Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP11_F_E02
(850 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81453-8|CAB03798.1| 299|Caenorhabditis elegans Hypothetical pr... 116 3e-26
AL031630-23|CAA21003.1| 299|Caenorhabditis elegans Hypothetical... 116 3e-26
Z70311-11|CAA94380.1| 484|Caenorhabditis elegans Hypothetical p... 44 1e-04
Z70306-6|CAA94326.1| 484|Caenorhabditis elegans Hypothetical pr... 44 1e-04
Z83219-1|CAB05694.1| 322|Caenorhabditis elegans Hypothetical pr... 33 0.34
Z22178-1|CAA80153.1| 298|Caenorhabditis elegans Hypothetical pr... 32 0.59
Z99281-40|CAB16512.1| 268|Caenorhabditis elegans Hypothetical p... 31 1.4
Z81463-4|CAB03852.2| 3118|Caenorhabditis elegans Hypothetical pr... 30 2.4
Z99772-2|CAB16922.2| 2162|Caenorhabditis elegans Hypothetical pr... 29 4.2
Z75533-11|CAA99823.2| 2162|Caenorhabditis elegans Hypothetical p... 29 4.2
U41275-3|AAA82466.1| 612|Caenorhabditis elegans Hypothetical pr... 29 4.2
U39647-1|AAA80375.2| 351|Caenorhabditis elegans Hypothetical pr... 29 5.5
AC087079-14|AAM81101.1| 392|Caenorhabditis elegans Nuclear pore... 28 7.3
AC087079-13|AAK27866.1| 787|Caenorhabditis elegans Nuclear pore... 28 7.3
Z81097-15|CAB03172.1| 412|Caenorhabditis elegans Hypothetical p... 28 9.6
Z68748-12|CAN86588.1| 792|Caenorhabditis elegans Hypothetical p... 28 9.6
Z68748-10|CAL36500.1| 789|Caenorhabditis elegans Hypothetical p... 28 9.6
Z68748-9|CAL36499.1| 796|Caenorhabditis elegans Hypothetical pr... 28 9.6
U80448-8|AAB37821.3| 1014|Caenorhabditis elegans Hypothetical pr... 28 9.6
>Z81453-8|CAB03798.1| 299|Caenorhabditis elegans Hypothetical
protein B0250.5 protein.
Length = 299
Score = 116 bits (278), Expect = 3e-26
Identities = 68/183 (37%), Positives = 96/183 (52%), Gaps = 1/183 (0%)
Frame = +1
Query: 193 FLGLGNMGGFMAANLVKKGFTVRGYDPSKDALNAAAKNGVTPANSIXXXXXXXXXXXSIL 372
F+GLGNMGG MA NL+K G + YD +K + G A ++L
Sbjct: 6 FIGLGNMGGHMARNLIKNGKKLIVYDVNKAVVQEFKAEGCEVAAHPADIAAASKEIITVL 65
Query: 373 TSNKVVLDVYLGKDGVVAHAKKGSLLIDSSTIDPNVPKQIFPIALEKGLGFTDAPVSGGV 552
S+ V VY G+ G+ + G+L +DSSTID V ++ A + DAP+SGGV
Sbjct: 66 PSSPHVKAVYQGEAGIFKTIQPGTLCMDSSTIDQIVSLEVAQAAALLKAEYIDAPISGGV 125
Query: 553 MGAXNATLAFMAG-GRKEDFERSLPLLXVMGAKQFHCGQIGSGXVAKLTNNXLMGXPRLA 729
GA ATL FM G G F+R+ +L +MG + G +G+G AK+ NN L+G +A
Sbjct: 126 TGAQQATLTFMVGAGNDATFKRAEAVLSLMGKNIVNLGAVGNGTAAKICNNMLLGIQMVA 185
Query: 730 XAD 738
A+
Sbjct: 186 VAE 188
>AL031630-23|CAA21003.1| 299|Caenorhabditis elegans Hypothetical
protein B0250.5 protein.
Length = 299
Score = 116 bits (278), Expect = 3e-26
Identities = 68/183 (37%), Positives = 96/183 (52%), Gaps = 1/183 (0%)
Frame = +1
Query: 193 FLGLGNMGGFMAANLVKKGFTVRGYDPSKDALNAAAKNGVTPANSIXXXXXXXXXXXSIL 372
F+GLGNMGG MA NL+K G + YD +K + G A ++L
Sbjct: 6 FIGLGNMGGHMARNLIKNGKKLIVYDVNKAVVQEFKAEGCEVAAHPADIAAASKEIITVL 65
Query: 373 TSNKVVLDVYLGKDGVVAHAKKGSLLIDSSTIDPNVPKQIFPIALEKGLGFTDAPVSGGV 552
S+ V VY G+ G+ + G+L +DSSTID V ++ A + DAP+SGGV
Sbjct: 66 PSSPHVKAVYQGEAGIFKTIQPGTLCMDSSTIDQIVSLEVAQAAALLKAEYIDAPISGGV 125
Query: 553 MGAXNATLAFMAG-GRKEDFERSLPLLXVMGAKQFHCGQIGSGXVAKLTNNXLMGXPRLA 729
GA ATL FM G G F+R+ +L +MG + G +G+G AK+ NN L+G +A
Sbjct: 126 TGAQQATLTFMVGAGNDATFKRAEAVLSLMGKNIVNLGAVGNGTAAKICNNMLLGIQMVA 185
Query: 730 XAD 738
A+
Sbjct: 186 VAE 188
>Z70311-11|CAA94380.1| 484|Caenorhabditis elegans Hypothetical
protein T25B9.9 protein.
Length = 484
Score = 44.4 bits (100), Expect = 1e-04
Identities = 46/188 (24%), Positives = 76/188 (40%), Gaps = 11/188 (5%)
Frame = +1
Query: 178 DKNVAFLGLGNMGGFMAANLVKKGFTVRGYDPS----KDAL-NAAAKNGVTPANSIXXXX 342
+ ++A +GL MG + N+ GFTV ++ + D L N A + A+SI
Sbjct: 3 EADIAVIGLAVMGQNLILNMNDHGFTVCAFNRTVKLVDDFLANEAKGTKIIGAHSIEEMC 62
Query: 343 XXXXXXXSILTSNKVVLDVYLGKDGVVAHAKKGSLLIDSSTIDPNVPKQIFPIALEKGLG 522
++ K V + D +V H ++G ++ID + + KG+
Sbjct: 63 KKLKRPRRVMMLIKAGTPVDMMIDAIVPHLEEGDIIIDGGNSEYTDSNRRSEQLAAKGIM 122
Query: 523 FTDAPVSGGVMGAXNATLAFMAGGRKEDFERSLPLLXVMGAKQ--FHC----GQIGSGXV 684
F VSGG GA + M GG + + + + AK C G GSG
Sbjct: 123 FVGCGVSGGEEGARFGP-SLMPGGNPKAWPHLKDIFQKIAAKSNGEPCCDWVGNAGSGHF 181
Query: 685 AKLTNNXL 708
K+ +N +
Sbjct: 182 VKMVHNGI 189
>Z70306-6|CAA94326.1| 484|Caenorhabditis elegans Hypothetical
protein T25B9.9 protein.
Length = 484
Score = 44.4 bits (100), Expect = 1e-04
Identities = 46/188 (24%), Positives = 76/188 (40%), Gaps = 11/188 (5%)
Frame = +1
Query: 178 DKNVAFLGLGNMGGFMAANLVKKGFTVRGYDPS----KDAL-NAAAKNGVTPANSIXXXX 342
+ ++A +GL MG + N+ GFTV ++ + D L N A + A+SI
Sbjct: 3 EADIAVIGLAVMGQNLILNMNDHGFTVCAFNRTVKLVDDFLANEAKGTKIIGAHSIEEMC 62
Query: 343 XXXXXXXSILTSNKVVLDVYLGKDGVVAHAKKGSLLIDSSTIDPNVPKQIFPIALEKGLG 522
++ K V + D +V H ++G ++ID + + KG+
Sbjct: 63 KKLKRPRRVMMLIKAGTPVDMMIDAIVPHLEEGDIIIDGGNSEYTDSNRRSEQLAAKGIM 122
Query: 523 FTDAPVSGGVMGAXNATLAFMAGGRKEDFERSLPLLXVMGAKQ--FHC----GQIGSGXV 684
F VSGG GA + M GG + + + + AK C G GSG
Sbjct: 123 FVGCGVSGGEEGARFGP-SLMPGGNPKAWPHLKDIFQKIAAKSNGEPCCDWVGNAGSGHF 181
Query: 685 AKLTNNXL 708
K+ +N +
Sbjct: 182 VKMVHNGI 189
>Z83219-1|CAB05694.1| 322|Caenorhabditis elegans Hypothetical
protein C31C9.2 protein.
Length = 322
Score = 32.7 bits (71), Expect = 0.34
Identities = 17/42 (40%), Positives = 22/42 (52%)
Frame = +1
Query: 181 KNVAFLGLGNMGGFMAANLVKKGFTVRGYDPSKDALNAAAKN 306
+ +A LGLG +G +A L G V G+DP A AKN
Sbjct: 146 RTLAVLGLGRIGSEVAVRLQAFGMKVIGFDPMVTKEQAEAKN 187
>Z22178-1|CAA80153.1| 298|Caenorhabditis elegans Hypothetical
protein F54C8.1 protein.
Length = 298
Score = 31.9 bits (69), Expect = 0.59
Identities = 17/41 (41%), Positives = 22/41 (53%)
Frame = +1
Query: 181 KNVAFLGLGNMGGFMAANLVKKGFTVRGYDPSKDALNAAAK 303
+NVA +G G MG +A GF V D +K AL+ A K
Sbjct: 12 RNVAIVGSGQMGSGIAQVTASSGFNVMLADVNKKALDRAMK 52
>Z99281-40|CAB16512.1| 268|Caenorhabditis elegans Hypothetical
protein Y57G11C.11a protein.
Length = 268
Score = 30.7 bits (66), Expect = 1.4
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = +1
Query: 202 LGNMGGFMAANLVKKGFTVRGYDPSKDALNAA 297
+G+ GG ++ L + GF V G D +K A+ AA
Sbjct: 82 VGSGGGLLSIPLARSGFDVTGIDATKQAVEAA 113
>Z81463-4|CAB03852.2| 3118|Caenorhabditis elegans Hypothetical protein
C06B8.7 protein.
Length = 3118
Score = 29.9 bits (64), Expect = 2.4
Identities = 14/44 (31%), Positives = 24/44 (54%)
Frame = -1
Query: 514 LSLRL*GRSVWEHSDLSYSNRSEAILFSHEPQRHLCPGTRRARL 383
LS R +W ++++ SEA+++ H PQ + PGT A +
Sbjct: 1453 LSNRWNNEKIWLQK-VNFTRNSEAVMWLHSPQHAVVPGTPIAEI 1495
>Z99772-2|CAB16922.2| 2162|Caenorhabditis elegans Hypothetical protein
H05L14.2 protein.
Length = 2162
Score = 29.1 bits (62), Expect = 4.2
Identities = 16/42 (38%), Positives = 21/42 (50%)
Frame = -3
Query: 668 ICPQWNCLAPITXRRGRDLSKSSLRPPAMKARVAFXAPMTPP 543
+C Q + P T RR +D S S PA ++ AF P PP
Sbjct: 924 VCGQRRKVTPFTPRRKQD-SSSGDEQPASESTSAFDIPEHPP 964
>Z75533-11|CAA99823.2| 2162|Caenorhabditis elegans Hypothetical
protein H05L14.2 protein.
Length = 2162
Score = 29.1 bits (62), Expect = 4.2
Identities = 16/42 (38%), Positives = 21/42 (50%)
Frame = -3
Query: 668 ICPQWNCLAPITXRRGRDLSKSSLRPPAMKARVAFXAPMTPP 543
+C Q + P T RR +D S S PA ++ AF P PP
Sbjct: 924 VCGQRRKVTPFTPRRKQD-SSSGDEQPASESTSAFDIPEHPP 964
>U41275-3|AAA82466.1| 612|Caenorhabditis elegans Hypothetical
protein T25D1.1 protein.
Length = 612
Score = 29.1 bits (62), Expect = 4.2
Identities = 14/31 (45%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
Frame = +2
Query: 131 LSVCTQPPDGRIVLTPTRMWLSSAS-ETWED 220
+ VC PP TPTR+ L SAS + W+D
Sbjct: 544 ICVCNLPPRCLRTCTPTRLQLPSASNDVWDD 574
>U39647-1|AAA80375.2| 351|Caenorhabditis elegans Hypothetical
protein C44E12.1 protein.
Length = 351
Score = 28.7 bits (61), Expect = 5.5
Identities = 18/54 (33%), Positives = 25/54 (46%)
Frame = +1
Query: 559 AXNATLAFMAGGRKEDFERSLPLLXVMGAKQFHCGQIGSGXVAKLTNNXLMGXP 720
A T A + ED R+L LL V+G + H G I + + L L+G P
Sbjct: 106 AAMVTAATIISKTDEDVARALGLLFVVGEEFDHIGMIEANKLEILPEYLLVGEP 159
>AC087079-14|AAM81101.1| 392|Caenorhabditis elegans Nuclear pore
complex protein protein13, isoform b protein.
Length = 392
Score = 28.3 bits (60), Expect = 7.3
Identities = 19/64 (29%), Positives = 27/64 (42%), Gaps = 2/64 (3%)
Frame = +1
Query: 544 GGVMGAXNATLAFMAGGRKEDFERSLPLLXVMGAKQ--FHCGQIGSGXVAKLTNNXLMGX 717
GG+ G AF+ G +E F+ + M Q +HC + G A T N L
Sbjct: 265 GGIPGTRGLVNAFLKVGTEESFQPEDDSIDGMPTWQVTYHCVRAGDMKSASETLNRLKSF 324
Query: 718 PRLA 729
P+ A
Sbjct: 325 PQCA 328
>AC087079-13|AAK27866.1| 787|Caenorhabditis elegans Nuclear pore
complex protein protein13, isoform a protein.
Length = 787
Score = 28.3 bits (60), Expect = 7.3
Identities = 19/64 (29%), Positives = 27/64 (42%), Gaps = 2/64 (3%)
Frame = +1
Query: 544 GGVMGAXNATLAFMAGGRKEDFERSLPLLXVMGAKQ--FHCGQIGSGXVAKLTNNXLMGX 717
GG+ G AF+ G +E F+ + M Q +HC + G A T N L
Sbjct: 265 GGIPGTRGLVNAFLKVGTEESFQPEDDSIDGMPTWQVTYHCVRAGDMKSASETLNRLKSF 324
Query: 718 PRLA 729
P+ A
Sbjct: 325 PQCA 328
>Z81097-15|CAB03172.1| 412|Caenorhabditis elegans Hypothetical
protein K07A1.11 protein.
Length = 412
Score = 27.9 bits (59), Expect = 9.6
Identities = 23/97 (23%), Positives = 38/97 (39%)
Frame = -2
Query: 648 FSSHHXEERKGPFEVFFTTSGHEGQGSVXSTHDSSRYRCICESQPFL*GYREDLFGNIRI 469
++ H E + F GHEG+G S ++ + + + D+ N I
Sbjct: 149 YTKHPSEPKDTKFRPQLRLKGHEGEGYGMSWSNTREGHLLTAGDDGMICHW-DINANQTI 207
Query: 468 YRTRIDQKRSFFRMSHNAIFAQVHVEHDFIAGQYGND 358
+ Q + F S NA H H+F+ G G+D
Sbjct: 208 SGQIVPQSK-FKGHSSNAEDVSFHALHNFVFGSVGDD 243
>Z68748-12|CAN86588.1| 792|Caenorhabditis elegans Hypothetical
protein F13H10.4c protein.
Length = 792
Score = 27.9 bits (59), Expect = 9.6
Identities = 10/33 (30%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Frame = -1
Query: 349 LHQRLQQW-SWLASLRSWPLRSVHLWKDRSREL 254
L+ RL++W W+ +S P R+ + W+ R+ +
Sbjct: 484 LYPRLEKWFHWIRITQSGPTRTTYRWRGRNETI 516
>Z68748-10|CAL36500.1| 789|Caenorhabditis elegans Hypothetical
protein F13H10.4b protein.
Length = 789
Score = 27.9 bits (59), Expect = 9.6
Identities = 10/33 (30%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Frame = -1
Query: 349 LHQRLQQW-SWLASLRSWPLRSVHLWKDRSREL 254
L+ RL++W W+ +S P R+ + W+ R+ +
Sbjct: 481 LYPRLEKWFHWIRITQSGPTRTTYRWRGRNETI 513
>Z68748-9|CAL36499.1| 796|Caenorhabditis elegans Hypothetical
protein F13H10.4a protein.
Length = 796
Score = 27.9 bits (59), Expect = 9.6
Identities = 10/33 (30%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Frame = -1
Query: 349 LHQRLQQW-SWLASLRSWPLRSVHLWKDRSREL 254
L+ RL++W W+ +S P R+ + W+ R+ +
Sbjct: 488 LYPRLEKWFHWIRITQSGPTRTTYRWRGRNETI 520
>U80448-8|AAB37821.3| 1014|Caenorhabditis elegans Hypothetical
protein F59A3.1 protein.
Length = 1014
Score = 27.9 bits (59), Expect = 9.6
Identities = 20/66 (30%), Positives = 30/66 (45%), Gaps = 2/66 (3%)
Frame = -2
Query: 501 YREDLFGNIRIYRTRIDQKRSFFRMSHNAIFAQVHVEHDFIAGQYG--NDHVDSINGCSN 328
Y + + G IY D K F +S+ +A+ H + + G D + ING +N
Sbjct: 261 YDDSVTGQDGIYTASADDKL-FVELSYR--YARAHTKMWKTGRRCGLSADGDNFINGITN 317
Query: 327 GVGWRH 310
G GW H
Sbjct: 318 GAGWYH 323
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,300,913
Number of Sequences: 27780
Number of extensions: 398316
Number of successful extensions: 1110
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1062
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1105
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2108493618
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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