Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP11_F_D14
(852 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC8C9.04 |||sequence orphan|Schizosaccharomyces pombe|chr 1|||... 34 0.022
SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyce... 33 0.068
SPAC17A5.04c |mde10|mug139|spore wall assembly peptidase Mde10|S... 31 0.21
SPBC30B4.01c |wsc1|SPBC3D6.14c|transmembrane receptor Wsc1 |Schi... 29 0.63
SPCC553.10 |||conserved fungal protein|Schizosaccharomyces pombe... 29 0.63
SPBC428.08c |clr4||histone H3 methyltransferase Clr4|Schizosacch... 27 2.6
SPCC1442.05c |||conserved fungal protein|Schizosaccharomyces pom... 27 3.4
SPAC18G6.10 |||chromosome segregation protein |Schizosaccharomyc... 27 4.5
>SPAC8C9.04 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 647
Score = 34.3 bits (75), Expect = 0.022
Identities = 25/68 (36%), Positives = 31/68 (45%), Gaps = 3/68 (4%)
Frame = +2
Query: 431 TSTTLTFASRTAAKDASTH-CARRPKSARASLTTSRTPAASA--SLHARLDVKMATAPVE 601
T+T S+ A H AR+P S TT TPA SA S HAR K A+AP
Sbjct: 464 TTTASKRVSKHDKASAEKHKVARKPSSTGQEPTTPSTPAKSAQSSKHARRPSKQASAPSS 523
Query: 602 SASAGMAL 625
+ A+
Sbjct: 524 PGTTSAAV 531
>SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1036
Score = 32.7 bits (71), Expect = 0.068
Identities = 23/83 (27%), Positives = 39/83 (46%), Gaps = 1/83 (1%)
Frame = +2
Query: 431 TSTTLTFASRTAAKDASTHCARRP-KSARASLTTSRTPAASASLHARLDVKMATAPVESA 607
TS++L +S T++ AS+ S+ + TTS TP +SA+ + + + S+
Sbjct: 135 TSSSLASSSITSSSLASSSTTSSSLASSSTNSTTSATPTSSATSSSLSSTAASNSATSSS 194
Query: 608 SAGMALNXTTDVNTVCQLAVTTA 676
A +LN TT +TA
Sbjct: 195 LASSSLNSTTSATATSSSLSSTA 217
>SPAC17A5.04c |mde10|mug139|spore wall assembly peptidase
Mde10|Schizosaccharomyces pombe|chr 1|||Manual
Length = 512
Score = 31.1 bits (67), Expect = 0.21
Identities = 24/90 (26%), Positives = 33/90 (36%)
Frame = +1
Query: 439 NPNICEPHCSKGCVNALCTAPEICTCFPDHVKNAGGFCIATCPIGCQNGHCSGRECVCRD 618
NP C+ K +LC + C+ H KNAG C + + C+G C
Sbjct: 338 NP-CCDGKTCKLTKGSLCDDQQDACCYQCHFKNAGTLCRQSTNPCDKPEFCTGISSKCPV 396
Query: 619 GFKLXYGRKYCVPACSNNCAGVGNCTSPNR 708
GR C + G CTS +R
Sbjct: 397 DENWDDGR-ICQDSLGMGSCASGVCTSASR 425
>SPBC30B4.01c |wsc1|SPBC3D6.14c|transmembrane receptor Wsc1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 374
Score = 29.5 bits (63), Expect = 0.63
Identities = 19/74 (25%), Positives = 40/74 (54%), Gaps = 2/74 (2%)
Frame = +2
Query: 431 TSTTLTFASRTAAKDASTHCARRPKSARASLTT--SRTPAASASLHARLDVKMATAPVES 604
TS+T + S +++ +S+ + RP S+ + +TT S T ++ ++ ++ V S
Sbjct: 211 TSSTSSSHSSSSSSSSSSSSSSRPSSSSSFITTMSSSTFISTVTVTPSSSSSSTSSEVPS 270
Query: 605 ASAGMALNXTTDVN 646
++A +ALN + N
Sbjct: 271 STAALALNASKASN 284
>SPCC553.10 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 349
Score = 29.5 bits (63), Expect = 0.63
Identities = 29/147 (19%), Positives = 64/147 (43%), Gaps = 11/147 (7%)
Frame = +2
Query: 308 EYVISKYLQLNLSRIRGRYLKETDPGPISASFVLAAMAT*GTSTTLTFASRTAAKDASTH 487
E + ++ Q N+ + G + S+S V + ++ ++T T +S +++ +S+
Sbjct: 99 EQIYAQSQQFNI--VEGAASSSSSSSSSSSSLVSSTTSSSSSATPSTTSSSSSSSSSSSS 156
Query: 488 CARRPKSARA---SLTTSRTPAASASLHARLDVKMATAP--------VESASAGMALNXT 634
+ + S+ + S ++SRT + + H + P + +A+ G N T
Sbjct: 157 SSSKSSSSSSKSSSRSSSRTTSHRTTSHKSSSYRPTVFPYTTISHYNITNATNGTYCNGT 216
Query: 635 TDVNTVCQLAVTTAPVSVIALHQTDAT 715
N C + + A S L+ T++T
Sbjct: 217 NGTNFTCIVNASNATNSTFWLNGTNST 243
>SPBC428.08c |clr4||histone H3 methyltransferase
Clr4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 490
Score = 27.5 bits (58), Expect = 2.6
Identities = 10/28 (35%), Positives = 16/28 (57%), Gaps = 2/28 (7%)
Frame = +1
Query: 670 NCAGVGNC--TSPNRCDCAPGLSXXTRW 747
NC+ +G C +P+RC+C L T +
Sbjct: 261 NCSSLGGCDLNNPSRCECLDDLDEPTHF 288
>SPCC1442.05c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 177
Score = 27.1 bits (57), Expect = 3.4
Identities = 15/44 (34%), Positives = 20/44 (45%)
Frame = +1
Query: 418 GYVRNIYNPNICEPHCSKGCVNALCTAPEICTCFPDHVKNAGGF 549
G NI+ N P ++ + +L TA CFP KN G F
Sbjct: 85 GMAGNIFARNRIAP--ARWLITSLSTAATFMFCFPKTSKNIGAF 126
>SPAC18G6.10 |||chromosome segregation protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 688
Score = 26.6 bits (56), Expect = 4.5
Identities = 13/46 (28%), Positives = 19/46 (41%)
Frame = +1
Query: 655 PACSNNCAGVGNCTSPNRCDCAPGLSXXTRWIVQSTMSXLPARMLV 792
P+ C C SPN +C PG W S++ P++ V
Sbjct: 365 PSLCRTCPPNAICPSPNYVECKPGYVLYEPW--YSSLGFWPSKYCV 408
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,405,698
Number of Sequences: 5004
Number of extensions: 70121
Number of successful extensions: 207
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 196
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 206
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 422462090
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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