Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP11_F_E06
         (859 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY089613-1|AAL90351.1|  798|Drosophila melanogaster RE28061p pro...    43   5e-04
AE014297-778|AAF54262.1|  798|Drosophila melanogaster CG9748-PA ...    43   5e-04
AY119220-1|AAM51080.1|  104|Drosophila melanogaster SD16627p pro...    32   0.88 

>AY089613-1|AAL90351.1|  798|Drosophila melanogaster RE28061p
           protein.
          Length = 798

 Score = 43.2 bits (97), Expect = 5e-04
 Identities = 22/45 (48%), Positives = 27/45 (60%)
 Frame = +3

Query: 174 MSNVTNQNGTGLEQQLAGLDLQPQAPKSTGRYIPPXSA*AVAGNL 308
           MSN  NQNGTGLEQQ+AGLDL   +   +G      S  +V G +
Sbjct: 1   MSNAINQNGTGLEQQVAGLDLNGGSADYSGPITSKTSTNSVTGGV 45



 Score = 29.9 bits (64), Expect = 4.7
 Identities = 11/30 (36%), Positives = 18/30 (60%)
 Frame = +2

Query: 572 NGTDAGLATCDVRRIMNHRAPRNDRWKEPE 661
           +G++    T +  +    + PRNDRW+EPE
Sbjct: 177 SGSNLNEQTAEDGQAQQQQQPRNDRWQEPE 206


>AE014297-778|AAF54262.1|  798|Drosophila melanogaster CG9748-PA
           protein.
          Length = 798

 Score = 43.2 bits (97), Expect = 5e-04
 Identities = 22/45 (48%), Positives = 27/45 (60%)
 Frame = +3

Query: 174 MSNVTNQNGTGLEQQLAGLDLQPQAPKSTGRYIPPXSA*AVAGNL 308
           MSN  NQNGTGLEQQ+AGLDL   +   +G      S  +V G +
Sbjct: 1   MSNAINQNGTGLEQQVAGLDLNGGSADYSGPITSKTSTNSVTGGV 45



 Score = 29.9 bits (64), Expect = 4.7
 Identities = 11/30 (36%), Positives = 18/30 (60%)
 Frame = +2

Query: 572 NGTDAGLATCDVRRIMNHRAPRNDRWKEPE 661
           +G++    T +  +    + PRNDRW+EPE
Sbjct: 177 SGSNLNEQTAEDGQAQQQQQPRNDRWQEPE 206


>AY119220-1|AAM51080.1|  104|Drosophila melanogaster SD16627p
           protein.
          Length = 104

 Score = 32.3 bits (70), Expect = 0.88
 Identities = 15/42 (35%), Positives = 21/42 (50%)
 Frame = +2

Query: 614 IMNHRAPRNDRWKEPEPRAEERSNSRWPSDRCAPNXISPKTR 739
           +++HR  R + W  P  +      S WP DR AP  +SP  R
Sbjct: 41  VLDHRMRRPEAWISPSLQP----CSWWPGDRAAPRDVSPSCR 78


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,544,541
Number of Sequences: 53049
Number of extensions: 623513
Number of successful extensions: 1948
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1858
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1948
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4126982652
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)