Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP11_F_E03
(868 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC83.18c |||C2 domain protein|Schizosaccharomyces pombe|chr 2|... 36 0.010
SPCC1393.08 |||transcription factor, zf-GATA type |Schizosacchar... 31 0.21
SPCC830.05c |epl1||histone acetyltransferase complex subunit Epl... 28 1.5
SPAC2F3.14c |||conserved fungal protein|Schizosaccharomyces pomb... 28 2.0
SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual 27 2.6
SPBC6B1.02 |ppk30||Ark1/Prk1 family protein kinase Ppk30|Schizos... 27 2.6
SPBC14F5.12c |cbh2||centromere binding protein Cbh2|Schizosaccha... 27 3.5
SPBP16F5.08c |||flavin dependent monooxygenase |Schizosaccharomy... 27 3.5
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 27 4.6
SPCC1393.07c |mug4||sequence orphan|Schizosaccharomyces pombe|ch... 26 6.0
SPCC330.05c |ura4||orotidine 5'-phosphate decarboxylase Ura4 |Sc... 26 8.0
SPCC1742.01 ||SPCC1795.13, SPCPB16A4.07c|sequence orphan|Schizos... 26 8.0
SPBC947.11c |elg1||DNA replication factor C complex subunit Elg1... 26 8.0
>SPBC83.18c |||C2 domain protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 272
Score = 35.5 bits (78), Expect = 0.010
Identities = 28/82 (34%), Positives = 35/82 (42%), Gaps = 2/82 (2%)
Frame = +1
Query: 385 VTTLTPVPSKPVHPTLPPNQIKPV--PVYPTPATRPITTPGPGSVQQLVTFYNSXAKGSV 558
V LTPVP KP P+ P ++ PV P+ PTP +R P L T Y S
Sbjct: 149 VAALTPVPKKPSKPSKPRKKV-PVSHPLPPTPPSREEHVSVPRE-SSLFT-YEDDPLPSF 205
Query: 559 IRPYXYSDAVKQG*TFNXNIKD 624
PY D Q + N+ D
Sbjct: 206 PSPYMVDDYYTQDVFVSDNVND 227
>SPCC1393.08 |||transcription factor, zf-GATA type
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 557
Score = 31.1 bits (67), Expect = 0.21
Identities = 18/46 (39%), Positives = 22/46 (47%)
Frame = +1
Query: 409 SKPVHPTLPPNQIKPVPVYPTPATRPITTPGPGSVQQLVTFYNSXA 546
SK PT PP P PTP++ I TP PG++ F S A
Sbjct: 153 SKTSEPT-PPFSYVQTPCIPTPSSALIDTPFPGALDSEFGFDESQA 197
>SPCC830.05c |epl1||histone acetyltransferase complex subunit Epl1
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 557
Score = 28.3 bits (60), Expect = 1.5
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = +1
Query: 418 VHPTLPPNQIKPVPVYPTPATRPITTPGPGS 510
++P P ++KP PTPA T+P P S
Sbjct: 314 INPKRRPIEVKPAAPVPTPAPPVKTSPHPAS 344
>SPAC2F3.14c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 331
Score = 27.9 bits (59), Expect = 2.0
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = +1
Query: 400 PVPSKPVHPTLPPNQIKPVPVYPTPATRPI 489
PVP +P+ P PP +PVP P P P+
Sbjct: 113 PVPEEPL-PGEPPLPDEPVPEEPLPGEPPL 141
>SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual
Length = 4717
Score = 27.5 bits (58), Expect = 2.6
Identities = 11/33 (33%), Positives = 18/33 (54%)
Frame = +3
Query: 405 TFEAGSSNSTTQPD*ACPCVPYSSDAAHHHSRT 503
TFE ++N D + C Y++ A+HH S +
Sbjct: 4576 TFEQSNTNVLALADASMKCFNYANTASHHRSNS 4608
>SPBC6B1.02 |ppk30||Ark1/Prk1 family protein kinase
Ppk30|Schizosaccharomyces pombe|chr 2|||Manual
Length = 953
Score = 27.5 bits (58), Expect = 2.6
Identities = 14/47 (29%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Frame = +1
Query: 391 TLTPVPSKPVHPTLPP-NQIKPVPVYPTPATRPITTPGPGSVQQLVT 528
+LTP+ S+P H +LPP ++ P RP SV +++
Sbjct: 360 SLTPLSSRPAHTSLPPIPTVQTTSSNVPPVNRPSLKSKSPSVSNILS 406
>SPBC14F5.12c |cbh2||centromere binding protein
Cbh2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 514
Score = 27.1 bits (57), Expect = 3.5
Identities = 12/34 (35%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Frame = -2
Query: 411 RRYRR*SCH-DRFDLSWRYGCRSRLDNRRLCEWL 313
R +R+ + H D D WRY +R+ + EWL
Sbjct: 236 RAFRQANAHPDSMDFHWRYNGTARMTTSIMEEWL 269
>SPBP16F5.08c |||flavin dependent monooxygenase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 447
Score = 27.1 bits (57), Expect = 3.5
Identities = 15/36 (41%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Frame = +1
Query: 400 PVPS-KPVHPTLPPNQIKPVPVYPTPATRPITTPGP 504
PVPS P+ T P +PVYP+P R + T P
Sbjct: 58 PVPSTNPILTTEPIVGPAALPVYPSPLYRDLQTNTP 93
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 26.6 bits (56), Expect = 4.6
Identities = 12/36 (33%), Positives = 15/36 (41%)
Frame = +1
Query: 400 PVPSKPVHPTLPPNQIKPVPVYPTPATRPITTPGPG 507
PVP P +P + PV P P+ TP G
Sbjct: 1190 PVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAG 1225
>SPCC1393.07c |mug4||sequence orphan|Schizosaccharomyces pombe|chr
3|||Manual
Length = 845
Score = 26.2 bits (55), Expect = 6.0
Identities = 11/39 (28%), Positives = 20/39 (51%)
Frame = +1
Query: 451 PVPVYPTPATRPITTPGPGSVQQLVTFYNSXAKGSVIRP 567
P+PV TP P+T + L+ + N +K ++ +P
Sbjct: 632 PIPVLNTPILTPVTINIQSTTYYLIGYANQNSKKTLDQP 670
>SPCC330.05c |ura4||orotidine 5'-phosphate decarboxylase Ura4
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 264
Score = 25.8 bits (54), Expect = 8.0
Identities = 13/31 (41%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
Frame = -3
Query: 527 VTSCCTLPGPGVVMGRVAGVGY-TGTGLIWL 438
+T+C T+PG G++ G + VG G GL+ L
Sbjct: 120 ITNCHTVPGEGIIQG-LKEVGLPLGRGLLLL 149
>SPCC1742.01 ||SPCC1795.13, SPCPB16A4.07c|sequence
orphan|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1563
Score = 25.8 bits (54), Expect = 8.0
Identities = 20/58 (34%), Positives = 25/58 (43%)
Frame = +1
Query: 388 TTLTPVPSKPVHPTLPPNQIKPVPVYPTPATRPITTPGPGSVQQLVTFYNSXAKGSVI 561
TTLT + T P P YPT T T PGSV +T + + G+VI
Sbjct: 252 TTLTTTVPHSGNETGPTTVYVETP-YPTTVTTTTTVGYPGSVTTTLT--GAPSNGTVI 306
Score = 25.8 bits (54), Expect = 8.0
Identities = 20/58 (34%), Positives = 25/58 (43%)
Frame = +1
Query: 388 TTLTPVPSKPVHPTLPPNQIKPVPVYPTPATRPITTPGPGSVQQLVTFYNSXAKGSVI 561
TTLT + T P P YPT T T PGSV +T + + G+VI
Sbjct: 330 TTLTTTVPHSGNETGPTTVYVETP-YPTTVTTTTTVGYPGSVTTTLT--GAPSNGTVI 384
Score = 25.8 bits (54), Expect = 8.0
Identities = 20/58 (34%), Positives = 25/58 (43%)
Frame = +1
Query: 388 TTLTPVPSKPVHPTLPPNQIKPVPVYPTPATRPITTPGPGSVQQLVTFYNSXAKGSVI 561
TTLT + T P P YPT T T PGSV +T + + G+VI
Sbjct: 408 TTLTTTVPHSGNETGPTTVYVETP-YPTTVTTTTTVGYPGSVTTTLT--GAPSNGTVI 462
Score = 25.8 bits (54), Expect = 8.0
Identities = 20/58 (34%), Positives = 25/58 (43%)
Frame = +1
Query: 388 TTLTPVPSKPVHPTLPPNQIKPVPVYPTPATRPITTPGPGSVQQLVTFYNSXAKGSVI 561
TTLT + T P P YPT T T PGSV +T + + G+VI
Sbjct: 486 TTLTTTVPHSGNETGPTTVYVETP-YPTTVTTTTTVGYPGSVTTTLT--GAPSNGTVI 540
Score = 25.8 bits (54), Expect = 8.0
Identities = 20/58 (34%), Positives = 25/58 (43%)
Frame = +1
Query: 388 TTLTPVPSKPVHPTLPPNQIKPVPVYPTPATRPITTPGPGSVQQLVTFYNSXAKGSVI 561
TTLT + T P P YPT T T PGSV +T + + G+VI
Sbjct: 564 TTLTTTVPHSGNETGPTTVYVETP-YPTTVTTTTTVGYPGSVTTTLT--GAPSNGTVI 618
>SPBC947.11c |elg1||DNA replication factor C complex subunit
Elg1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 920
Score = 25.8 bits (54), Expect = 8.0
Identities = 9/21 (42%), Positives = 14/21 (66%)
Frame = +1
Query: 232 KPIDKNANIDFINMEAGGARP 294
K + KN+ I F++ E GG +P
Sbjct: 182 KSVKKNSEIKFVSEERGGTKP 202
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,034,051
Number of Sequences: 5004
Number of extensions: 55730
Number of successful extensions: 200
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 173
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 196
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 432473040
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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