Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP11_F_E09
(902 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY307930-1|AAQ73824.1| 340|Homo sapiens intestinal mucin MUC3A ... 33 1.9
AL590551-1|CAH71650.1| 600|Homo sapiens fibronectin type III do... 32 2.5
AF043724-1|AAC39862.1| 359|Homo sapiens hepatitis A virus cellu... 31 4.3
U50078-1|AAD12586.1| 4861|Homo sapiens p532 protein. 31 7.6
U05040-1|AAA17976.2| 644|Homo sapiens FUSE binding protein prot... 30 10.0
BC099644-1|AAH99644.1| 639|Homo sapiens keratin 2 (epidermal ic... 30 10.0
BC099643-1|AAH99643.1| 639|Homo sapiens keratin 2 (epidermal ic... 30 10.0
BC096294-1|AAH96294.1| 639|Homo sapiens keratin 2 (epidermal ic... 30 10.0
BC017247-1|AAH17247.1| 653|Homo sapiens FUBP1 protein protein. 30 10.0
AB209366-1|BAD92603.1| 493|Homo sapiens far upstream element-bi... 30 10.0
>AY307930-1|AAQ73824.1| 340|Homo sapiens intestinal mucin MUC3A
precursor protein.
Length = 340
Score = 32.7 bits (71), Expect = 1.9
Identities = 21/69 (30%), Positives = 34/69 (49%)
Frame = +1
Query: 142 TLKTPLG*WKTPTQETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVPKADLTS 321
T +TPL T + T + TT +T++ + T T+TN T++ T + P A T
Sbjct: 226 TERTPLPTGSIHTTTSPTPVFTTLKTAVTSTSSITSSITSTNTVTSMTTTASQPTATNTL 285
Query: 322 SLPLSLVLA 348
S P +L+
Sbjct: 286 SSPTRTILS 294
>AL590551-1|CAH71650.1| 600|Homo sapiens fibronectin type III
domain containing 1 protein.
Length = 600
Score = 32.3 bits (70), Expect = 2.5
Identities = 20/54 (37%), Positives = 23/54 (42%)
Frame = +1
Query: 142 TLKTPLG*WKTPTQETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVP 303
T TPL TP TAT TT + TT + T T +TT T T P
Sbjct: 161 TTTTPLPTTTTPRPTTATTRRTTTTRRTTTRRPTTTVRTTTRTTTTTTPTPTTP 214
>AF043724-1|AAC39862.1| 359|Homo sapiens hepatitis A virus cellular
receptor 1 protein.
Length = 359
Score = 31.5 bits (68), Expect = 4.3
Identities = 18/51 (35%), Positives = 26/51 (50%), Gaps = 3/51 (5%)
Frame = +1
Query: 187 TATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVP---KADLTSSLP 330
T +TT RTS +P TTT+ T + ++ T TVP T+S+P
Sbjct: 136 TTVPTVTTVRTSTTVPTTTTVPTTTVPTTMSIPTTTTVPTTMTVSTTTSVP 186
Score = 30.7 bits (66), Expect = 7.6
Identities = 23/70 (32%), Positives = 36/70 (51%)
Frame = +1
Query: 139 PTLKTPLG*WKTPTQETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVPKADLT 318
PT+ T PT T T TT T++ +P TTT+ T T +STT + T T
Sbjct: 139 PTVTTVRTSTTVPT--TTTVPTTTVPTTMSIPTTTTVPTTMT-VSTTTSVP-TTTSIPTT 194
Query: 319 SSLPLSLVLA 348
+S+P++ ++
Sbjct: 195 TSVPVTTTVS 204
>U50078-1|AAD12586.1| 4861|Homo sapiens p532 protein.
Length = 4861
Score = 30.7 bits (66), Expect = 7.6
Identities = 17/56 (30%), Positives = 28/56 (50%)
Frame = +1
Query: 175 PTQETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVPKADLTSSLPLSLV 342
P Q+ T + T+ S ++ +E T +T V T TVP ++ +PLSL+
Sbjct: 2626 PAQQAQTPVTTSPSASSTTSFMSSSLEDTTTATTPVTDTETVPASESPGVMPLSLL 2681
>U05040-1|AAA17976.2| 644|Homo sapiens FUSE binding protein
protein.
Length = 644
Score = 30.3 bits (65), Expect = 10.0
Identities = 15/46 (32%), Positives = 16/46 (34%)
Frame = +1
Query: 763 PPXPXAXGGXXXXXXQKTPPPPGRNXXFCXXXPXSPXPPQTXPXGP 900
PP P G PP PG P +P PP P GP
Sbjct: 456 PPVPHGPHGVPGPHGPPGPPGPGTPMGPYNPAPYNPGPPGPAPHGP 501
>BC099644-1|AAH99644.1| 639|Homo sapiens keratin 2 (epidermal
ichthyosis bullosa of Siemens) protein.
Length = 639
Score = 30.3 bits (65), Expect = 10.0
Identities = 16/34 (47%), Positives = 16/34 (47%)
Frame = -2
Query: 901 GXPGGGFGGGXXXGGXKXKXPRXAXGXGGFFGXR 800
G GGGFGGG GG G GGF G R
Sbjct: 90 GGRGGGFGGGSSFGGGSG-FSGGGFGGGGFGGGR 122
>BC099643-1|AAH99643.1| 639|Homo sapiens keratin 2 (epidermal
ichthyosis bullosa of Siemens) protein.
Length = 639
Score = 30.3 bits (65), Expect = 10.0
Identities = 16/34 (47%), Positives = 16/34 (47%)
Frame = -2
Query: 901 GXPGGGFGGGXXXGGXKXKXPRXAXGXGGFFGXR 800
G GGGFGGG GG G GGF G R
Sbjct: 90 GGRGGGFGGGSSFGGGSG-FSGGGFGGGGFGGGR 122
>BC096294-1|AAH96294.1| 639|Homo sapiens keratin 2 (epidermal
ichthyosis bullosa of Siemens) protein.
Length = 639
Score = 30.3 bits (65), Expect = 10.0
Identities = 16/34 (47%), Positives = 16/34 (47%)
Frame = -2
Query: 901 GXPGGGFGGGXXXGGXKXKXPRXAXGXGGFFGXR 800
G GGGFGGG GG G GGF G R
Sbjct: 90 GGRGGGFGGGSSFGGGSG-FSGGGFGGGGFGGGR 122
>BC017247-1|AAH17247.1| 653|Homo sapiens FUBP1 protein protein.
Length = 653
Score = 30.3 bits (65), Expect = 10.0
Identities = 15/46 (32%), Positives = 16/46 (34%)
Frame = +1
Query: 763 PPXPXAXGGXXXXXXQKTPPPPGRNXXFCXXXPXSPXPPQTXPXGP 900
PP P G PP PG P +P PP P GP
Sbjct: 455 PPVPHGPHGVPGPHGPPGPPGPGTPMGPYNPAPYNPGPPGPAPHGP 500
>AB209366-1|BAD92603.1| 493|Homo sapiens far upstream
element-binding protein variant protein.
Length = 493
Score = 30.3 bits (65), Expect = 10.0
Identities = 15/46 (32%), Positives = 16/46 (34%)
Frame = +1
Query: 763 PPXPXAXGGXXXXXXQKTPPPPGRNXXFCXXXPXSPXPPQTXPXGP 900
PP P G PP PG P +P PP P GP
Sbjct: 306 PPVPHGPHGVPGPHGPPGPPGPGTPMGPYNPAPYNPGPPGPAPHGP 351
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 109,972,532
Number of Sequences: 237096
Number of extensions: 2336662
Number of successful extensions: 14825
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 12167
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14161
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11659288620
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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