Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP11_F_E10
         (911 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_02_0299 - 17051570-17052474,17053542-17053755                       32   0.73 
11_01_0385 + 2915532-2916482                                           28   9.0  

>12_02_0299 - 17051570-17052474,17053542-17053755
          Length = 372

 Score = 31.9 bits (69), Expect = 0.73
 Identities = 13/29 (44%), Positives = 15/29 (51%)
 Frame = +2

Query: 668 PPXXTPXVXPPXSEPWPXYPXTCPXFLPF 754
           PP   P   PP S PWP +P   P F P+
Sbjct: 321 PPPPPPPPPPPPSFPWP-FPPLAPLFPPY 348


>11_01_0385 + 2915532-2916482
          Length = 316

 Score = 28.3 bits (60), Expect = 9.0
 Identities = 11/34 (32%), Positives = 12/34 (35%)
 Frame = +2

Query: 626 WPXPXXDYXDXXXFPPXXTPXVXPPXSEPWPXYP 727
           WP P   +     F P  TP    P    WP  P
Sbjct: 193 WPHPGNKWPPLPPFHPPPTPAWPHPGGNKWPPLP 226


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,706,119
Number of Sequences: 37544
Number of extensions: 255443
Number of successful extensions: 475
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 416
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 473
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2588957540
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)