identities = 11/18 (61%), Positives = 11/18 (61%)
 Frame = +3

Query: 771 PPPXTXXPPPPXXXXSPF 824
           PPP T  PPPP    SPF
Sbjct: 242 PPPTTPPPPPPPPAPSPF 259


>Z74031-16|CAA98452.1|  378|Caenorhabditis elegans Hypothetical
           protein F32D8.7a protein.
          Length = 378

 Score = 29.9 bits (64), Expect = 2.5
 Identities = 11/18 (61%), Positives = 11/18 (61%)
 Frame = +3

Query: 771 PPPXTXXPPPPXXXXSPF 824
           PPP T  PPPP    SPF
Sbjct: 240 PPPTTPPPPPPPPAPSPF 257


>AF000198-8|AAP68908.1|  435|Caenorhabditis elegans Collagen protein
           51 protein.
          Length = 435

 Score = 29.9 bits (64), Expect = 2.5
 Identities = 16/49 (32%), Positives = 17/49 (34%)
 Frame = -2

Query: 802 GGGGXXVXGGGKXAXXXPXXXXKXKEGXGXGXXXFXGGXXGGXGXXXGG 656
           GGGG    GGG           +   G   G     GG  GG G   GG
Sbjct: 322 GGGGDFPAGGGGGGYSTGGGGGRADSGGAAGGAGGAGGYSGGGGGGGGG 370


>Z81053-1|CAB02877.1|  385|Caenorhabditis elegans Hypothetical
           protein E02A10.2 protein.
          Length = 385

 Score = 29.5 bits (63), Expect = 3.3
 Identities = 19/56 (33%), Positives = 19/56 (33%), Gaps = 1/56 (1%)
 Frame = -2

Query: 820 GXXXXXGGGGXXVXGGG-KXAXXXPXXXXKXKEGXGXGXXXFXGGXXGGXGXXXGG 656
           G     GGGG    GGG       P        G G G     GG  GG G   GG
Sbjct: 88  GGGGCGGGGGGCGGGGGCGGGCAPPPPPPACGGGCGGGGGGCGGGCGGGGGGGCGG 143



 Score = 27.9 bits (59), Expect = 10.0
 Identities = 20/58 (34%), Positives = 20/58 (34%), Gaps = 3/58 (5%)
 Frame = -2

Query: 820 GXXXXXGGGGXXVXG---GGKXAXXXPXXXXKXKEGXGXGXXXFXGGXXGGXGXXXGG 656
           G     GGGG    G   GG  A   P        G G G     GG  GG G   GG
Sbjct: 31  GCGGGCGGGGGCGGGGGCGGGCAPPPPPPACGGGCGGGGGGCGGGGGGCGGGGGCGGG 88


>U41543-12|AAZ91345.1|  401|Caenorhabditis elegans Groundhog
           (hedgehog-like family)protein 7 protein.
          Length = 401

 Score = 29.5 bits (63), Expect = 3.3
 Identities = 15/51 (29%), Positives = 18/51 (35%)
 Frame = +3

Query: 672 PXPPXXPPXXXXXPXPXPSFXFXXXXGXXXAXFPPPXTXXPPPPXXXXSPF 824
           P PP  P      P P P +            +PPP    PPPP    S +
Sbjct: 110 PAPPPAPYPQHAVPAPAP-YQQQPPPPPPPPHYPPPPPHYPPPPPAPHSAY 159


>Z67995-6|CAA91946.1| 2692|Caenorhabditis elegans Hypothetical
           protein T01H10.8 protein.
          Length = 2692

 Score = 28.7 bits (61), Expect = 5.7
 Identities = 16/57 (28%), Positives = 26/57 (45%)
 Frame = +1

Query: 184 EDNSLNTLAESAKKTIEELREKVESALAPETVKKNFGTMVDSFNEFYKNLKPAEAPK 354
           E++S   L    K TI   +      L  +  K  FG ++D FN  + NL+ ++  K
Sbjct: 125 EEDSQILLLRLLKTTISS-KSNYHHRLVLDECKVGFGMLIDDFNNGFNNLEKSDVRK 180


>Z67737-7|CAA91543.1| 2692|Caenorhabditis elegans Hypothetical
           protein T01H10.8 protein.
          Length = 2692

 Score = 28.7 bits (61), Expect = 5.7
 Identities = 16/57 (28%), Positives = 26/57 (45%)
 Frame = +1

Query: 184 EDNSLNTLAESAKKTIEELREKVESALAPETVKKNFGTMVDSFNEFYKNLKPAEAPK 354
           E++S   L    K TI   +      L  +  K  FG ++D FN  + NL+ ++  K
Sbjct: 125 EEDSQILLLRLLKTTISS-KSNYHHRLVLDECKVGFGMLIDDFNNGFNNLEKSDVRK 180


>U58755-7|AAB00696.1|  136|Caenorhabditis elegans Hypothetical
           protein C34D4.11 protein.
          Length = 136

 Score = 28.7 bits (61), Expect = 5.7
 Identities = 17/55 (30%), Positives = 18/55 (32%)
 Frame = -2

Query: 820 GXXXXXGGGGXXVXGGGKXAXXXPXXXXKXKEGXGXGXXXFXGGXXGGXGXXXGG 656
           G     GG G    GGG           +   G G G     GG  GG G   GG
Sbjct: 76  GGGGNWGGNGGGGNGGGGRGGGGGGGGGRGGGGGGRGGGGGGGGGRGGGGGGRGG 130



 Score = 27.9 bits (59), Expect = 10.0
 Identities = 17/55 (30%), Positives = 17/55 (30%)
 Frame = -2

Query: 820 GXXXXXGGGGXXVXGGGKXAXXXPXXXXKXKEGXGXGXXXFXGGXXGGXGXXXGG 656
           G     GGG     GGG               G G G     GG  GG G   GG
Sbjct: 63  GWGGGRGGGWGNNGGGGNWGGNGGGGNGGGGRGGGGGGGGGRGGGGGGRGGGGGG 117


>U00063-8|AAM48535.1| 1031|Caenorhabditis elegans Hypothetical
           protein F56C9.10b protein.
          Length = 1031

 Score = 27.9 bits (59), Expect = 10.0
 Identities = 18/44 (40%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
 Frame = +1

Query: 181 KEDNSLNTLAESAKKTIEELREKVESALAPETVK-KNF-GTMVD 306
           K+D     L E  +K  EE +EKVE  +AP   K KN  G ++D
Sbjct: 45  KKDPKPEVLEEVVEKNREEDKEKVEETVAPTIEKEKNISGDLLD 88


>U00063-7|AAK18965.1| 1028|Caenorhabditis elegans Hypothetical
           protein F56C9.10a protein.
          Length = 1028

 Score = 27.9 bits (59), Expect = 10.0
 Identities = 18/44 (40%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
 Frame = +1

Query: 181 KEDNSLNTLAESAKKTIEELREKVESALAPETVK-KNF-GTMVD 306
           K+D     L E  +K  EE +EKVE  +AP   K KN  G ++D
Sbjct: 45  KKDPKPEVLEEVVEKNREEDKEKVEETVAPTIEKEKNISGDLLD 88


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,943,523
Number of Sequences: 27780
Number of extensions: 304499
Number of successful extensions: 1159
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 753
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1002
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2181923744
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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