BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP11_F_D13
(873 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF525673-1|AAM82611.1| 60|Anopheles gambiae cecropin CecB prot... 42 3e-05
DQ655702-1|ABG45862.1| 889|Anopheles gambiae Jxc1 protein. 27 0.75
AY146721-1|AAO12081.1| 144|Anopheles gambiae odorant-binding pr... 25 3.0
AY146723-1|AAO12083.1| 155|Anopheles gambiae odorant-binding pr... 25 4.0
AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein. 24 5.3
AF437884-1|AAL84179.1| 144|Anopheles gambiae odorant binding pr... 24 7.0
AJ438610-1|CAD27473.1| 838|Anopheles gambiae putative microtubu... 23 9.2
>AF525673-1|AAM82611.1| 60|Anopheles gambiae cecropin CecB
protein.
Length = 60
Score = 41.5 bits (93), Expect = 3e-05
Identities = 23/63 (36%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Frame = +3
Query: 132 MNFAKILSFV-FALVLALSMTSAAPEPRWKIFKKIEKMGRNIRDGIVKAGPAIEVLGSAK 308
MNF K+ V A+++ + + PRWK K++EK+GRN+ KA P V+ K
Sbjct: 1 MNFTKLFILVAIAVLVVVGVQPVDGAPRWKFGKRLEKLGRNVFRAAKKALP---VIAGYK 57
Query: 309 AIG 317
A+G
Sbjct: 58 ALG 60
>DQ655702-1|ABG45862.1| 889|Anopheles gambiae Jxc1 protein.
Length = 889
Score = 27.1 bits (57), Expect = 0.75
Identities = 11/27 (40%), Positives = 12/27 (44%)
Frame = +3
Query: 753 PPXXPPXXAPTNPLXPXPXGXPFXXXP 833
PP PP P +PL P G P P
Sbjct: 585 PPPPPPMGPPPSPLAGGPLGGPAGSRP 611
>AY146721-1|AAO12081.1| 144|Anopheles gambiae odorant-binding
protein AgamOBP1 protein.
Length = 144
Score = 25.0 bits (52), Expect = 3.0
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = +3
Query: 144 KILSFVFALVLALSMTSAAPEPR 212
K+++FVFA +L SMT PR
Sbjct: 2 KLVTFVFAALLCCSMTLGDTTPR 24
>AY146723-1|AAO12083.1| 155|Anopheles gambiae odorant-binding
protein AgamOBP17 protein.
Length = 155
Score = 24.6 bits (51), Expect = 4.0
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = +3
Query: 144 KILSFVFALVLALSMTSAAPEPR 212
K+++FVFA+++ SMT PR
Sbjct: 2 KLVTFVFAVLVCCSMTLGDTTPR 24
>AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.
Length = 1356
Score = 24.2 bits (50), Expect = 5.3
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = -1
Query: 492 ITFITKKTLADINFKLYLKLNIIMEIQSYT 403
+T IT + + LYL N+I ++QSYT
Sbjct: 606 LTEITGSAIPNSVELLYLNDNLISKVQSYT 635
>AF437884-1|AAL84179.1| 144|Anopheles gambiae odorant binding
protein protein.
Length = 144
Score = 23.8 bits (49), Expect = 7.0
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = +3
Query: 144 KILSFVFALVLALSMTSAAPEPR 212
K+++FVFA ++ SMT PR
Sbjct: 2 KLVTFVFAALVCCSMTLGDTTPR 24
>AJ438610-1|CAD27473.1| 838|Anopheles gambiae putative microtubule
binding protein protein.
Length = 838
Score = 23.4 bits (48), Expect = 9.2
Identities = 9/24 (37%), Positives = 9/24 (37%)
Frame = +2
Query: 746 PXPPXXPSXXRXNQPPXXXPXWPP 817
P PP P R PP P P
Sbjct: 219 PQPPGVPMPMRPQMPPGAVPGMQP 242
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 682,445
Number of Sequences: 2352
Number of extensions: 12006
Number of successful extensions: 40
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 39
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 40
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 93439926
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -