Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP11_F_D22
(904 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 31 0.22
SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr 1... 25 0.72
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 29 1.2
SPBC216.07c |tor2|SPBC646.01c|phosphatidylinositol kinase Tor2|S... 28 1.6
SPAC17C9.06 |sam50||SAM complex subunit Sam50 |Schizosaccharomyc... 28 2.1
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 28 2.1
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 28 2.1
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 27 2.7
SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr... 27 3.6
SPAC328.04 |||AAA family ATPase, unknown biological role|Schizos... 27 4.8
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 27 4.8
SPBC947.01 |||AAA family ATPase, unknown biological role|Schizos... 27 4.8
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 27 4.8
SPAC2F3.14c |||conserved fungal protein|Schizosaccharomyces pomb... 26 6.4
SPCC1450.09c |||phospholipase |Schizosaccharomyces pombe|chr 3||... 26 6.4
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 26 8.4
SPAC20G4.02c |fus1||formin Fus1|Schizosaccharomyces pombe|chr 1|... 26 8.4
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 31.1 bits (67), Expect = 0.22
Identities = 23/57 (40%), Positives = 25/57 (43%)
Frame = -2
Query: 813 GGWGXXPXKGXFLXXGGPXNPSXXXGXSXXPGXVXXXXXGGGXGGXGGGXGGXGXXG 643
GG+G P G F GGP G G + GGG GG GGG GG G G
Sbjct: 224 GGFGGGP--GGF--EGGPGG--FGGGPGGFGGGLGGF--GGGPGGFGGGPGGHGGPG 272
Score = 30.3 bits (65), Expect = 0.39
Identities = 22/65 (33%), Positives = 23/65 (35%), Gaps = 6/65 (9%)
Frame = -2
Query: 813 GGWGXXPXKGXFLXXGG----PXNPSXXXGXSXXPGXVXXXXXG--GGXGGXGGGXGGXG 652
G G P G F GG + G PG G GG GG GGG GG G
Sbjct: 196 GSGGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGGGPGGFGGGLGGFG 255
Query: 651 XXGXG 637
G
Sbjct: 256 GGPGG 260
Score = 29.5 bits (63), Expect = 0.68
Identities = 12/20 (60%), Positives = 12/20 (60%)
Frame = -2
Query: 696 GGGXGGXGGGXGGXGXXGXG 637
GGG GG GGG GG G G
Sbjct: 248 GGGLGGFGGGPGGFGGGPGG 267
Score = 27.5 bits (58), Expect = 2.8
Identities = 13/22 (59%), Positives = 13/22 (59%), Gaps = 2/22 (9%)
Frame = -2
Query: 696 GGGXGGXGGGXGG--XGXXGXG 637
GGG GG GGG GG G G G
Sbjct: 187 GGGFGGFGGGSGGPPPGPGGFG 208
>SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1841
Score = 25.0 bits (52), Expect(2) = 0.72
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = +2
Query: 659 PPXPPPXPPXPP 694
P PPP PP PP
Sbjct: 942 PAFPPPPPPPPP 953
Score = 22.6 bits (46), Expect(2) = 0.72
Identities = 7/10 (70%), Positives = 7/10 (70%)
Frame = +2
Query: 653 PXPPXPPPXP 682
P PP PPP P
Sbjct: 905 PTPPPPPPLP 914
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 28.7 bits (61), Expect = 1.2
Identities = 15/47 (31%), Positives = 17/47 (36%), Gaps = 2/47 (4%)
Frame = +2
Query: 635 IPXPXXPXPPXPPP--XPPXPPPXXXXXTLPGXXXFPXXXEGXXGPP 769
+P P PP PPP PP P P +P P G P
Sbjct: 1181 VPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLP 1227
Score = 27.5 bits (58), Expect = 2.8
Identities = 20/74 (27%), Positives = 23/74 (31%), Gaps = 3/74 (4%)
Frame = +2
Query: 635 IPXPXXPXPPXPPP---XPPXPPPXXXXXTLPGXXXFPXXXEGXXGPPXXKKXPFXGXXP 805
+P P PP P P PP P P +P P + G P P P
Sbjct: 1161 VPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPV--PPPSTAPP 1218
Query: 806 HPPLKXGXPQXXXP 847
P G P P
Sbjct: 1219 VPTPSAGLPPVPVP 1232
Score = 25.8 bits (54), Expect = 8.4
Identities = 21/77 (27%), Positives = 24/77 (31%), Gaps = 11/77 (14%)
Frame = +2
Query: 635 IPXPXXPXPPXPPPX--PPXPPPXXXXXTLP----GXXXFPXXXEGXXGPPXXKK----- 781
+P P PP P P PP P P +P G P G P +
Sbjct: 1142 VPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVP 1201
Query: 782 XPFXGXXPHPPLKXGXP 832
P G P PP P
Sbjct: 1202 KPSVGVPPVPPPSTAPP 1218
>SPBC216.07c |tor2|SPBC646.01c|phosphatidylinositol kinase
Tor2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 2337
Score = 28.3 bits (60), Expect = 1.6
Identities = 21/67 (31%), Positives = 31/67 (46%), Gaps = 2/67 (2%)
Frame = -2
Query: 363 IVKSIKRNFSAILQPKEAGLELSCR--ELWCKVERNLRVFPFLEVAQSTVNTGVNSDLVH 190
I+ ++K F +I K L+ + R LW K N V L V STVN + D++
Sbjct: 1684 IIPAVKGFFKSIALSK-GNLQDTLRLLNLWFKFGNNSNVINTLNVGISTVNIDIWLDVIP 1742
Query: 189 STRAGVH 169
A +H
Sbjct: 1743 QLIARIH 1749
>SPAC17C9.06 |sam50||SAM complex subunit Sam50 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 475
Score = 27.9 bits (59), Expect = 2.1
Identities = 16/54 (29%), Positives = 26/54 (48%)
Frame = +1
Query: 187 TVNEVRIDPCVNSRLCHLKKGKNAKVSFDFTPQFSTTKLKTGLFGLKNGAEIPF 348
T + PC+++ L + A+ +FT +TT+ G GL+ GA I F
Sbjct: 421 TYKSILSKPCISTGLGLVYATPAARFELNFTLPIATTEKDIGRKGLQFGAGIDF 474
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 27.9 bits (59), Expect = 2.1
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = +2
Query: 638 PXPXXPXPPXPPPXPPXPPP 697
P P P P PP P PPP
Sbjct: 9 PPPPPPPPGFEPPSQPPPPP 28
Score = 27.1 bits (57), Expect = 3.6
Identities = 11/20 (55%), Positives = 11/20 (55%), Gaps = 2/20 (10%)
Frame = +2
Query: 644 PXXPXPPX--PPPXPPXPPP 697
P P PP PP PP PPP
Sbjct: 10 PPPPPPPGFEPPSQPPPPPP 29
Score = 26.2 bits (55), Expect = 6.4
Identities = 12/25 (48%), Positives = 12/25 (48%), Gaps = 7/25 (28%)
Frame = +2
Query: 644 PXXPXPPXPPPX-------PPXPPP 697
P P PP PPP PP PPP
Sbjct: 6 PGNPPPPPPPPGFEPPSQPPPPPPP 30
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 27.9 bits (59), Expect = 2.1
Identities = 22/86 (25%), Positives = 23/86 (26%), Gaps = 2/86 (2%)
Frame = +2
Query: 638 PXPXXPXPPXPPPXPPXPPP-XXXXXTLPGXXXFPXXXEG-XXGPPXXKKXPFXGXXPHP 811
P P P PPP P PP +P P PP P P P
Sbjct: 140 PTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSAPSLP-SAVPPMP 198
Query: 812 PLKXGXPQXXXPXXNXXXXXXXXXPP 889
P P P N PP
Sbjct: 199 PKVPPPPLSQAPVANTSSRPSSFAPP 224
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 27.5 bits (58), Expect = 2.8
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = +2
Query: 638 PXPXXPXPPXPPPXPPXPPP 697
P P P PPP PP PP
Sbjct: 229 PKQADPLPAPPPPPPPTLPP 248
Score = 25.8 bits (54), Expect = 8.4
Identities = 10/21 (47%), Positives = 10/21 (47%)
Frame = +2
Query: 635 IPXPXXPXPPXPPPXPPXPPP 697
IP P P P PP PPP
Sbjct: 223 IPPTYTPKQADPLPAPPPPPP 243
Score = 24.2 bits (50), Expect(2) = 2.7
Identities = 8/14 (57%), Positives = 8/14 (57%)
Frame = +2
Query: 653 PXPPXPPPXPPXPP 694
P PP P PP PP
Sbjct: 273 PPPPATPSQPPRPP 286
Score = 21.4 bits (43), Expect(2) = 2.7
Identities = 7/14 (50%), Positives = 8/14 (57%)
Frame = +2
Query: 635 IPXPXXPXPPXPPP 676
+P P P PP PP
Sbjct: 235 LPAPPPPPPPTLPP 248
>SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 305
Score = 27.1 bits (57), Expect = 3.6
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = -2
Query: 693 GGXGGXGGGXGGXGXXGXG 637
GG GG GGG GG G G
Sbjct: 23 GGRGGFGGGRGGARGGGRG 41
>SPAC328.04 |||AAA family ATPase, unknown biological
role|Schizosaccharomyces pombe|chr 1|||Manual
Length = 741
Score = 26.6 bits (56), Expect = 4.8
Identities = 15/27 (55%), Positives = 17/27 (62%)
Frame = +2
Query: 491 KTMRARCAATERMSGWFSKTAHILYSK 571
KTM AR ATE S +FS +A L SK
Sbjct: 505 KTMLARAVATESRSVFFSISASSLTSK 531
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 26.6 bits (56), Expect = 4.8
Identities = 19/71 (26%), Positives = 20/71 (28%)
Frame = +2
Query: 635 IPXPXXPXPPXPPPXPPXPPPXXXXXTLPGXXXFPXXXEGXXGPPXXKKXPFXGXXPHPP 814
+P P P PP PP PP P P PP P P PP
Sbjct: 417 VPTPPSLPPSAPPSLPPSAPPSLPMGA-PAAPPLP--PSAPIAPPLPAGMP--AAPPLPP 471
Query: 815 LKXGXPQXXXP 847
P P
Sbjct: 472 AAPAPPPAPAP 482
Score = 25.8 bits (54), Expect = 8.4
Identities = 15/46 (32%), Positives = 16/46 (34%)
Frame = +2
Query: 680 PPXPPPXXXXXTLPGXXXFPXXXEGXXGPPXXKKXPFXGXXPHPPL 817
PP PPP G P PP + P G P PPL
Sbjct: 337 PPPPPPPRSNAA--GSIPLPPQGRSAPPPPPPRSAPSTGRQP-PPL 379
>SPBC947.01 |||AAA family ATPase, unknown biological
role|Schizosaccharomyces pombe|chr 2|||Manual
Length = 660
Score = 26.6 bits (56), Expect = 4.8
Identities = 14/28 (50%), Positives = 18/28 (64%)
Frame = +2
Query: 491 KTMRARCAATERMSGWFSKTAHILYSKH 574
KTM AR ATE + +FS +A L SK+
Sbjct: 425 KTMLARAVATEAKATFFSISASSLTSKY 452
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 26.6 bits (56), Expect = 4.8
Identities = 12/25 (48%), Positives = 12/25 (48%), Gaps = 5/25 (20%)
Frame = +2
Query: 638 PXPXXPXPPXPPPX-----PPXPPP 697
P P PP PPP PP PPP
Sbjct: 756 PIMGGPPPPPPPPGVAGAGPPPPPP 780
Score = 25.8 bits (54), Expect = 8.4
Identities = 12/26 (46%), Positives = 12/26 (46%), Gaps = 6/26 (23%)
Frame = +2
Query: 638 PXPXXPXPPXPPPXP------PXPPP 697
P P PP PPP P P PPP
Sbjct: 754 PAPIMGGPPPPPPPPGVAGAGPPPPP 779
>SPAC2F3.14c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 331
Score = 26.2 bits (55), Expect = 6.4
Identities = 13/35 (37%), Positives = 13/35 (37%), Gaps = 1/35 (2%)
Frame = +2
Query: 638 PXPXXPXPPXP-PPXPPXPPPXXXXXTLPGXXXFP 739
P P P P P P PP P LPG P
Sbjct: 108 PLPNEPVPEEPLPGEPPLPDEPVPEEPLPGEPPLP 142
>SPCC1450.09c |||phospholipase |Schizosaccharomyces pombe|chr
3|||Manual
Length = 633
Score = 26.2 bits (55), Expect = 6.4
Identities = 14/45 (31%), Positives = 21/45 (46%)
Frame = -2
Query: 339 FSAILQPKEAGLELSCRELWCKVERNLRVFPFLEVAQSTVNTGVN 205
F +LQ K AG +S +LW + V P A +T ++ N
Sbjct: 220 FEQVLQKKNAGFNVSITDLWGRALALKLVNPLTGGANTTFSSVTN 264
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 25.8 bits (54), Expect = 8.4
Identities = 10/28 (35%), Positives = 12/28 (42%)
Frame = +2
Query: 638 PXPXXPXPPXPPPXPPXPPPXXXXXTLP 721
P P P PP PP P P ++P
Sbjct: 1717 PPSAPPMPAGPPSAPPPPLPASSAPSVP 1744
>SPAC20G4.02c |fus1||formin Fus1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1372
Score = 25.8 bits (54), Expect = 8.4
Identities = 9/18 (50%), Positives = 9/18 (50%)
Frame = +2
Query: 638 PXPXXPXPPXPPPXPPXP 691
P P P PPP PP P
Sbjct: 802 PFKAPPPAPLPPPAPPLP 819
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,132,204
Number of Sequences: 5004
Number of extensions: 61999
Number of successful extensions: 290
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 152
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 235
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 456499320
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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