Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP11_F_D24
(926 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 31 0.23
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 28 2.1
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 28 2.1
SPCC290.04 |ams2|SPCC4F11.01|cell cycle regulated GATA-type tran... 28 2.1
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 27 2.8
SPBC2A9.04c |||sir antagonist ortholog |Schizosaccharomyces pomb... 27 2.8
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 27 2.8
SPBC1921.06c |pvg3|mug49|beta-1,3-galactosyltransferase |Schizos... 27 2.8
SPAC19B12.03 |bgs3||1,3-beta-glucan synthase subunit Bgs3|Schizo... 27 3.8
SPAC3A11.08 |pcu4|cul4, Cul-4|cullin 4|Schizosaccharomyces pombe... 26 6.6
SPBC17D1.07c |||GTPase regulator |Schizosaccharomyces pombe|chr ... 26 6.6
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 26 8.7
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 31.1 bits (67), Expect = 0.23
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = +1
Query: 865 PXPPPTPXXPXPPPPPXLP 921
P PPP P PPPPP P
Sbjct: 750 PVPPPAPIMGGPPPPPPPP 768
Score = 29.9 bits (64), Expect = 0.53
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = +1
Query: 865 PXPPPTPXXPXPPPPPXLPP 924
P PPP PPPPP PP
Sbjct: 764 PPPPPGVAGAGPPPPPPPPP 783
Score = 25.8 bits (54), Expect = 8.7
Identities = 11/23 (47%), Positives = 12/23 (52%), Gaps = 1/23 (4%)
Frame = +1
Query: 859 SXPXPPPTPXXPXPPPPP-XLPP 924
S P PPP P P P P +PP
Sbjct: 731 SPPPPPPAVIVPTPAPAPIPVPP 753
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 27.9 bits (59), Expect = 2.1
Identities = 11/16 (68%), Positives = 11/16 (68%)
Frame = +1
Query: 877 PTPXXPXPPPPPXLPP 924
P P P PPPPP LPP
Sbjct: 234 PLPAPP-PPPPPTLPP 248
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 27.9 bits (59), Expect = 2.1
Identities = 10/20 (50%), Positives = 11/20 (55%)
Frame = +1
Query: 865 PXPPPTPXXPXPPPPPXLPP 924
P PPP+ P P P LPP
Sbjct: 1209 PVPPPSTAPPVPTPSAGLPP 1228
Score = 26.2 bits (55), Expect = 6.6
Identities = 9/20 (45%), Positives = 11/20 (55%)
Frame = +1
Query: 865 PXPPPTPXXPXPPPPPXLPP 924
P PPP+ P P P +PP
Sbjct: 1190 PVPPPSEAPPVPKPSVGVPP 1209
>SPCC290.04 |ams2|SPCC4F11.01|cell cycle regulated GATA-type
transcription factor Ams2|Schizosaccharomyces pombe|chr
3|||Manual
Length = 697
Score = 27.9 bits (59), Expect = 2.1
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = -2
Query: 196 CSSSRSSDRVF*CFLGHRPDPSSLQKQQQKRS 101
C S + +D + C+ P P++LQKQQQ S
Sbjct: 571 CDSEKENDDLE-CYFRTPPKPTTLQKQQQSPS 601
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 27.5 bits (58), Expect = 2.8
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = +1
Query: 865 PXPPPTPXXPXPPPPPXLP 921
P PP P P PPP LP
Sbjct: 1718 PSAPPMPAGPPSAPPPPLP 1736
Score = 25.8 bits (54), Expect = 8.7
Identities = 16/53 (30%), Positives = 16/53 (30%), Gaps = 8/53 (15%)
Frame = +1
Query: 790 GXXPXHXXXXXAXXXXXXXXXXXSXPXPPPTPXXPXPPP--------PPXLPP 924
G P H S P PPP P PPP PP PP
Sbjct: 1680 GMAPAHPVSTPPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPP 1732
>SPBC2A9.04c |||sir antagonist ortholog |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 741
Score = 27.5 bits (58), Expect = 2.8
Identities = 11/43 (25%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Frame = +1
Query: 127 ENLDPADDPKNIKRPCPN-FDLNCIREYFSRNSQCQLVMGSVP 252
++++ D+ + K PC + F NC++++ + C L VP
Sbjct: 112 DDMNENDEKQATKMPCGHIFGKNCLQKWLENHCTCPLCRKEVP 154
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 27.5 bits (58), Expect = 2.8
Identities = 12/22 (54%), Positives = 12/22 (54%), Gaps = 2/22 (9%)
Frame = +1
Query: 865 PXPPPTPXXPXPP--PPPXLPP 924
P PPP P PP PPP PP
Sbjct: 9 PPPPPPPPGFEPPSQPPPPPPP 30
Score = 25.8 bits (54), Expect = 8.7
Identities = 11/21 (52%), Positives = 11/21 (52%), Gaps = 3/21 (14%)
Frame = +1
Query: 871 PPPTPXXPXPPP---PPXLPP 924
PP P P PPP PP PP
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPP 25
>SPBC1921.06c |pvg3|mug49|beta-1,3-galactosyltransferase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 378
Score = 27.5 bits (58), Expect = 2.8
Identities = 19/61 (31%), Positives = 29/61 (47%), Gaps = 4/61 (6%)
Frame = -2
Query: 301 NYYSVYLLCSNLKVVDLVQIPLLIDIENFLRNIHE----CSSSRSSDRVF*CFLGHRPDP 134
NY YL + V L IPLL + N+ + ++E CS+ ++R+ C P P
Sbjct: 316 NYRQSYLRIDAIAVHKLKSIPLLSTVSNWFKKMYEHRANCSALIETERLS-CLQATIPLP 374
Query: 133 S 131
S
Sbjct: 375 S 375
>SPAC19B12.03 |bgs3||1,3-beta-glucan synthase subunit
Bgs3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1826
Score = 27.1 bits (57), Expect = 3.8
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = +1
Query: 103 IASAVAFGENLDPADDPKNIKRPCPNF 183
I S A+GE L D NI+ P P+F
Sbjct: 23 INSNYAYGEQLQSNDQYNNIQHPAPSF 49
>SPAC3A11.08 |pcu4|cul4, Cul-4|cullin 4|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 734
Score = 26.2 bits (55), Expect = 6.6
Identities = 16/53 (30%), Positives = 24/53 (45%)
Frame = -2
Query: 322 HHDILRLNYYSVYLLCSNLKVVDLVQIPLLIDIENFLRNIHECSSSRSSDRVF 164
H D + S+ L L V +QIP L + N+H SS+S+D +
Sbjct: 136 HPDYPTIEELSLSLFREKLMAVKNIQIPFLNSLLQSFENLH---SSKSTDHAY 185
>SPBC17D1.07c |||GTPase regulator |Schizosaccharomyces pombe|chr
2|||Manual
Length = 962
Score = 26.2 bits (55), Expect = 6.6
Identities = 13/46 (28%), Positives = 23/46 (50%)
Frame = +1
Query: 259 LPLNYYRVDIPNSNLTVEYHDVKTRGFDTIKIIXFXNANVYRCISE 396
L N + DI + L D T+ FDT+K + + +A + + + E
Sbjct: 805 LKKNNSQKDIHRNPLLSHVFDTNTKSFDTLKTLNYKHAILKKSMGE 850
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 25.8 bits (54), Expect = 8.7
Identities = 11/19 (57%), Positives = 11/19 (57%), Gaps = 2/19 (10%)
Frame = +1
Query: 874 PPTPXXPXPPP--PPXLPP 924
PP P P PP PP LPP
Sbjct: 415 PPVPTPPSLPPSAPPSLPP 433
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,437,880
Number of Sequences: 5004
Number of extensions: 44113
Number of successful extensions: 235
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 132
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 197
length of database: 2,362,478
effective HSP length: 73
effective length of database: 1,997,186
effective search space used: 469338710
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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