Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP11_F_D23
         (886 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF010403-1|AAC51734.1| 5262|Homo sapiens ALR protein.                  31   7.3  
BC064495-1|AAH64495.1|  299|Homo sapiens RCOR1 protein protein.        30   9.7  
BC051003-1|AAH51003.1|  293|Homo sapiens RCOR1 protein protein.        30   9.7  
BC001140-1|AAH01140.1|  150|Homo sapiens dual specificity phosph...    30   9.7  
AL590560-1|CAH71101.1|  150|Homo sapiens dual specificity phosph...    30   9.7  
AK000449-1|BAA91172.1|  150|Homo sapiens protein ( Homo sapiens ...    30   9.7  
AF155595-1|AAF01498.1|  482|Homo sapiens CoREST protein protein.       30   9.7  
AB164404-1|BAD12141.1|  150|Homo sapiens low-molecular-mass dual...    30   9.7  

>AF010403-1|AAC51734.1| 5262|Homo sapiens ALR protein.
          Length = 5262

 Score = 30.7 bits (66), Expect = 7.3
 Identities = 14/33 (42%), Positives = 16/33 (48%)
 Frame = +1

Query: 787 PPVXPDXWXPYPVXIXLSPTPXKNXLSPPGXXP 885
           PP       P PV   LSP P ++ LSPP   P
Sbjct: 646 PPPEVSRLSPLPVVSRLSPPPEESPLSPPALSP 678


>BC064495-1|AAH64495.1|  299|Homo sapiens RCOR1 protein protein.
          Length = 299

 Score = 30.3 bits (65), Expect = 9.7
 Identities = 18/43 (41%), Positives = 22/43 (51%)
 Frame = -1

Query: 691 EKGGQVSGKRQGRNRRAHEGLPGGKRLVSL*SCRVSPPLT*AS 563
           EKG +VSGKR+GRN  A           +  +C  SP  T AS
Sbjct: 3   EKGPEVSGKRRGRNNAAASASAAAASAAASAAC-ASPAATAAS 44


>BC051003-1|AAH51003.1|  293|Homo sapiens RCOR1 protein protein.
          Length = 293

 Score = 30.3 bits (65), Expect = 9.7
 Identities = 18/43 (41%), Positives = 22/43 (51%)
 Frame = -1

Query: 691 EKGGQVSGKRQGRNRRAHEGLPGGKRLVSL*SCRVSPPLT*AS 563
           EKG +VSGKR+GRN  A           +  +C  SP  T AS
Sbjct: 3   EKGPEVSGKRRGRNNAAASASAAAASAAASAAC-ASPAATAAS 44


>BC001140-1|AAH01140.1|  150|Homo sapiens dual specificity
           phosphatase 23 protein.
          Length = 150

 Score = 30.3 bits (65), Expect = 9.7
 Identities = 14/27 (51%), Positives = 15/27 (55%), Gaps = 1/27 (3%)
 Frame = +3

Query: 609 TRRFPPGSPSC-ALLFRPCRLPDTCPP 686
           T R PP S SC  L     R+PD CPP
Sbjct: 43  TERGPPHSDSCPGLTLHRLRIPDFCPP 69


>AL590560-1|CAH71101.1|  150|Homo sapiens dual specificity
           phosphatase 23 protein.
          Length = 150

 Score = 30.3 bits (65), Expect = 9.7
 Identities = 14/27 (51%), Positives = 15/27 (55%), Gaps = 1/27 (3%)
 Frame = +3

Query: 609 TRRFPPGSPSC-ALLFRPCRLPDTCPP 686
           T R PP S SC  L     R+PD CPP
Sbjct: 43  TERGPPHSDSCPGLTLHRLRIPDFCPP 69


>AK000449-1|BAA91172.1|  150|Homo sapiens protein ( Homo sapiens
           cDNA FLJ20442 fis, clone KAT04828. ).
          Length = 150

 Score = 30.3 bits (65), Expect = 9.7
 Identities = 14/27 (51%), Positives = 15/27 (55%), Gaps = 1/27 (3%)
 Frame = +3

Query: 609 TRRFPPGSPSC-ALLFRPCRLPDTCPP 686
           T R PP S SC  L     R+PD CPP
Sbjct: 43  TERGPPHSDSCPGLTLHRLRIPDFCPP 69


>AF155595-1|AAF01498.1|  482|Homo sapiens CoREST protein protein.
          Length = 482

 Score = 30.3 bits (65), Expect = 9.7
 Identities = 18/43 (41%), Positives = 22/43 (51%)
 Frame = -1

Query: 691 EKGGQVSGKRQGRNRRAHEGLPGGKRLVSL*SCRVSPPLT*AS 563
           EKG +VSGKR+GRN  A           +  +C  SP  T AS
Sbjct: 3   EKGPEVSGKRRGRNNAAASASAAAASAAASAAC-ASPAATAAS 44


>AB164404-1|BAD12141.1|  150|Homo sapiens low-molecular-mass
           dual-specificity phosphatase 3 protein.
          Length = 150

 Score = 30.3 bits (65), Expect = 9.7
 Identities = 14/27 (51%), Positives = 15/27 (55%), Gaps = 1/27 (3%)
 Frame = +3

Query: 609 TRRFPPGSPSC-ALLFRPCRLPDTCPP 686
           T R PP S SC  L     R+PD CPP
Sbjct: 43  TERGPPHSDSCPGLTLHRLRIPDFCPP 69


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 125,937,639
Number of Sequences: 237096
Number of extensions: 2812135
Number of successful extensions: 8011
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 7492
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7988
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11326166088
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)