Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP11_F_E06
(859 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB208983-1|BAD92220.1| 674|Homo sapiens DEAD/H (Asp-Glu-Ala-Asp... 38 0.047
U50553-1|AAB95637.1| 662|Homo sapiens helicase like protein 2 p... 36 0.14
BC011819-1|AAH11819.1| 662|Homo sapiens DEAD (Asp-Glu-Ala-Asp) ... 36 0.14
AL391647-2|CAI41416.1| 662|Homo sapiens DEAD (Asp-Glu-Ala-Asp) ... 36 0.14
AF061337-1|AAC34298.1| 662|Homo sapiens DEAD box RNA helicase D... 36 0.14
AF000983-1|AAC51830.1| 662|Homo sapiens dead box, X isoform pro... 36 0.14
AF000982-1|AAC51829.1| 662|Homo sapiens dead box, X isoform pro... 36 0.14
BC034942-1|AAH34942.1| 660|Homo sapiens DDX3Y protein protein. 32 2.3
AF000985-1|AAC51832.1| 660|Homo sapiens dead box, Y isoform pro... 32 2.3
AF000984-1|AAC51831.1| 660|Homo sapiens dead box, Y isoform pro... 32 2.3
>AB208983-1|BAD92220.1| 674|Homo sapiens DEAD/H
(Asp-Glu-Ala-Asp/His) box polypeptide 3 variant protein.
Length = 674
Score = 37.9 bits (84), Expect = 0.047
Identities = 21/43 (48%), Positives = 25/43 (58%), Gaps = 6/43 (13%)
Frame = +3
Query: 168 SNMSNVTNQNGTGLEQQLAGLDLQPQ------APKSTGRYIPP 278
S MS+V +N GL+QQ AGLDL + S GRYIPP
Sbjct: 11 SGMSHVAVENALGLDQQFAGLDLNSSDNQSGGSTASKGRYIPP 53
>U50553-1|AAB95637.1| 662|Homo sapiens helicase like protein 2
protein.
Length = 662
Score = 36.3 bits (80), Expect = 0.14
Identities = 20/41 (48%), Positives = 24/41 (58%), Gaps = 6/41 (14%)
Frame = +3
Query: 174 MSNVTNQNGTGLEQQLAGLDLQPQ------APKSTGRYIPP 278
MS+V +N GL+QQ AGLDL + S GRYIPP
Sbjct: 1 MSHVAVENALGLDQQFAGLDLNSSDNQSGGSTASKGRYIPP 41
>BC011819-1|AAH11819.1| 662|Homo sapiens DEAD (Asp-Glu-Ala-Asp) box
polypeptide 3, X-linked protein.
Length = 662
Score = 36.3 bits (80), Expect = 0.14
Identities = 20/41 (48%), Positives = 24/41 (58%), Gaps = 6/41 (14%)
Frame = +3
Query: 174 MSNVTNQNGTGLEQQLAGLDLQPQ------APKSTGRYIPP 278
MS+V +N GL+QQ AGLDL + S GRYIPP
Sbjct: 1 MSHVAVENALGLDQQFAGLDLNSSDNQSGGSTASKGRYIPP 41
>AL391647-2|CAI41416.1| 662|Homo sapiens DEAD (Asp-Glu-Ala-Asp) box
polypeptide 3, X-linked protein.
Length = 662
Score = 36.3 bits (80), Expect = 0.14
Identities = 20/41 (48%), Positives = 24/41 (58%), Gaps = 6/41 (14%)
Frame = +3
Query: 174 MSNVTNQNGTGLEQQLAGLDLQPQ------APKSTGRYIPP 278
MS+V +N GL+QQ AGLDL + S GRYIPP
Sbjct: 1 MSHVAVENALGLDQQFAGLDLNSSDNQSGGSTASKGRYIPP 41
>AF061337-1|AAC34298.1| 662|Homo sapiens DEAD box RNA helicase DDX3
protein.
Length = 662
Score = 36.3 bits (80), Expect = 0.14
Identities = 20/41 (48%), Positives = 24/41 (58%), Gaps = 6/41 (14%)
Frame = +3
Query: 174 MSNVTNQNGTGLEQQLAGLDLQPQ------APKSTGRYIPP 278
MS+V +N GL+QQ AGLDL + S GRYIPP
Sbjct: 1 MSHVAVENALGLDQQFAGLDLNSSDNQSGGSTASKGRYIPP 41
>AF000983-1|AAC51830.1| 662|Homo sapiens dead box, X isoform
protein.
Length = 662
Score = 36.3 bits (80), Expect = 0.14
Identities = 20/41 (48%), Positives = 24/41 (58%), Gaps = 6/41 (14%)
Frame = +3
Query: 174 MSNVTNQNGTGLEQQLAGLDLQPQ------APKSTGRYIPP 278
MS+V +N GL+QQ AGLDL + S GRYIPP
Sbjct: 1 MSHVAVENALGLDQQFAGLDLNSSDNQSGGSTASKGRYIPP 41
>AF000982-1|AAC51829.1| 662|Homo sapiens dead box, X isoform
protein.
Length = 662
Score = 36.3 bits (80), Expect = 0.14
Identities = 20/41 (48%), Positives = 24/41 (58%), Gaps = 6/41 (14%)
Frame = +3
Query: 174 MSNVTNQNGTGLEQQLAGLDLQPQ------APKSTGRYIPP 278
MS+V +N GL+QQ AGLDL + S GRYIPP
Sbjct: 1 MSHVAVENALGLDQQFAGLDLNSSDNQSGGSTASKGRYIPP 41
>BC034942-1|AAH34942.1| 660|Homo sapiens DDX3Y protein protein.
Length = 660
Score = 32.3 bits (70), Expect = 2.3
Identities = 19/41 (46%), Positives = 24/41 (58%), Gaps = 6/41 (14%)
Frame = +3
Query: 174 MSNVTNQNGTGLEQQLAGLDLQPQ------APKSTGRYIPP 278
MS+V +N L+QQLA LDL + + S GRYIPP
Sbjct: 1 MSHVVVKNDPELDQQLANLDLNSEKQSGGASTASKGRYIPP 41
>AF000985-1|AAC51832.1| 660|Homo sapiens dead box, Y isoform
protein.
Length = 660
Score = 32.3 bits (70), Expect = 2.3
Identities = 19/41 (46%), Positives = 24/41 (58%), Gaps = 6/41 (14%)
Frame = +3
Query: 174 MSNVTNQNGTGLEQQLAGLDLQPQ------APKSTGRYIPP 278
MS+V +N L+QQLA LDL + + S GRYIPP
Sbjct: 1 MSHVVVKNDPELDQQLANLDLNSEKQSGGASTASKGRYIPP 41
>AF000984-1|AAC51831.1| 660|Homo sapiens dead box, Y isoform
protein.
Length = 660
Score = 32.3 bits (70), Expect = 2.3
Identities = 19/41 (46%), Positives = 24/41 (58%), Gaps = 6/41 (14%)
Frame = +3
Query: 174 MSNVTNQNGTGLEQQLAGLDLQPQ------APKSTGRYIPP 278
MS+V +N L+QQLA LDL + + S GRYIPP
Sbjct: 1 MSHVVVKNDPELDQQLANLDLNSEKQSGGASTASKGRYIPP 41
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 107,009,933
Number of Sequences: 237096
Number of extensions: 2033186
Number of successful extensions: 5289
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 5067
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5289
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10928473528
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -