Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP11_F_D23
         (886 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    24   2.1  
AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    23   4.9  
DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor pr...    22   6.5  
AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    22   6.5  
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    22   6.5  
AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase pr...    22   8.6  

>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
           AbsCAM-Ig7A protein.
          Length = 1919

 Score = 23.8 bits (49), Expect = 2.1
 Identities = 10/28 (35%), Positives = 15/28 (53%)
 Frame = +1

Query: 13  DLTIGNS*DLNCGTAAADLPLXRVNWIQ 96
           DL +G    L C     DLPL  ++W++
Sbjct: 621 DLHLGERTTLTCSVTRGDLPL-SISWLK 647


>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score = 22.6 bits (46), Expect = 4.9
 Identities = 9/29 (31%), Positives = 11/29 (37%)
 Frame = -3

Query: 563 DFCDARSGGRSLWKNASNAAFLRFLAFCW 477
           D C   SGG  LW+N      +      W
Sbjct: 343 DACQMDSGGPVLWQNPRTKRLVNIGIISW 371


>DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor
           protein.
          Length = 459

 Score = 22.2 bits (45), Expect = 6.5
 Identities = 11/31 (35%), Positives = 16/31 (51%)
 Frame = +3

Query: 546 TSITKIDAQVRGGETRQDYKDTRRFPPGSPS 638
           T+I  I   V   + R  +K+T R  P +PS
Sbjct: 309 TTINPILYNVMSAKYRNAFKETCRCSPSNPS 339


>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 22.2 bits (45), Expect = 6.5
 Identities = 11/29 (37%), Positives = 16/29 (55%)
 Frame = +1

Query: 562 STLKSEVAKPDRTIKIPGVSPLEAPRALS 648
           S++  +VA   R   IP +SP    +ALS
Sbjct: 79  SSVSLQVANLLRLFHIPQISPASTAKALS 107


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 22.2 bits (45), Expect = 6.5
 Identities = 11/29 (37%), Positives = 16/29 (55%)
 Frame = +1

Query: 562 STLKSEVAKPDRTIKIPGVSPLEAPRALS 648
           S++  +VA   R   IP +SP    +ALS
Sbjct: 169 SSVSLQVANLLRLFHIPQISPASTAKALS 197


>AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase
           protein.
          Length = 342

 Score = 21.8 bits (44), Expect = 8.6
 Identities = 9/27 (33%), Positives = 10/27 (37%)
 Frame = +1

Query: 724 PXVXIXVRCXSFXPSWAVCPKPPVXPD 804
           P   +  R       W V P PP  PD
Sbjct: 249 PHTSLVTRQKLLELGWDVLPHPPYSPD 275


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 234,283
Number of Sequences: 438
Number of extensions: 5661
Number of successful extensions: 12
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 28766349
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)