Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP11_F_D11
(895 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC110913-1|AAI10914.1| 806|Homo sapiens valosin-containing prot... 338 2e-92
AL353795-2|CAH70993.1| 806|Homo sapiens valosin-containing prot... 338 2e-92
AF100752-1|AAD43016.1| 806|Homo sapiens transitional endoplasmi... 338 2e-92
AC004472-1|AAC07984.1| 806|Homo sapiens TERA_HUMAN protein. 338 2e-92
BC121794-1|AAI21795.1| 806|Homo sapiens valosin-containing prot... 335 1e-91
AF313485-1|AAG29873.1| 307|Homo sapiens valosin-containing prot... 263 7e-70
BC007562-1|AAH07562.2| 644|Homo sapiens VCP protein protein. 113 8e-25
L38810-1|AAC41735.1| 406|Homo sapiens thyroid receptor interact... 58 3e-08
D44467-1|BAA07919.1| 406|Homo sapiens 26S proteasome subunit p4... 58 3e-08
BC002367-1|AAH02367.3| 406|Homo sapiens proteasome (prosome, ma... 58 3e-08
BC001932-1|AAH01932.1| 406|Homo sapiens proteasome (prosome, ma... 58 3e-08
AF035309-1|AAB88187.1| 280|Homo sapiens protein ( Homo sapiens ... 58 3e-08
AB209036-1|BAD92273.1| 345|Homo sapiens proteasome 26S ATPase s... 58 3e-08
BC048217-1|AAH48217.1| 695|Homo sapiens SPATA5 protein protein. 57 1e-07
AK091384-1|BAC03651.1| 893|Homo sapiens protein ( Homo sapiens ... 57 1e-07
AF479656-1|AAM43608.1| 790|Homo sapiens spermatogenesis associa... 57 1e-07
AF361489-1|AAM00262.1| 893|Homo sapiens spermatogenesis associa... 57 1e-07
L02426-1|AAA35484.1| 440|Homo sapiens 26S protease (S4) regulat... 56 1e-07
CR457044-1|CAG33325.1| 440|Homo sapiens PSMC1 protein. 56 1e-07
BT009826-1|AAP88828.1| 440|Homo sapiens proteasome (prosome, ma... 56 1e-07
BC073818-1|AAH73818.1| 440|Homo sapiens proteasome (prosome, ma... 56 1e-07
BC067741-1|AAH67741.1| 440|Homo sapiens proteasome (prosome, ma... 56 1e-07
BC016368-1|AAH16368.1| 440|Homo sapiens proteasome (prosome, ma... 56 1e-07
BC000512-1|AAH00512.1| 440|Homo sapiens proteasome (prosome, ma... 56 1e-07
AK222668-1|BAD96388.1| 440|Homo sapiens proteasome 26S ATPase s... 56 1e-07
M34079-1|AAA36666.1| 404|Homo sapiens protein ( Human immunodef... 55 3e-07
CR456731-1|CAG33012.1| 404|Homo sapiens PSMC3 protein. 55 3e-07
BC107804-1|AAI07805.1| 491|Homo sapiens PSMC3 protein protein. 55 3e-07
BC106920-1|AAI06921.1| 439|Homo sapiens proteasome (prosome, ma... 55 3e-07
BC073165-1|AAH73165.3| 439|Homo sapiens proteasome (prosome, ma... 55 3e-07
BC008713-1|AAH08713.4| 439|Homo sapiens proteasome (prosome, ma... 55 3e-07
AK222485-1|BAD96205.1| 424|Homo sapiens proteasome 26S ATPase s... 55 3e-07
D78275-1|BAA11338.1| 389|Homo sapiens proteasome subunit p42 pr... 55 4e-07
CR456709-1|CAG32990.1| 389|Homo sapiens PSMC6 protein. 55 4e-07
BT006843-1|AAP35489.1| 389|Homo sapiens proteasome (prosome, ma... 55 4e-07
BC005390-1|AAH05390.1| 389|Homo sapiens proteasome (prosome, ma... 55 4e-07
AF006305-1|AAB61616.1| 389|Homo sapiens 26S proteasome regulato... 55 4e-07
U27515-1|AAC99817.1| 418|Homo sapiens MIP224 protein. 54 5e-07
BT007232-1|AAP35896.1| 418|Homo sapiens proteasome (prosome, ma... 54 5e-07
BC014488-1|AAH14488.1| 418|Homo sapiens proteasome (prosome, ma... 54 5e-07
BC010396-1|AAH10396.1| 387|Homo sapiens proteasome (prosome, ma... 54 5e-07
BC000343-1|AAH00343.1| 418|Homo sapiens proteasome (prosome, ma... 54 5e-07
AC007842-2|AAD39267.1| 418|Homo sapiens ATPase homolog [Homo sa... 54 5e-07
D11094-1|BAA01868.1| 433|Homo sapiens mammalian suppressor of s... 53 1e-06
BC002589-1|AAH02589.1| 433|Homo sapiens proteasome (prosome, ma... 53 1e-06
AF020736-1|AAC32612.1| 418|Homo sapiens ATPase homolog protein. 53 1e-06
AC093701-1|AAS07429.1| 409|Homo sapiens unknown protein. 53 1e-06
AB075520-1|BAE45763.1| 433|Homo sapiens putative protein produc... 53 1e-06
U78772-1|AAB70460.1| 750|Homo sapiens nuclear VCP-like protein ... 53 2e-06
U68140-1|AAB70457.1| 856|Homo sapiens nuclear VCP-like protein ... 53 2e-06
BC012105-1|AAH12105.1| 659|Homo sapiens NVL protein protein. 53 2e-06
AK094821-1|BAC04429.1| 574|Homo sapiens protein ( Homo sapiens ... 52 3e-06
BC113656-1|AAI13657.1| 1390|Homo sapiens ATPase family, AAA doma... 52 4e-06
BC007123-1|AAH07123.1| 939|Homo sapiens ATAD2 protein protein. 52 4e-06
AY598335-1|AAT06746.1| 1390|Homo sapiens L16 protein. 52 4e-06
AK097133-1|BAC04959.1| 978|Homo sapiens protein ( Homo sapiens ... 52 4e-06
BC024032-1|AAH24032.1| 716|Homo sapiens YME1-like 1 (S. cerevis... 48 5e-05
BC023507-1|AAH23507.1| 716|Homo sapiens YME1-like 1 (S. cerevis... 48 5e-05
BC007795-1|AAH07795.1| 740|Homo sapiens YME1-like 1 (S. cerevis... 48 5e-05
AY358484-1|AAQ88848.1| 716|Homo sapiens YME1L1 protein. 48 5e-05
AL162272-2|CAI12217.1| 716|Homo sapiens YME1-like 1 (S. cerevis... 48 5e-05
AL162272-1|CAC19650.2| 773|Homo sapiens YME1-like 1 (S. cerevis... 48 5e-05
AL160291-4|CAI16906.1| 716|Homo sapiens YME1-like 1 (S. cerevis... 48 5e-05
AL160291-3|CAI16907.1| 773|Homo sapiens YME1-like 1 (S. cerevis... 48 5e-05
AJ295618-1|CAB99462.1| 517|Homo sapiens putative ATPases protein. 48 5e-05
AJ132637-1|CAB51858.1| 716|Homo sapiens ATP-dependent metallopr... 48 5e-05
AF151782-1|AAK57555.1| 773|Homo sapiens ATP-dependent metallopr... 48 5e-05
BC122550-1|AAI22551.1| 475|Homo sapiens VCP protein protein. 46 2e-04
BC034999-1|AAH34999.2| 466|Homo sapiens katanin p60 subunit A-l... 46 2e-04
AF313486-1|AAG29874.1| 305|Homo sapiens valosin-containing prot... 46 2e-04
Y18314-1|CAB48398.1| 797|Homo sapiens paraplegin-like protein p... 44 7e-04
BC065016-1|AAH65016.1| 797|Homo sapiens AFG3 ATPase family gene... 44 7e-04
BC051867-1|AAH51867.1| 674|Homo sapiens fidgetin-like 1 protein. 44 7e-04
BC027856-1|AAH27856.1| 674|Homo sapiens FIGNL1 protein protein. 44 7e-04
BC024282-1|AAH24282.1| 812|Homo sapiens Similar to AFG3 ATPase ... 44 7e-04
BC021245-1|AAH21245.2| 122|Homo sapiens AFG3L1 protein protein. 44 7e-04
AK023411-1|BAB14567.1| 254|Homo sapiens protein ( Homo sapiens ... 44 7e-04
AK023142-1|BAB14426.1| 674|Homo sapiens protein ( Homo sapiens ... 44 7e-04
AC018705-1|AAS01996.1| 674|Homo sapiens unknown protein. 44 7e-04
Y16610-1|CAA76314.1| 795|Homo sapiens paraplegin protein. 43 0.002
BC036104-1|AAH36104.1| 795|Homo sapiens spastic paraplegia 7 (p... 43 0.002
BC035929-1|AAH35929.1| 732|Homo sapiens SPG7 protein protein. 43 0.002
AF080525-1|AAD28099.1| 795|Homo sapiens paraplegin protein. 43 0.002
BC073998-1|AAH73998.1| 287|Homo sapiens ATAD1 protein protein. 42 0.002
BC063530-1|AAH63530.1| 330|Homo sapiens ATAD1 protein protein. 42 0.002
BC035575-1|AAH35575.1| 1283|Homo sapiens peroxisome biogenesis f... 42 0.002
AL133327-1|CAI16701.1| 361|Homo sapiens ATPase family, AAA doma... 42 0.002
AK075223-1|BAC11482.1| 361|Homo sapiens protein ( Homo sapiens ... 42 0.002
AF030356-1|AAB99758.1| 1283|Homo sapiens peroxisome biogenesis g... 42 0.002
AF026086-1|AAB87880.1| 1283|Homo sapiens peroxisome biogenesis d... 42 0.002
AC000064-1|AAB46346.1| 541|Homo sapiens WUGSC:H_RG083M05.1 prot... 42 0.002
AB052092-1|BAB59063.1| 1283|Homo sapiens Pex1pG843D protein. 42 0.002
AB052091-1|BAB59062.1| 1283|Homo sapiens Pex1pL664P protein. 42 0.002
AB052090-1|BAB59061.1| 1226|Homo sapiens Pex1p-634del690 protein. 42 0.002
AB008112-1|BAA85162.1| 1283|Homo sapiens PEX1 protein. 42 0.002
BC000981-1|AAH00981.1| 753|Homo sapiens spermatogenesis associa... 42 0.003
AK023232-1|BAB14482.1| 620|Homo sapiens protein ( Homo sapiens ... 42 0.003
AK022348-1|BAB14017.1| 392|Homo sapiens protein ( Homo sapiens ... 42 0.003
BX276089-3|CAI16433.1| 280|Homo sapiens katanin p60 (ATPase-con... 41 0.005
BX276089-2|CAI16431.1| 491|Homo sapiens katanin p60 (ATPase-con... 41 0.005
BC030613-1|AAH30613.1| 744|Homo sapiens N-ethylmaleimide-sensit... 41 0.005
AL078581-3|CAI19506.1| 280|Homo sapiens katanin p60 (ATPase-con... 41 0.005
AL078581-2|CAI19505.1| 491|Homo sapiens katanin p60 (ATPase-con... 41 0.005
AF056022-1|AAC25114.1| 491|Homo sapiens p60 katanin protein. 41 0.005
BC000612-1|AAH00612.1| 490|Homo sapiens katanin p60 subunit A-l... 40 0.009
AL356750-1|CAI13718.1| 490|Homo sapiens katanin p60 subunit A-l... 40 0.009
U56602-1|AAC50655.1| 980|Homo sapiens Pxaaa1p protein. 38 0.037
D83703-1|BAA12069.1| 980|Homo sapiens peroxisome assembly facto... 38 0.037
BC150260-1|AAI50261.1| 584|Homo sapiens spastin protein. 38 0.037
BC048331-1|AAH48331.1| 980|Homo sapiens peroxisomal biogenesis ... 38 0.037
AL158815-3|CAI19463.1| 980|Homo sapiens peroxisomal biogenesis ... 38 0.037
AJ246003-1|CAB60208.1| 616|Homo sapiens spastin protein protein. 38 0.037
AJ246001-1|CAB60141.1| 616|Homo sapiens spastin protein protein. 38 0.037
AF108098-1|AAF62564.1| 980|Homo sapiens peroxisome assembly fac... 38 0.037
AB208906-1|BAD92143.1| 836|Homo sapiens peroxisomal biogenesis ... 38 0.037
AB051077-1|BAB83047.1| 892|Homo sapiens peroxin Pex6p protein. 38 0.037
AB051076-1|BAB83046.1| 980|Homo sapiens peroxine Pex6p protein. 38 0.037
AB029006-1|BAA83035.1| 584|Homo sapiens KIAA1083 protein protein. 38 0.037
U03985-1|AAA17411.1| 751|Homo sapiens protein ( Human N-ethylma... 38 0.049
AF135168-1|AAF70545.1| 744|Homo sapiens N-ethylmaleimide-sensit... 38 0.049
AF102846-1|AAF04745.2| 744|Homo sapiens N-ethylmaleimide-sensit... 38 0.049
BC047932-1|AAH47932.1| 437|Homo sapiens vacuolar protein sortin... 36 0.15
BC039574-1|AAH39574.1| 444|Homo sapiens vacuolar protein sortin... 36 0.15
AY232629-1|AAP59551.1| 444|Homo sapiens cell migration-inducing... 36 0.15
AK001267-1|BAA91590.1| 639|Homo sapiens protein ( Homo sapiens ... 36 0.15
AF282904-1|AAG01471.1| 444|Homo sapiens vacuolar protein sortin... 36 0.15
AF282903-1|AAG01470.1| 437|Homo sapiens vacuolar protein sortin... 36 0.15
AF255952-1|AAK52408.1| 437|Homo sapiens vacuolar protein sortin... 36 0.15
AF195514-1|AAG33022.1| 444|Homo sapiens VPS4-2 ATPase protein. 36 0.15
AF159063-1|AAD49227.1| 437|Homo sapiens SKD1-homolog protein. 36 0.15
AF155740-1|AAD42971.1| 432|Homo sapiens vacuolar sorting protei... 36 0.15
AF112215-1|AAF17203.1| 437|Homo sapiens SKD1 protein protein. 36 0.15
AC093727-1|AAX81992.1| 639|Homo sapiens unknown protein. 36 0.15
BX276089-1|CAI16432.1| 311|Homo sapiens katanin p60 (ATPase-con... 36 0.26
BC063607-1|AAH63607.1| 586|Homo sapiens ATAD3A protein protein. 36 0.26
BC050428-1|AAH50428.1| 311|Homo sapiens KATNA1 protein protein. 36 0.26
BC033109-1|AAH33109.1| 586|Homo sapiens ATAD3A protein protein. 36 0.26
BC014101-1|AAH14101.1| 586|Homo sapiens ATAD3A protein protein. 36 0.26
BC011814-1|AAH11814.1| 586|Homo sapiens ATAD3A protein protein. 36 0.26
BC007803-1|AAH07803.1| 586|Homo sapiens ATAD3A protein protein. 36 0.26
AL645728-11|CAI22954.1| 634|Homo sapiens ATPase family, AAA dom... 36 0.26
AL645728-10|CAI22955.1| 586|Homo sapiens ATPase family, AAA dom... 36 0.26
AL645728-9|CAI22953.1| 571|Homo sapiens ATPase family, AAA doma... 36 0.26
AL078581-1|CAI19504.1| 311|Homo sapiens katanin p60 (ATPase-con... 36 0.26
AK091144-1|BAC03595.1| 634|Homo sapiens protein ( Homo sapiens ... 36 0.26
AK001571-1|BAA91764.1| 586|Homo sapiens protein ( Homo sapiens ... 36 0.26
Z98742-4|CAI95645.1| 481|Homo sapiens lactation elevated 1 prot... 34 0.80
Z98742-1|CAO03482.1| 160|Homo sapiens lactation elevated 1 prot... 34 0.80
BC018445-1|AAH18445.2| 481|Homo sapiens lactation elevated 1 pr... 34 0.80
AL356121-3|CAI95324.1| 481|Homo sapiens lactation elevated 1 pr... 34 0.80
AL356121-1|CAO03616.1| 160|Homo sapiens lactation elevated 1 pr... 34 0.80
AL353706-3|CAI95698.1| 481|Homo sapiens lactation elevated 1 pr... 34 0.80
AL139106-2|CAI95701.1| 481|Homo sapiens lactation elevated 1 pr... 34 0.80
AF520418-1|AAM74228.1| 481|Homo sapiens lactation elevated 1 pr... 34 0.80
BC018701-1|AAH18701.1| 648|Homo sapiens ATPase family, AAA doma... 33 1.1
BC002542-1|AAH02542.1| 648|Homo sapiens ATPase family, AAA doma... 33 1.1
AL391244-1|CAI22656.1| 473|Homo sapiens ATPase family, AAA doma... 33 1.1
AL157945-2|CAI22068.1| 648|Homo sapiens ATPase family, AAA doma... 33 1.1
AL157945-1|CAI22067.1| 473|Homo sapiens ATPase family, AAA doma... 33 1.1
AK024028-1|BAB14787.1| 480|Homo sapiens protein ( Homo sapiens ... 33 1.1
AB033099-1|BAA86587.1| 606|Homo sapiens KIAA1273 protein protein. 33 1.1
AF343078-1|AAK38647.1| 578|Homo sapiens TOB3 protein. 33 1.4
AF132747-1|AAL75948.1| 437|Homo sapiens SKD2 protein protein. 33 1.8
BC007500-1|AAH07500.1| 419|Homo sapiens BCS1-like (yeast) protein. 31 7.5
BC000416-1|AAH00416.1| 419|Homo sapiens BCS1-like (yeast) protein. 31 7.5
AK223518-1|BAD97238.1| 419|Homo sapiens BCS1-like variant protein. 31 7.5
AK097044-1|BAC04933.1| 199|Homo sapiens protein ( Homo sapiens ... 31 7.5
AF516670-1|AAN05490.1| 419|Homo sapiens BCS1-like protein protein. 31 7.5
AF346835-1|AAK29417.1| 419|Homo sapiens BCS1 protein. 31 7.5
AF038195-1|AAB97365.1| 419|Homo sapiens unknown protein. 31 7.5
AF026849-1|AAD08638.1| 419|Homo sapiens h-bcs1 protein. 31 7.5
>BC110913-1|AAI10914.1| 806|Homo sapiens valosin-containing protein
protein.
Length = 806
Score = 338 bits (830), Expect = 2e-92
Identities = 152/198 (76%), Positives = 175/198 (88%)
Frame = +2
Query: 179 RKDRPNRLIVEEAVSDDNSVVALSQAKMEQLQLFRGDTVLLKGKRRKETVCIVLSDDNCP 358
+K+RPNRLIV+EA+++DNSVV+LSQ KM++LQLFRGDTVLLKGK+R+E VCIVLSDD C
Sbjct: 19 QKNRPNRLIVDEAINEDNSVVSLSQPKMDELQLFRGDTVLLKGKKRREAVCIVLSDDTCS 78
Query: 359 DEKIRMXXXXXXXXXXXXSDVVSIAPCPSVKYGKRVHILPIDDSVEGLTGNLFEVYLKPY 538
DEKIRM DV+SI PCP VKYGKR+H+LPIDD+VEG+TGNLFEVYLKPY
Sbjct: 79 DEKIRMNRVVRNNLRVRLGDVISIQPCPDVKYGKRIHVLPIDDTVEGITGNLFEVYLKPY 138
Query: 539 FMEAYRPIHRDDTFMVRGGMRAVEFKVVETDPSPFCIVAPDTVIHCDGEPIKREEEEEAL 718
F+EAYRPI + D F+VRGGMRAVEFKVVETDPSP+CIVAPDTVIHC+GEPIKRE+EEE+L
Sbjct: 139 FLEAYRPIRKGDIFLVRGGMRAVEFKVVETDPSPYCIVAPDTVIHCEGEPIKREDEEESL 198
Query: 719 NAVGYDDIGGCRKQLAQI 772
N VGYDDIGGCRKQLAQI
Sbjct: 199 NEVGYDDIGGCRKQLAQI 216
Score = 72.1 bits (169), Expect = 2e-12
Identities = 31/34 (91%), Positives = 33/34 (97%)
Frame = +3
Query: 792 LRHPSLFKAIGVKPPRGILMYGPPGTGKTLIGRA 893
LRHP+LFKAIGVKPPRGIL+YGPPGTGKTLI RA
Sbjct: 224 LRHPALFKAIGVKPPRGILLYGPPGTGKTLIARA 257
Score = 46.0 bits (104), Expect = 2e-04
Identities = 17/34 (50%), Positives = 23/34 (67%)
Frame = +3
Query: 792 LRHPSLFKAIGVKPPRGILMYGPPGTGKTLIGRA 893
+ HP F G+ P +G+L YGPPG GKTL+ +A
Sbjct: 497 VEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKA 530
>AL353795-2|CAH70993.1| 806|Homo sapiens valosin-containing protein
protein.
Length = 806
Score = 338 bits (830), Expect = 2e-92
Identities = 152/198 (76%), Positives = 175/198 (88%)
Frame = +2
Query: 179 RKDRPNRLIVEEAVSDDNSVVALSQAKMEQLQLFRGDTVLLKGKRRKETVCIVLSDDNCP 358
+K+RPNRLIV+EA+++DNSVV+LSQ KM++LQLFRGDTVLLKGK+R+E VCIVLSDD C
Sbjct: 19 QKNRPNRLIVDEAINEDNSVVSLSQPKMDELQLFRGDTVLLKGKKRREAVCIVLSDDTCS 78
Query: 359 DEKIRMXXXXXXXXXXXXSDVVSIAPCPSVKYGKRVHILPIDDSVEGLTGNLFEVYLKPY 538
DEKIRM DV+SI PCP VKYGKR+H+LPIDD+VEG+TGNLFEVYLKPY
Sbjct: 79 DEKIRMNRVVRNNLRVRLGDVISIQPCPDVKYGKRIHVLPIDDTVEGITGNLFEVYLKPY 138
Query: 539 FMEAYRPIHRDDTFMVRGGMRAVEFKVVETDPSPFCIVAPDTVIHCDGEPIKREEEEEAL 718
F+EAYRPI + D F+VRGGMRAVEFKVVETDPSP+CIVAPDTVIHC+GEPIKRE+EEE+L
Sbjct: 139 FLEAYRPIRKGDIFLVRGGMRAVEFKVVETDPSPYCIVAPDTVIHCEGEPIKREDEEESL 198
Query: 719 NAVGYDDIGGCRKQLAQI 772
N VGYDDIGGCRKQLAQI
Sbjct: 199 NEVGYDDIGGCRKQLAQI 216
Score = 72.1 bits (169), Expect = 2e-12
Identities = 31/34 (91%), Positives = 33/34 (97%)
Frame = +3
Query: 792 LRHPSLFKAIGVKPPRGILMYGPPGTGKTLIGRA 893
LRHP+LFKAIGVKPPRGIL+YGPPGTGKTLI RA
Sbjct: 224 LRHPALFKAIGVKPPRGILLYGPPGTGKTLIARA 257
Score = 46.0 bits (104), Expect = 2e-04
Identities = 17/34 (50%), Positives = 23/34 (67%)
Frame = +3
Query: 792 LRHPSLFKAIGVKPPRGILMYGPPGTGKTLIGRA 893
+ HP F G+ P +G+L YGPPG GKTL+ +A
Sbjct: 497 VEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKA 530
>AF100752-1|AAD43016.1| 806|Homo sapiens transitional endoplasmic
reticulum ATPase protein.
Length = 806
Score = 338 bits (830), Expect = 2e-92
Identities = 152/198 (76%), Positives = 175/198 (88%)
Frame = +2
Query: 179 RKDRPNRLIVEEAVSDDNSVVALSQAKMEQLQLFRGDTVLLKGKRRKETVCIVLSDDNCP 358
+K+RPNRLIV+EA+++DNSVV+LSQ KM++LQLFRGDTVLLKGK+R+E VCIVLSDD C
Sbjct: 19 QKNRPNRLIVDEAINEDNSVVSLSQPKMDELQLFRGDTVLLKGKKRREAVCIVLSDDTCS 78
Query: 359 DEKIRMXXXXXXXXXXXXSDVVSIAPCPSVKYGKRVHILPIDDSVEGLTGNLFEVYLKPY 538
DEKIRM DV+SI PCP VKYGKR+H+LPIDD+VEG+TGNLFEVYLKPY
Sbjct: 79 DEKIRMNRVVRNNLRVRLGDVISIQPCPDVKYGKRIHVLPIDDTVEGITGNLFEVYLKPY 138
Query: 539 FMEAYRPIHRDDTFMVRGGMRAVEFKVVETDPSPFCIVAPDTVIHCDGEPIKREEEEEAL 718
F+EAYRPI + D F+VRGGMRAVEFKVVETDPSP+CIVAPDTVIHC+GEPIKRE+EEE+L
Sbjct: 139 FLEAYRPIRKGDIFLVRGGMRAVEFKVVETDPSPYCIVAPDTVIHCEGEPIKREDEEESL 198
Query: 719 NAVGYDDIGGCRKQLAQI 772
N VGYDDIGGCRKQLAQI
Sbjct: 199 NEVGYDDIGGCRKQLAQI 216
Score = 72.1 bits (169), Expect = 2e-12
Identities = 31/34 (91%), Positives = 33/34 (97%)
Frame = +3
Query: 792 LRHPSLFKAIGVKPPRGILMYGPPGTGKTLIGRA 893
LRHP+LFKAIGVKPPRGIL+YGPPGTGKTLI RA
Sbjct: 224 LRHPALFKAIGVKPPRGILLYGPPGTGKTLIARA 257
Score = 46.0 bits (104), Expect = 2e-04
Identities = 17/34 (50%), Positives = 23/34 (67%)
Frame = +3
Query: 792 LRHPSLFKAIGVKPPRGILMYGPPGTGKTLIGRA 893
+ HP F G+ P +G+L YGPPG GKTL+ +A
Sbjct: 497 VEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKA 530
>AC004472-1|AAC07984.1| 806|Homo sapiens TERA_HUMAN protein.
Length = 806
Score = 338 bits (830), Expect = 2e-92
Identities = 152/198 (76%), Positives = 175/198 (88%)
Frame = +2
Query: 179 RKDRPNRLIVEEAVSDDNSVVALSQAKMEQLQLFRGDTVLLKGKRRKETVCIVLSDDNCP 358
+K+RPNRLIV+EA+++DNSVV+LSQ KM++LQLFRGDTVLLKGK+R+E VCIVLSDD C
Sbjct: 19 QKNRPNRLIVDEAINEDNSVVSLSQPKMDELQLFRGDTVLLKGKKRREAVCIVLSDDTCS 78
Query: 359 DEKIRMXXXXXXXXXXXXSDVVSIAPCPSVKYGKRVHILPIDDSVEGLTGNLFEVYLKPY 538
DEKIRM DV+SI PCP VKYGKR+H+LPIDD+VEG+TGNLFEVYLKPY
Sbjct: 79 DEKIRMNRVVRNNLRVRLGDVISIQPCPDVKYGKRIHVLPIDDTVEGITGNLFEVYLKPY 138
Query: 539 FMEAYRPIHRDDTFMVRGGMRAVEFKVVETDPSPFCIVAPDTVIHCDGEPIKREEEEEAL 718
F+EAYRPI + D F+VRGGMRAVEFKVVETDPSP+CIVAPDTVIHC+GEPIKRE+EEE+L
Sbjct: 139 FLEAYRPIRKGDIFLVRGGMRAVEFKVVETDPSPYCIVAPDTVIHCEGEPIKREDEEESL 198
Query: 719 NAVGYDDIGGCRKQLAQI 772
N VGYDDIGGCRKQLAQI
Sbjct: 199 NEVGYDDIGGCRKQLAQI 216
Score = 72.1 bits (169), Expect = 2e-12
Identities = 31/34 (91%), Positives = 33/34 (97%)
Frame = +3
Query: 792 LRHPSLFKAIGVKPPRGILMYGPPGTGKTLIGRA 893
LRHP+LFKAIGVKPPRGIL+YGPPGTGKTLI RA
Sbjct: 224 LRHPALFKAIGVKPPRGILLYGPPGTGKTLIARA 257
Score = 46.0 bits (104), Expect = 2e-04
Identities = 17/34 (50%), Positives = 23/34 (67%)
Frame = +3
Query: 792 LRHPSLFKAIGVKPPRGILMYGPPGTGKTLIGRA 893
+ HP F G+ P +G+L YGPPG GKTL+ +A
Sbjct: 497 VEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKA 530
>BC121794-1|AAI21795.1| 806|Homo sapiens valosin-containing protein
protein.
Length = 806
Score = 335 bits (823), Expect = 1e-91
Identities = 151/198 (76%), Positives = 174/198 (87%)
Frame = +2
Query: 179 RKDRPNRLIVEEAVSDDNSVVALSQAKMEQLQLFRGDTVLLKGKRRKETVCIVLSDDNCP 358
+K+RPNRLIV+EA+++DNSVV+LSQ KM++LQLFRGDTVLLKGK+R+E VCIVLSDD C
Sbjct: 19 QKNRPNRLIVDEAINEDNSVVSLSQPKMDELQLFRGDTVLLKGKKRREAVCIVLSDDTCS 78
Query: 359 DEKIRMXXXXXXXXXXXXSDVVSIAPCPSVKYGKRVHILPIDDSVEGLTGNLFEVYLKPY 538
DEKIRM DV+SI PCP VKYGKR+H+LPIDD+VEG+TGNLFEVYLKPY
Sbjct: 79 DEKIRMNRVVRNNLRVRLGDVISIQPCPDVKYGKRIHVLPIDDTVEGITGNLFEVYLKPY 138
Query: 539 FMEAYRPIHRDDTFMVRGGMRAVEFKVVETDPSPFCIVAPDTVIHCDGEPIKREEEEEAL 718
F+EAYRPI + D F+VRGGMRAVEFKVVET PSP+CIVAPDTVIHC+GEPIKRE+EEE+L
Sbjct: 139 FLEAYRPIRKGDIFLVRGGMRAVEFKVVETHPSPYCIVAPDTVIHCEGEPIKREDEEESL 198
Query: 719 NAVGYDDIGGCRKQLAQI 772
N VGYDDIGGCRKQLAQI
Sbjct: 199 NEVGYDDIGGCRKQLAQI 216
Score = 72.1 bits (169), Expect = 2e-12
Identities = 31/34 (91%), Positives = 33/34 (97%)
Frame = +3
Query: 792 LRHPSLFKAIGVKPPRGILMYGPPGTGKTLIGRA 893
LRHP+LFKAIGVKPPRGIL+YGPPGTGKTLI RA
Sbjct: 224 LRHPALFKAIGVKPPRGILLYGPPGTGKTLIARA 257
Score = 46.0 bits (104), Expect = 2e-04
Identities = 17/34 (50%), Positives = 23/34 (67%)
Frame = +3
Query: 792 LRHPSLFKAIGVKPPRGILMYGPPGTGKTLIGRA 893
+ HP F G+ P +G+L YGPPG GKTL+ +A
Sbjct: 497 VEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKA 530
>AF313485-1|AAG29873.1| 307|Homo sapiens valosin-containing protein
protein.
Length = 307
Score = 263 bits (644), Expect = 7e-70
Identities = 117/152 (76%), Positives = 130/152 (85%)
Frame = +2
Query: 317 KETVCIVLSDDNCPDEKIRMXXXXXXXXXXXXSDVVSIAPCPSVKYGKRVHILPIDDSVE 496
+E VCIVLSDD C DEKIRM DV+SI PCP VKYGKR+H+LPIDD+VE
Sbjct: 3 REAVCIVLSDDTCSDEKIRMNRVVRNNLRVRLGDVISIQPCPDVKYGKRIHVLPIDDTVE 62
Query: 497 GLTGNLFEVYLKPYFMEAYRPIHRDDTFMVRGGMRAVEFKVVETDPSPFCIVAPDTVIHC 676
G+TGNLFEVYLKPYF+EAYRPI + D F+VRGGMRAVEFKVVETDPSP+CIVAPDTVIHC
Sbjct: 63 GITGNLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRAVEFKVVETDPSPYCIVAPDTVIHC 122
Query: 677 DGEPIKREEEEEALNAVGYDDIGGCRKQLAQI 772
+GEPIKRE+EEE+LN VGYDDIGGCRKQLAQI
Sbjct: 123 EGEPIKREDEEESLNEVGYDDIGGCRKQLAQI 154
Score = 72.1 bits (169), Expect = 2e-12
Identities = 31/34 (91%), Positives = 33/34 (97%)
Frame = +3
Query: 792 LRHPSLFKAIGVKPPRGILMYGPPGTGKTLIGRA 893
LRHP+LFKAIGVKPPRGIL+YGPPGTGKTLI RA
Sbjct: 162 LRHPALFKAIGVKPPRGILLYGPPGTGKTLIARA 195
>BC007562-1|AAH07562.2| 644|Homo sapiens VCP protein protein.
Length = 644
Score = 113 bits (272), Expect = 8e-25
Identities = 49/54 (90%), Positives = 53/54 (98%)
Frame = +2
Query: 611 FKVVETDPSPFCIVAPDTVIHCDGEPIKREEEEEALNAVGYDDIGGCRKQLAQI 772
FKVVETDPSP+CIVAPDTVIHC+GEPIKRE+EEE+LN VGYDDIGGCRKQLAQI
Sbjct: 1 FKVVETDPSPYCIVAPDTVIHCEGEPIKREDEEESLNEVGYDDIGGCRKQLAQI 54
Score = 72.1 bits (169), Expect = 2e-12
Identities = 31/34 (91%), Positives = 33/34 (97%)
Frame = +3
Query: 792 LRHPSLFKAIGVKPPRGILMYGPPGTGKTLIGRA 893
LRHP+LFKAIGVKPPRGIL+YGPPGTGKTLI RA
Sbjct: 62 LRHPALFKAIGVKPPRGILLYGPPGTGKTLIARA 95
Score = 46.0 bits (104), Expect = 2e-04
Identities = 17/34 (50%), Positives = 23/34 (67%)
Frame = +3
Query: 792 LRHPSLFKAIGVKPPRGILMYGPPGTGKTLIGRA 893
+ HP F G+ P +G+L YGPPG GKTL+ +A
Sbjct: 335 VEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKA 368
>L38810-1|AAC41735.1| 406|Homo sapiens thyroid receptor interactor
protein.
Length = 406
Score = 58.4 bits (135), Expect = 3e-08
Identities = 21/34 (61%), Positives = 30/34 (88%)
Frame = +3
Query: 792 LRHPSLFKAIGVKPPRGILMYGPPGTGKTLIGRA 893
++HP LF+A+G+ P+G+L+YGPPGTGKTL+ RA
Sbjct: 169 VKHPELFEALGIAQPKGVLLYGPPGTGKTLLARA 202
>D44467-1|BAA07919.1| 406|Homo sapiens 26S proteasome subunit p45
protein.
Length = 406
Score = 58.4 bits (135), Expect = 3e-08
Identities = 21/34 (61%), Positives = 30/34 (88%)
Frame = +3
Query: 792 LRHPSLFKAIGVKPPRGILMYGPPGTGKTLIGRA 893
++HP LF+A+G+ P+G+L+YGPPGTGKTL+ RA
Sbjct: 169 VKHPELFEALGIAQPKGVLLYGPPGTGKTLLARA 202
>BC002367-1|AAH02367.3| 406|Homo sapiens proteasome (prosome,
macropain) 26S subunit, ATPase, 5 protein.
Length = 406
Score = 58.4 bits (135), Expect = 3e-08
Identities = 21/34 (61%), Positives = 30/34 (88%)
Frame = +3
Query: 792 LRHPSLFKAIGVKPPRGILMYGPPGTGKTLIGRA 893
++HP LF+A+G+ P+G+L+YGPPGTGKTL+ RA
Sbjct: 169 VKHPELFEALGIAQPKGVLLYGPPGTGKTLLARA 202
>BC001932-1|AAH01932.1| 406|Homo sapiens proteasome (prosome,
macropain) 26S subunit, ATPase, 5 protein.
Length = 406
Score = 58.4 bits (135), Expect = 3e-08
Identities = 21/34 (61%), Positives = 30/34 (88%)
Frame = +3
Query: 792 LRHPSLFKAIGVKPPRGILMYGPPGTGKTLIGRA 893
++HP LF+A+G+ P+G+L+YGPPGTGKTL+ RA
Sbjct: 169 VKHPELFEALGIAQPKGVLLYGPPGTGKTLLARA 202
>AF035309-1|AAB88187.1| 280|Homo sapiens protein ( Homo sapiens
clone 23598 mRNA, complete cds. ).
Length = 280
Score = 58.4 bits (135), Expect = 3e-08
Identities = 21/34 (61%), Positives = 30/34 (88%)
Frame = +3
Query: 792 LRHPSLFKAIGVKPPRGILMYGPPGTGKTLIGRA 893
++HP LF+A+G+ P+G+L+YGPPGTGKTL+ RA
Sbjct: 43 VKHPELFEALGIAQPKGVLLYGPPGTGKTLLARA 76
>AB209036-1|BAD92273.1| 345|Homo sapiens proteasome 26S ATPase
subunit 5 variant protein.
Length = 345
Score = 58.4 bits (135), Expect = 3e-08
Identities = 21/34 (61%), Positives = 30/34 (88%)
Frame = +3
Query: 792 LRHPSLFKAIGVKPPRGILMYGPPGTGKTLIGRA 893
++HP LF+A+G+ P+G+L+YGPPGTGKTL+ RA
Sbjct: 165 VKHPELFEALGIAQPKGVLLYGPPGTGKTLLARA 198
>BC048217-1|AAH48217.1| 695|Homo sapiens SPATA5 protein protein.
Length = 695
Score = 56.8 bits (131), Expect = 1e-07
Identities = 22/34 (64%), Positives = 28/34 (82%)
Frame = +3
Query: 792 LRHPSLFKAIGVKPPRGILMYGPPGTGKTLIGRA 893
L+ P LFK+ G+ PRG+L+YGPPGTGKT+I RA
Sbjct: 372 LKQPELFKSYGIPAPRGVLLYGPPGTGKTMIARA 405
Score = 51.2 bits (117), Expect = 5e-06
Identities = 18/34 (52%), Positives = 27/34 (79%)
Frame = +3
Query: 792 LRHPSLFKAIGVKPPRGILMYGPPGTGKTLIGRA 893
L+HP F +G++PP+G+L+YGPPG KT+I +A
Sbjct: 646 LKHPESFIRMGIQPPKGVLLYGPPGCSKTMIAKA 679
>AK091384-1|BAC03651.1| 893|Homo sapiens protein ( Homo sapiens
cDNA FLJ34065 fis, clone FCBBF3000536, highly similar to
Mus musculus spermatogenesis associated factor (SPAF)
mRNA. ).
Length = 893
Score = 56.8 bits (131), Expect = 1e-07
Identities = 22/34 (64%), Positives = 28/34 (82%)
Frame = +3
Query: 792 LRHPSLFKAIGVKPPRGILMYGPPGTGKTLIGRA 893
L+ P LFK+ G+ PRG+L+YGPPGTGKT+I RA
Sbjct: 373 LKQPELFKSYGIPAPRGVLLYGPPGTGKTMIARA 406
Score = 51.2 bits (117), Expect = 5e-06
Identities = 18/34 (52%), Positives = 27/34 (79%)
Frame = +3
Query: 792 LRHPSLFKAIGVKPPRGILMYGPPGTGKTLIGRA 893
L+HP F +G++PP+G+L+YGPPG KT+I +A
Sbjct: 647 LKHPESFIRMGIQPPKGVLLYGPPGCSKTMIAKA 680
>AF479656-1|AAM43608.1| 790|Homo sapiens spermatogenesis associated
factor protein protein.
Length = 790
Score = 56.8 bits (131), Expect = 1e-07
Identities = 22/34 (64%), Positives = 28/34 (82%)
Frame = +3
Query: 792 LRHPSLFKAIGVKPPRGILMYGPPGTGKTLIGRA 893
L+ P LFK+ G+ PRG+L+YGPPGTGKT+I RA
Sbjct: 373 LKQPELFKSYGIPAPRGVLLYGPPGTGKTMIARA 406
Score = 51.2 bits (117), Expect = 5e-06
Identities = 18/34 (52%), Positives = 27/34 (79%)
Frame = +3
Query: 792 LRHPSLFKAIGVKPPRGILMYGPPGTGKTLIGRA 893
L+HP F +G++PP+G+L+YGPPG KT+I +A
Sbjct: 647 LKHPESFIRMGIQPPKGVLLYGPPGCSKTMIAKA 680
>AF361489-1|AAM00262.1| 893|Homo sapiens spermatogenesis associated
factor protein.
Length = 893
Score = 56.8 bits (131), Expect = 1e-07
Identities = 22/34 (64%), Positives = 28/34 (82%)
Frame = +3
Query: 792 LRHPSLFKAIGVKPPRGILMYGPPGTGKTLIGRA 893
L+ P LFK+ G+ PRG+L+YGPPGTGKT+I RA
Sbjct: 373 LKQPELFKSYGIPAPRGVLLYGPPGTGKTMIARA 406
Score = 51.2 bits (117), Expect = 5e-06
Identities = 18/34 (52%), Positives = 27/34 (79%)
Frame = +3
Query: 792 LRHPSLFKAIGVKPPRGILMYGPPGTGKTLIGRA 893
L+HP F +G++PP+G+L+YGPPG KT+I +A
Sbjct: 647 LKHPESFIRMGIQPPKGVLLYGPPGCSKTMIAKA 680
>L02426-1|AAA35484.1| 440|Homo sapiens 26S protease (S4) regulatory
subunit protein.
Length = 440
Score = 56.4 bits (130), Expect = 1e-07
Identities = 19/34 (55%), Positives = 29/34 (85%)
Frame = +3
Query: 792 LRHPSLFKAIGVKPPRGILMYGPPGTGKTLIGRA 893
L HP ++ +G+KPP+G+++YGPPGTGKTL+ +A
Sbjct: 205 LTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKA 238
>CR457044-1|CAG33325.1| 440|Homo sapiens PSMC1 protein.
Length = 440
Score = 56.4 bits (130), Expect = 1e-07
Identities = 19/34 (55%), Positives = 29/34 (85%)
Frame = +3
Query: 792 LRHPSLFKAIGVKPPRGILMYGPPGTGKTLIGRA 893
L HP ++ +G+KPP+G+++YGPPGTGKTL+ +A
Sbjct: 205 LTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKA 238
>BT009826-1|AAP88828.1| 440|Homo sapiens proteasome (prosome,
macropain) 26S subunit, ATPase, 1 protein.
Length = 440
Score = 56.4 bits (130), Expect = 1e-07
Identities = 19/34 (55%), Positives = 29/34 (85%)
Frame = +3
Query: 792 LRHPSLFKAIGVKPPRGILMYGPPGTGKTLIGRA 893
L HP ++ +G+KPP+G+++YGPPGTGKTL+ +A
Sbjct: 205 LTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKA 238
>BC073818-1|AAH73818.1| 440|Homo sapiens proteasome (prosome,
macropain) 26S subunit, ATPase, 1 protein.
Length = 440
Score = 56.4 bits (130), Expect = 1e-07
Identities = 19/34 (55%), Positives = 29/34 (85%)
Frame = +3
Query: 792 LRHPSLFKAIGVKPPRGILMYGPPGTGKTLIGRA 893
L HP ++ +G+KPP+G+++YGPPGTGKTL+ +A
Sbjct: 205 LTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKA 238
>BC067741-1|AAH67741.1| 440|Homo sapiens proteasome (prosome,
macropain) 26S subunit, ATPase, 1 protein.
Length = 440
Score = 56.4 bits (130), Expect = 1e-07
Identities = 19/34 (55%), Positives = 29/34 (85%)
Frame = +3
Query: 792 LRHPSLFKAIGVKPPRGILMYGPPGTGKTLIGRA 893
L HP ++ +G+KPP+G+++YGPPGTGKTL+ +A
Sbjct: 205 LTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKA 238
>BC016368-1|AAH16368.1| 440|Homo sapiens proteasome (prosome,
macropain) 26S subunit, ATPase, 1 protein.
Length = 440
Score = 56.4 bits (130), Expect = 1e-07
Identities = 19/34 (55%), Positives = 29/34 (85%)
Frame = +3
Query: 792 LRHPSLFKAIGVKPPRGILMYGPPGTGKTLIGRA 893
L HP ++ +G+KPP+G+++YGPPGTGKTL+ +A
Sbjct: 205 LTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKA 238
>BC000512-1|AAH00512.1| 440|Homo sapiens proteasome (prosome,
macropain) 26S subunit, ATPase, 1 protein.
Length = 440
Score = 56.4 bits (130), Expect = 1e-07
Identities = 19/34 (55%), Positives = 29/34 (85%)
Frame = +3
Query: 792 LRHPSLFKAIGVKPPRGILMYGPPGTGKTLIGRA 893
L HP ++ +G+KPP+G+++YGPPGTGKTL+ +A
Sbjct: 205 LTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKA 238
>AK222668-1|BAD96388.1| 440|Homo sapiens proteasome 26S ATPase
subunit 1 variant protein.
Length = 440
Score = 56.4 bits (130), Expect = 1e-07
Identities = 19/34 (55%), Positives = 29/34 (85%)
Frame = +3
Query: 792 LRHPSLFKAIGVKPPRGILMYGPPGTGKTLIGRA 893
L HP ++ +G+KPP+G+++YGPPGTGKTL+ +A
Sbjct: 205 LTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKA 238
>M34079-1|AAA36666.1| 404|Homo sapiens protein ( Human
immunodeficiency virus tat transactivator binding
protein-1 (tbp-1) mRNA, complete cds. ).
Length = 404
Score = 55.2 bits (127), Expect = 3e-07
Identities = 20/34 (58%), Positives = 28/34 (82%)
Frame = +3
Query: 792 LRHPSLFKAIGVKPPRGILMYGPPGTGKTLIGRA 893
+ H F+ +G++PP+G+LMYGPPGTGKTL+ RA
Sbjct: 171 MNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARA 204
>CR456731-1|CAG33012.1| 404|Homo sapiens PSMC3 protein.
Length = 404
Score = 55.2 bits (127), Expect = 3e-07
Identities = 20/34 (58%), Positives = 28/34 (82%)
Frame = +3
Query: 792 LRHPSLFKAIGVKPPRGILMYGPPGTGKTLIGRA 893
+ H F+ +G++PP+G+LMYGPPGTGKTL+ RA
Sbjct: 171 MNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARA 204
>BC107804-1|AAI07805.1| 491|Homo sapiens PSMC3 protein protein.
Length = 491
Score = 55.2 bits (127), Expect = 3e-07
Identities = 20/34 (58%), Positives = 28/34 (82%)
Frame = +3
Query: 792 LRHPSLFKAIGVKPPRGILMYGPPGTGKTLIGRA 893
+ H F+ +G++PP+G+LMYGPPGTGKTL+ RA
Sbjct: 258 MNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARA 291
>BC106920-1|AAI06921.1| 439|Homo sapiens proteasome (prosome,
macropain) 26S subunit, ATPase, 3 protein.
Length = 439
Score = 55.2 bits (127), Expect = 3e-07
Identities = 20/34 (58%), Positives = 28/34 (82%)
Frame = +3
Query: 792 LRHPSLFKAIGVKPPRGILMYGPPGTGKTLIGRA 893
+ H F+ +G++PP+G+LMYGPPGTGKTL+ RA
Sbjct: 206 MNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARA 239
>BC073165-1|AAH73165.3| 439|Homo sapiens proteasome (prosome,
macropain) 26S subunit, ATPase, 3 protein.
Length = 439
Score = 55.2 bits (127), Expect = 3e-07
Identities = 20/34 (58%), Positives = 28/34 (82%)
Frame = +3
Query: 792 LRHPSLFKAIGVKPPRGILMYGPPGTGKTLIGRA 893
+ H F+ +G++PP+G+LMYGPPGTGKTL+ RA
Sbjct: 206 MNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARA 239
>BC008713-1|AAH08713.4| 439|Homo sapiens proteasome (prosome,
macropain) 26S subunit, ATPase, 3 protein.
Length = 439
Score = 55.2 bits (127), Expect = 3e-07
Identities = 20/34 (58%), Positives = 28/34 (82%)
Frame = +3
Query: 792 LRHPSLFKAIGVKPPRGILMYGPPGTGKTLIGRA 893
+ H F+ +G++PP+G+LMYGPPGTGKTL+ RA
Sbjct: 206 MNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARA 239
>AK222485-1|BAD96205.1| 424|Homo sapiens proteasome 26S ATPase
subunit 3 variant protein.
Length = 424
Score = 55.2 bits (127), Expect = 3e-07
Identities = 20/34 (58%), Positives = 28/34 (82%)
Frame = +3
Query: 792 LRHPSLFKAIGVKPPRGILMYGPPGTGKTLIGRA 893
+ H F+ +G++PP+G+LMYGPPGTGKTL+ RA
Sbjct: 191 MNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARA 224
>D78275-1|BAA11338.1| 389|Homo sapiens proteasome subunit p42
protein.
Length = 389
Score = 54.8 bits (126), Expect = 4e-07
Identities = 21/34 (61%), Positives = 28/34 (82%)
Frame = +3
Query: 792 LRHPSLFKAIGVKPPRGILMYGPPGTGKTLIGRA 893
L +P LF+ +G+ PP+G L+YGPPGTGKTL+ RA
Sbjct: 153 LTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARA 186
>CR456709-1|CAG32990.1| 389|Homo sapiens PSMC6 protein.
Length = 389
Score = 54.8 bits (126), Expect = 4e-07
Identities = 21/34 (61%), Positives = 28/34 (82%)
Frame = +3
Query: 792 LRHPSLFKAIGVKPPRGILMYGPPGTGKTLIGRA 893
L +P LF+ +G+ PP+G L+YGPPGTGKTL+ RA
Sbjct: 153 LTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARA 186
>BT006843-1|AAP35489.1| 389|Homo sapiens proteasome (prosome,
macropain) 26S subunit, ATPase, 6 protein.
Length = 389
Score = 54.8 bits (126), Expect = 4e-07
Identities = 21/34 (61%), Positives = 28/34 (82%)
Frame = +3
Query: 792 LRHPSLFKAIGVKPPRGILMYGPPGTGKTLIGRA 893
L +P LF+ +G+ PP+G L+YGPPGTGKTL+ RA
Sbjct: 153 LTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARA 186
>BC005390-1|AAH05390.1| 389|Homo sapiens proteasome (prosome,
macropain) 26S subunit, ATPase, 6 protein.
Length = 389
Score = 54.8 bits (126), Expect = 4e-07
Identities = 21/34 (61%), Positives = 28/34 (82%)
Frame = +3
Query: 792 LRHPSLFKAIGVKPPRGILMYGPPGTGKTLIGRA 893
L +P LF+ +G+ PP+G L+YGPPGTGKTL+ RA
Sbjct: 153 LTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARA 186
>AF006305-1|AAB61616.1| 389|Homo sapiens 26S proteasome regulatory
subunit protein.
Length = 389
Score = 54.8 bits (126), Expect = 4e-07
Identities = 21/34 (61%), Positives = 28/34 (82%)
Frame = +3
Query: 792 LRHPSLFKAIGVKPPRGILMYGPPGTGKTLIGRA 893
L +P LF+ +G+ PP+G L+YGPPGTGKTL+ RA
Sbjct: 153 LTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARA 186
>U27515-1|AAC99817.1| 418|Homo sapiens MIP224 protein.
Length = 418
Score = 54.4 bits (125), Expect = 5e-07
Identities = 21/34 (61%), Positives = 27/34 (79%)
Frame = +3
Query: 792 LRHPSLFKAIGVKPPRGILMYGPPGTGKTLIGRA 893
L H L+K IG+ PPRG+LMYGPPG GKT++ +A
Sbjct: 185 LTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKA 218
>BT007232-1|AAP35896.1| 418|Homo sapiens proteasome (prosome,
macropain) 26S subunit, ATPase, 4 protein.
Length = 418
Score = 54.4 bits (125), Expect = 5e-07
Identities = 21/34 (61%), Positives = 27/34 (79%)
Frame = +3
Query: 792 LRHPSLFKAIGVKPPRGILMYGPPGTGKTLIGRA 893
L H L+K IG+ PPRG+LMYGPPG GKT++ +A
Sbjct: 185 LTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKA 218
>BC014488-1|AAH14488.1| 418|Homo sapiens proteasome (prosome,
macropain) 26S subunit, ATPase, 4 protein.
Length = 418
Score = 54.4 bits (125), Expect = 5e-07
Identities = 21/34 (61%), Positives = 27/34 (79%)
Frame = +3
Query: 792 LRHPSLFKAIGVKPPRGILMYGPPGTGKTLIGRA 893
L H L+K IG+ PPRG+LMYGPPG GKT++ +A
Sbjct: 185 LTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKA 218
>BC010396-1|AAH10396.1| 387|Homo sapiens proteasome (prosome,
macropain) 26S subunit, ATPase, 4 protein.
Length = 387
Score = 54.4 bits (125), Expect = 5e-07
Identities = 21/34 (61%), Positives = 27/34 (79%)
Frame = +3
Query: 792 LRHPSLFKAIGVKPPRGILMYGPPGTGKTLIGRA 893
L H L+K IG+ PPRG+LMYGPPG GKT++ +A
Sbjct: 154 LTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKA 187
>BC000343-1|AAH00343.1| 418|Homo sapiens proteasome (prosome,
macropain) 26S subunit, ATPase, 4 protein.
Length = 418
Score = 54.4 bits (125), Expect = 5e-07
Identities = 21/34 (61%), Positives = 27/34 (79%)
Frame = +3
Query: 792 LRHPSLFKAIGVKPPRGILMYGPPGTGKTLIGRA 893
L H L+K IG+ PPRG+LMYGPPG GKT++ +A
Sbjct: 185 LTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKA 218
>AC007842-2|AAD39267.1| 418|Homo sapiens ATPase homolog [Homo
sapiens] protein.
Length = 418
Score = 54.4 bits (125), Expect = 5e-07
Identities = 21/34 (61%), Positives = 27/34 (79%)
Frame = +3
Query: 792 LRHPSLFKAIGVKPPRGILMYGPPGTGKTLIGRA 893
L H L+K IG+ PPRG+LMYGPPG GKT++ +A
Sbjct: 185 LTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKA 218
>D11094-1|BAA01868.1| 433|Homo sapiens mammalian suppressor of sgv1
protein.
Length = 433
Score = 53.2 bits (122), Expect = 1e-06
Identities = 20/34 (58%), Positives = 27/34 (79%)
Frame = +3
Query: 792 LRHPSLFKAIGVKPPRGILMYGPPGTGKTLIGRA 893
L HP F +G++PP+G+L++GPPGTGKTL RA
Sbjct: 195 LLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARA 228
>BC002589-1|AAH02589.1| 433|Homo sapiens proteasome (prosome,
macropain) 26S subunit, ATPase, 2 protein.
Length = 433
Score = 53.2 bits (122), Expect = 1e-06
Identities = 20/34 (58%), Positives = 27/34 (79%)
Frame = +3
Query: 792 LRHPSLFKAIGVKPPRGILMYGPPGTGKTLIGRA 893
L HP F +G++PP+G+L++GPPGTGKTL RA
Sbjct: 195 LLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARA 228
>AF020736-1|AAC32612.1| 418|Homo sapiens ATPase homolog protein.
Length = 418
Score = 53.2 bits (122), Expect = 1e-06
Identities = 20/32 (62%), Positives = 26/32 (81%)
Frame = +3
Query: 798 HPSLFKAIGVKPPRGILMYGPPGTGKTLIGRA 893
H L+K IG+ PPRG+LMYGPPG GKT++ +A
Sbjct: 187 HFELYKQIGIDPPRGVLMYGPPGCGKTMLAKA 218
>AC093701-1|AAS07429.1| 409|Homo sapiens unknown protein.
Length = 409
Score = 53.2 bits (122), Expect = 1e-06
Identities = 20/34 (58%), Positives = 27/34 (79%)
Frame = +3
Query: 792 LRHPSLFKAIGVKPPRGILMYGPPGTGKTLIGRA 893
L HP F +G++PP+G+L++GPPGTGKTL RA
Sbjct: 171 LLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARA 204
>AB075520-1|BAE45763.1| 433|Homo sapiens putative protein product
of Nbla10058 protein.
Length = 433
Score = 53.2 bits (122), Expect = 1e-06
Identities = 20/34 (58%), Positives = 27/34 (79%)
Frame = +3
Query: 792 LRHPSLFKAIGVKPPRGILMYGPPGTGKTLIGRA 893
L HP F +G++PP+G+L++GPPGTGKTL RA
Sbjct: 195 LLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARA 228
>U78772-1|AAB70460.1| 750|Homo sapiens nuclear VCP-like protein
NVLp.1 protein.
Length = 750
Score = 52.8 bits (121), Expect = 2e-06
Identities = 19/36 (52%), Positives = 28/36 (77%)
Frame = +3
Query: 786 VALRHPSLFKAIGVKPPRGILMYGPPGTGKTLIGRA 893
+ +RHP ++ +GV PPRG+L++GPPG GKTL+ A
Sbjct: 176 IHMRHPEVYHHLGVVPPRGVLLHGPPGCGKTLLAHA 211
Score = 46.4 bits (105), Expect = 1e-04
Identities = 18/34 (52%), Positives = 26/34 (76%)
Frame = +3
Query: 792 LRHPSLFKAIGVKPPRGILMYGPPGTGKTLIGRA 893
+R+P FKA+G+ P G+L+ GPPG GKTL+ +A
Sbjct: 495 VRNPDQFKALGLVTPAGVLLAGPPGCGKTLLAKA 528
>U68140-1|AAB70457.1| 856|Homo sapiens nuclear VCP-like protein
NVLp.2 protein.
Length = 856
Score = 52.8 bits (121), Expect = 2e-06
Identities = 19/36 (52%), Positives = 28/36 (77%)
Frame = +3
Query: 786 VALRHPSLFKAIGVKPPRGILMYGPPGTGKTLIGRA 893
+ +RHP ++ +GV PPRG+L++GPPG GKTL+ A
Sbjct: 282 IHMRHPEVYHHLGVVPPRGVLLHGPPGCGKTLLAHA 317
Score = 46.4 bits (105), Expect = 1e-04
Identities = 18/34 (52%), Positives = 26/34 (76%)
Frame = +3
Query: 792 LRHPSLFKAIGVKPPRGILMYGPPGTGKTLIGRA 893
+R+P FKA+G+ P G+L+ GPPG GKTL+ +A
Sbjct: 601 VRNPDQFKALGLVTPAGVLLAGPPGCGKTLLAKA 634
>BC012105-1|AAH12105.1| 659|Homo sapiens NVL protein protein.
Length = 659
Score = 52.8 bits (121), Expect = 2e-06
Identities = 19/36 (52%), Positives = 28/36 (77%)
Frame = +3
Query: 786 VALRHPSLFKAIGVKPPRGILMYGPPGTGKTLIGRA 893
+ +RHP ++ +GV PPRG+L++GPPG GKTL+ A
Sbjct: 85 IHMRHPEVYHHLGVVPPRGVLLHGPPGCGKTLLAHA 120
Score = 46.4 bits (105), Expect = 1e-04
Identities = 18/34 (52%), Positives = 26/34 (76%)
Frame = +3
Query: 792 LRHPSLFKAIGVKPPRGILMYGPPGTGKTLIGRA 893
+R+P FKA+G+ P G+L+ GPPG GKTL+ +A
Sbjct: 404 VRNPDQFKALGLVTPAGVLLAGPPGCGKTLLAKA 437
>AK094821-1|BAC04429.1| 574|Homo sapiens protein ( Homo sapiens
cDNA FLJ37502 fis, clone BRAWH2016446, moderately
similar to TAT-BINDING HOMOLOG 7. ).
Length = 574
Score = 52.0 bits (119), Expect = 3e-06
Identities = 20/34 (58%), Positives = 26/34 (76%)
Frame = +3
Query: 792 LRHPSLFKAIGVKPPRGILMYGPPGTGKTLIGRA 893
L +P +F+ ++PPRG L YGPPGTGKTL+ RA
Sbjct: 420 LLYPEIFEKFKIQPPRGCLFYGPPGTGKTLVARA 453
>BC113656-1|AAI13657.1| 1390|Homo sapiens ATPase family, AAA domain
containing 2 protein.
Length = 1390
Score = 51.6 bits (118), Expect = 4e-06
Identities = 20/34 (58%), Positives = 26/34 (76%)
Frame = +3
Query: 792 LRHPSLFKAIGVKPPRGILMYGPPGTGKTLIGRA 893
L +P +F+ ++PPRG L YGPPGTGKTL+ RA
Sbjct: 446 LLYPEVFEKFKIQPPRGCLFYGPPGTGKTLVARA 479
>BC007123-1|AAH07123.1| 939|Homo sapiens ATAD2 protein protein.
Length = 939
Score = 51.6 bits (118), Expect = 4e-06
Identities = 20/34 (58%), Positives = 26/34 (76%)
Frame = +3
Query: 792 LRHPSLFKAIGVKPPRGILMYGPPGTGKTLIGRA 893
L +P +F+ ++PPRG L YGPPGTGKTL+ RA
Sbjct: 446 LLYPEVFEKFKIQPPRGCLFYGPPGTGKTLVARA 479
>AY598335-1|AAT06746.1| 1390|Homo sapiens L16 protein.
Length = 1390
Score = 51.6 bits (118), Expect = 4e-06
Identities = 20/34 (58%), Positives = 26/34 (76%)
Frame = +3
Query: 792 LRHPSLFKAIGVKPPRGILMYGPPGTGKTLIGRA 893
L +P +F+ ++PPRG L YGPPGTGKTL+ RA
Sbjct: 446 LLYPEVFEKFKIQPPRGCLFYGPPGTGKTLVARA 479
>AK097133-1|BAC04959.1| 978|Homo sapiens protein ( Homo sapiens
cDNA FLJ39814 fis, clone SPLEN2009970, weakly similar to
TAT-BINDING HOMOLOG 7. ).
Length = 978
Score = 51.6 bits (118), Expect = 4e-06
Identities = 20/34 (58%), Positives = 26/34 (76%)
Frame = +3
Query: 792 LRHPSLFKAIGVKPPRGILMYGPPGTGKTLIGRA 893
L +P +F+ ++PPRG L YGPPGTGKTL+ RA
Sbjct: 446 LLYPEVFEKFKIQPPRGCLFYGPPGTGKTLVARA 479
>BC024032-1|AAH24032.1| 716|Homo sapiens YME1-like 1 (S.
cerevisiae) protein.
Length = 716
Score = 48.0 bits (109), Expect = 5e-05
Identities = 20/34 (58%), Positives = 26/34 (76%)
Frame = +3
Query: 792 LRHPSLFKAIGVKPPRGILMYGPPGTGKTLIGRA 893
L++P F +G K P+GIL+ GPPGTGKTL+ RA
Sbjct: 301 LKNPQKFTILGGKLPKGILLVGPPGTGKTLLARA 334
>BC023507-1|AAH23507.1| 716|Homo sapiens YME1-like 1 (S.
cerevisiae) protein.
Length = 716
Score = 48.0 bits (109), Expect = 5e-05
Identities = 20/34 (58%), Positives = 26/34 (76%)
Frame = +3
Query: 792 LRHPSLFKAIGVKPPRGILMYGPPGTGKTLIGRA 893
L++P F +G K P+GIL+ GPPGTGKTL+ RA
Sbjct: 301 LKNPQKFTILGGKLPKGILLVGPPGTGKTLLARA 334
>BC007795-1|AAH07795.1| 740|Homo sapiens YME1-like 1 (S.
cerevisiae) protein.
Length = 740
Score = 48.0 bits (109), Expect = 5e-05
Identities = 20/34 (58%), Positives = 26/34 (76%)
Frame = +3
Query: 792 LRHPSLFKAIGVKPPRGILMYGPPGTGKTLIGRA 893
L++P F +G K P+GIL+ GPPGTGKTL+ RA
Sbjct: 358 LKNPQKFTILGGKLPKGILLVGPPGTGKTLLARA 391
>AY358484-1|AAQ88848.1| 716|Homo sapiens YME1L1 protein.
Length = 716
Score = 48.0 bits (109), Expect = 5e-05
Identities = 20/34 (58%), Positives = 26/34 (76%)
Frame = +3
Query: 792 LRHPSLFKAIGVKPPRGILMYGPPGTGKTLIGRA 893
L++P F +G K P+GIL+ GPPGTGKTL+ RA
Sbjct: 301 LKNPQKFTILGGKLPKGILLVGPPGTGKTLLARA 334
>AL162272-2|CAI12217.1| 716|Homo sapiens YME1-like 1 (S.
cerevisiae) protein.
Length = 716
Score = 48.0 bits (109), Expect = 5e-05
Identities = 20/34 (58%), Positives = 26/34 (76%)
Frame = +3
Query: 792 LRHPSLFKAIGVKPPRGILMYGPPGTGKTLIGRA 893
L++P F +G K P+GIL+ GPPGTGKTL+ RA
Sbjct: 301 LKNPQKFTILGGKLPKGILLVGPPGTGKTLLARA 334
>AL162272-1|CAC19650.2| 773|Homo sapiens YME1-like 1 (S.
cerevisiae) protein.
Length = 773
Score = 48.0 bits (109), Expect = 5e-05
Identities = 20/34 (58%), Positives = 26/34 (76%)
Frame = +3
Query: 792 LRHPSLFKAIGVKPPRGILMYGPPGTGKTLIGRA 893
L++P F +G K P+GIL+ GPPGTGKTL+ RA
Sbjct: 358 LKNPQKFTILGGKLPKGILLVGPPGTGKTLLARA 391
>AL160291-4|CAI16906.1| 716|Homo sapiens YME1-like 1 (S.
cerevisiae) protein.
Length = 716
Score = 48.0 bits (109), Expect = 5e-05
Identities = 20/34 (58%), Positives = 26/34 (76%)
Frame = +3
Query: 792 LRHPSLFKAIGVKPPRGILMYGPPGTGKTLIGRA 893
L++P F +G K P+GIL+ GPPGTGKTL+ RA
Sbjct: 301 LKNPQKFTILGGKLPKGILLVGPPGTGKTLLARA 334
>AL160291-3|CAI16907.1| 773|Homo sapiens YME1-like 1 (S.
cerevisiae) protein.
Length = 773
Score = 48.0 bits (109), Expect = 5e-05
Identities = 20/34 (58%), Positives = 26/34 (76%)
Frame = +3
Query: 792 LRHPSLFKAIGVKPPRGILMYGPPGTGKTLIGRA 893
L++P F +G K P+GIL+ GPPGTGKTL+ RA
Sbjct: 358 LKNPQKFTILGGKLPKGILLVGPPGTGKTLLARA 391
>AJ295618-1|CAB99462.1| 517|Homo sapiens putative ATPases protein.
Length = 517
Score = 48.0 bits (109), Expect = 5e-05
Identities = 20/34 (58%), Positives = 26/34 (76%)
Frame = +3
Query: 792 LRHPSLFKAIGVKPPRGILMYGPPGTGKTLIGRA 893
L++P F +G K P+GIL+ GPPGTGKTL+ RA
Sbjct: 104 LKNPQKFTILGGKLPKGILLVGPPGTGKTLLARA 137
>AJ132637-1|CAB51858.1| 716|Homo sapiens ATP-dependent
metalloprotease YME1L protein.
Length = 716
Score = 48.0 bits (109), Expect = 5e-05
Identities = 20/34 (58%), Positives = 26/34 (76%)
Frame = +3
Query: 792 LRHPSLFKAIGVKPPRGILMYGPPGTGKTLIGRA 893
L++P F +G K P+GIL+ GPPGTGKTL+ RA
Sbjct: 301 LKNPQKFTILGGKLPKGILLVGPPGTGKTLLARA 334
>AF151782-1|AAK57555.1| 773|Homo sapiens ATP-dependent
metalloprotease FtsH1 homolog protein.
Length = 773
Score = 48.0 bits (109), Expect = 5e-05
Identities = 20/34 (58%), Positives = 26/34 (76%)
Frame = +3
Query: 792 LRHPSLFKAIGVKPPRGILMYGPPGTGKTLIGRA 893
L++P F +G K P+GIL+ GPPGTGKTL+ RA
Sbjct: 358 LKNPQKFTILGGKLPKGILLVGPPGTGKTLLARA 391
>BC122550-1|AAI22551.1| 475|Homo sapiens VCP protein protein.
Length = 475
Score = 46.0 bits (104), Expect = 2e-04
Identities = 17/34 (50%), Positives = 23/34 (67%)
Frame = +3
Query: 792 LRHPSLFKAIGVKPPRGILMYGPPGTGKTLIGRA 893
+ HP F G+ P +G+L YGPPG GKTL+ +A
Sbjct: 166 VEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKA 199
>BC034999-1|AAH34999.2| 466|Homo sapiens katanin p60 subunit A-like
2 protein.
Length = 466
Score = 46.0 bits (104), Expect = 2e-04
Identities = 19/34 (55%), Positives = 27/34 (79%)
Frame = +3
Query: 792 LRHPSLFKAIGVKPPRGILMYGPPGTGKTLIGRA 893
+R+P LF I + P +G+L+YGPPGTGKTL+ +A
Sbjct: 202 IRYPQLFTGI-LSPWKGLLLYGPPGTGKTLLAKA 234
>AF313486-1|AAG29874.1| 305|Homo sapiens valosin-containing protein
protein.
Length = 305
Score = 46.0 bits (104), Expect = 2e-04
Identities = 17/34 (50%), Positives = 23/34 (67%)
Frame = +3
Query: 792 LRHPSLFKAIGVKPPRGILMYGPPGTGKTLIGRA 893
+ HP F G+ P +G+L YGPPG GKTL+ +A
Sbjct: 125 VEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKA 158
>Y18314-1|CAB48398.1| 797|Homo sapiens paraplegin-like protein
protein.
Length = 797
Score = 44.0 bits (99), Expect = 7e-04
Identities = 16/34 (47%), Positives = 26/34 (76%)
Frame = +3
Query: 792 LRHPSLFKAIGVKPPRGILMYGPPGTGKTLIGRA 893
L++P ++ +G K P+G ++ GPPGTGKTL+ +A
Sbjct: 327 LKNPKQYQDLGAKIPKGAILTGPPGTGKTLLAKA 360
>BC065016-1|AAH65016.1| 797|Homo sapiens AFG3 ATPase family gene
3-like 2 (yeast) protein.
Length = 797
Score = 44.0 bits (99), Expect = 7e-04
Identities = 16/34 (47%), Positives = 26/34 (76%)
Frame = +3
Query: 792 LRHPSLFKAIGVKPPRGILMYGPPGTGKTLIGRA 893
L++P ++ +G K P+G ++ GPPGTGKTL+ +A
Sbjct: 327 LKNPKQYQDLGAKIPKGAILTGPPGTGKTLLAKA 360
>BC051867-1|AAH51867.1| 674|Homo sapiens fidgetin-like 1 protein.
Length = 674
Score = 44.0 bits (99), Expect = 7e-04
Identities = 18/30 (60%), Positives = 24/30 (80%)
Frame = +3
Query: 801 PSLFKAIGVKPPRGILMYGPPGTGKTLIGR 890
P +F + PP+GIL++GPPGTGKTLIG+
Sbjct: 424 PDIFTGLR-GPPKGILLFGPPGTGKTLIGK 452
>BC027856-1|AAH27856.1| 674|Homo sapiens FIGNL1 protein protein.
Length = 674
Score = 44.0 bits (99), Expect = 7e-04
Identities = 18/30 (60%), Positives = 24/30 (80%)
Frame = +3
Query: 801 PSLFKAIGVKPPRGILMYGPPGTGKTLIGR 890
P +F + PP+GIL++GPPGTGKTLIG+
Sbjct: 424 PDIFTGLR-GPPKGILLFGPPGTGKTLIGK 452
>BC024282-1|AAH24282.1| 812|Homo sapiens Similar to AFG3 ATPase
family gene 3-like 2 (yeast) protein.
Length = 812
Score = 44.0 bits (99), Expect = 7e-04
Identities = 16/34 (47%), Positives = 26/34 (76%)
Frame = +3
Query: 792 LRHPSLFKAIGVKPPRGILMYGPPGTGKTLIGRA 893
L++P ++ +G K P+G ++ GPPGTGKTL+ +A
Sbjct: 342 LKNPKQYQDLGAKIPKGAILTGPPGTGKTLLAKA 375
>BC021245-1|AAH21245.2| 122|Homo sapiens AFG3L1 protein protein.
Length = 122
Score = 44.0 bits (99), Expect = 7e-04
Identities = 16/34 (47%), Positives = 26/34 (76%)
Frame = +3
Query: 792 LRHPSLFKAIGVKPPRGILMYGPPGTGKTLIGRA 893
L++P ++ +G K P+G ++ GPPGTGKTL+ +A
Sbjct: 7 LKNPKQYQDLGAKIPKGAMLTGPPGTGKTLLAKA 40
>AK023411-1|BAB14567.1| 254|Homo sapiens protein ( Homo sapiens
cDNA FLJ13349 fis, clone OVARC1002138, moderately
similar to SAP1 PROTEIN. ).
Length = 254
Score = 44.0 bits (99), Expect = 7e-04
Identities = 18/30 (60%), Positives = 24/30 (80%)
Frame = +3
Query: 801 PSLFKAIGVKPPRGILMYGPPGTGKTLIGR 890
P +F + PP+GIL++GPPGTGKTLIG+
Sbjct: 4 PDIFTGLR-GPPKGILLFGPPGTGKTLIGK 32
>AK023142-1|BAB14426.1| 674|Homo sapiens protein ( Homo sapiens
cDNA FLJ13080 fis, clone NT2RP3002007, weakly similar to
SAP1 PROTEIN. ).
Length = 674
Score = 44.0 bits (99), Expect = 7e-04
Identities = 18/30 (60%), Positives = 24/30 (80%)
Frame = +3
Query: 801 PSLFKAIGVKPPRGILMYGPPGTGKTLIGR 890
P +F + PP+GIL++GPPGTGKTLIG+
Sbjct: 424 PDIFTGLR-GPPKGILLFGPPGTGKTLIGK 452
>AC018705-1|AAS01996.1| 674|Homo sapiens unknown protein.
Length = 674
Score = 44.0 bits (99), Expect = 7e-04
Identities = 18/30 (60%), Positives = 24/30 (80%)
Frame = +3
Query: 801 PSLFKAIGVKPPRGILMYGPPGTGKTLIGR 890
P +F + PP+GIL++GPPGTGKTLIG+
Sbjct: 424 PDIFTGLR-GPPKGILLFGPPGTGKTLIGK 452
>Y16610-1|CAA76314.1| 795|Homo sapiens paraplegin protein.
Length = 795
Score = 42.7 bits (96), Expect = 0.002
Identities = 17/34 (50%), Positives = 23/34 (67%)
Frame = +3
Query: 792 LRHPSLFKAIGVKPPRGILMYGPPGTGKTLIGRA 893
L+ P F +G K P+G L+ GPPG GKTL+ +A
Sbjct: 328 LKSPERFLQLGAKVPKGALLLGPPGCGKTLLAKA 361
>BC036104-1|AAH36104.1| 795|Homo sapiens spastic paraplegia 7 (pure
and complicated autosomal recessive) protein.
Length = 795
Score = 42.7 bits (96), Expect = 0.002
Identities = 17/34 (50%), Positives = 23/34 (67%)
Frame = +3
Query: 792 LRHPSLFKAIGVKPPRGILMYGPPGTGKTLIGRA 893
L+ P F +G K P+G L+ GPPG GKTL+ +A
Sbjct: 328 LKSPERFLQLGAKVPKGALLLGPPGCGKTLLAKA 361
>BC035929-1|AAH35929.1| 732|Homo sapiens SPG7 protein protein.
Length = 732
Score = 42.7 bits (96), Expect = 0.002
Identities = 17/34 (50%), Positives = 23/34 (67%)
Frame = +3
Query: 792 LRHPSLFKAIGVKPPRGILMYGPPGTGKTLIGRA 893
L+ P F +G K P+G L+ GPPG GKTL+ +A
Sbjct: 265 LKSPERFLQLGAKVPKGALLLGPPGCGKTLLAKA 298
>AF080525-1|AAD28099.1| 795|Homo sapiens paraplegin protein.
Length = 795
Score = 42.7 bits (96), Expect = 0.002
Identities = 17/34 (50%), Positives = 23/34 (67%)
Frame = +3
Query: 792 LRHPSLFKAIGVKPPRGILMYGPPGTGKTLIGRA 893
L+ P F +G K P+G L+ GPPG GKTL+ +A
Sbjct: 328 LKSPERFLQLGAKVPKGALLLGPPGCGKTLLAKA 361
>BC073998-1|AAH73998.1| 287|Homo sapiens ATAD1 protein protein.
Length = 287
Score = 42.3 bits (95), Expect = 0.002
Identities = 15/23 (65%), Positives = 21/23 (91%)
Frame = +3
Query: 825 VKPPRGILMYGPPGTGKTLIGRA 893
++PP+G+L+YGPPG GKTLI +A
Sbjct: 123 LQPPKGVLLYGPPGCGKTLIAKA 145
>BC063530-1|AAH63530.1| 330|Homo sapiens ATAD1 protein protein.
Length = 330
Score = 42.3 bits (95), Expect = 0.002
Identities = 15/23 (65%), Positives = 21/23 (91%)
Frame = +3
Query: 825 VKPPRGILMYGPPGTGKTLIGRA 893
++PP+G+L+YGPPG GKTLI +A
Sbjct: 92 LQPPKGVLLYGPPGCGKTLIAKA 114
>BC035575-1|AAH35575.1| 1283|Homo sapiens peroxisome biogenesis
factor 1 protein.
Length = 1283
Score = 42.3 bits (95), Expect = 0.002
Identities = 16/30 (53%), Positives = 23/30 (76%)
Frame = +3
Query: 795 RHPSLFKAIGVKPPRGILMYGPPGTGKTLI 884
++P LF + ++ GIL+YGPPGTGKTL+
Sbjct: 861 KYPELFANLPIRQRTGILLYGPPGTGKTLL 890
>AL133327-1|CAI16701.1| 361|Homo sapiens ATPase family, AAA domain
containing 1 protein.
Length = 361
Score = 42.3 bits (95), Expect = 0.002
Identities = 15/23 (65%), Positives = 21/23 (91%)
Frame = +3
Query: 825 VKPPRGILMYGPPGTGKTLIGRA 893
++PP+G+L+YGPPG GKTLI +A
Sbjct: 123 LQPPKGVLLYGPPGCGKTLIAKA 145
>AK075223-1|BAC11482.1| 361|Homo sapiens protein ( Homo sapiens
cDNA FLJ90742 fis, clone PLACE1011181, weakly similar to
MSP1 PROTEIN HOMOLOG. ).
Length = 361
Score = 42.3 bits (95), Expect = 0.002
Identities = 15/23 (65%), Positives = 21/23 (91%)
Frame = +3
Query: 825 VKPPRGILMYGPPGTGKTLIGRA 893
++PP+G+L+YGPPG GKTLI +A
Sbjct: 123 LQPPKGVLLYGPPGCGKTLIAKA 145
>AF030356-1|AAB99758.1| 1283|Homo sapiens peroxisome biogenesis gene
1 protein.
Length = 1283
Score = 42.3 bits (95), Expect = 0.002
Identities = 16/30 (53%), Positives = 23/30 (76%)
Frame = +3
Query: 795 RHPSLFKAIGVKPPRGILMYGPPGTGKTLI 884
++P LF + ++ GIL+YGPPGTGKTL+
Sbjct: 861 KYPELFANLPIRQRTGILLYGPPGTGKTLL 890
>AF026086-1|AAB87880.1| 1283|Homo sapiens peroxisome biogenesis
disorder protein 1 protein.
Length = 1283
Score = 42.3 bits (95), Expect = 0.002
Identities = 16/30 (53%), Positives = 23/30 (76%)
Frame = +3
Query: 795 RHPSLFKAIGVKPPRGILMYGPPGTGKTLI 884
++P LF + ++ GIL+YGPPGTGKTL+
Sbjct: 861 KYPELFANLPIRQRTGILLYGPPGTGKTLL 890
>AC000064-1|AAB46346.1| 541|Homo sapiens WUGSC:H_RG083M05.1
protein.
Length = 541
Score = 42.3 bits (95), Expect = 0.002
Identities = 16/30 (53%), Positives = 23/30 (76%)
Frame = +3
Query: 795 RHPSLFKAIGVKPPRGILMYGPPGTGKTLI 884
++P LF + ++ GIL+YGPPGTGKTL+
Sbjct: 174 KYPELFANLPIRQRTGILLYGPPGTGKTLL 203
>AB052092-1|BAB59063.1| 1283|Homo sapiens Pex1pG843D protein.
Length = 1283
Score = 42.3 bits (95), Expect = 0.002
Identities = 16/30 (53%), Positives = 23/30 (76%)
Frame = +3
Query: 795 RHPSLFKAIGVKPPRGILMYGPPGTGKTLI 884
++P LF + ++ GIL+YGPPGTGKTL+
Sbjct: 861 KYPELFANLPIRQRTGILLYGPPGTGKTLL 890
>AB052091-1|BAB59062.1| 1283|Homo sapiens Pex1pL664P protein.
Length = 1283
Score = 42.3 bits (95), Expect = 0.002
Identities = 16/30 (53%), Positives = 23/30 (76%)
Frame = +3
Query: 795 RHPSLFKAIGVKPPRGILMYGPPGTGKTLI 884
++P LF + ++ GIL+YGPPGTGKTL+
Sbjct: 861 KYPELFANLPIRQRTGILLYGPPGTGKTLL 890
>AB052090-1|BAB59061.1| 1226|Homo sapiens Pex1p-634del690 protein.
Length = 1226
Score = 42.3 bits (95), Expect = 0.002
Identities = 16/30 (53%), Positives = 23/30 (76%)
Frame = +3
Query: 795 RHPSLFKAIGVKPPRGILMYGPPGTGKTLI 884
++P LF + ++ GIL+YGPPGTGKTL+
Sbjct: 804 KYPELFANLPIRQRTGILLYGPPGTGKTLL 833
>AB008112-1|BAA85162.1| 1283|Homo sapiens PEX1 protein.
Length = 1283
Score = 42.3 bits (95), Expect = 0.002
Identities = 16/30 (53%), Positives = 23/30 (76%)
Frame = +3
Query: 795 RHPSLFKAIGVKPPRGILMYGPPGTGKTLI 884
++P LF + ++ GIL+YGPPGTGKTL+
Sbjct: 861 KYPELFANLPIRQRTGILLYGPPGTGKTLL 890
>BC000981-1|AAH00981.1| 753|Homo sapiens spermatogenesis associated
5-like 1 protein.
Length = 753
Score = 41.9 bits (94), Expect = 0.003
Identities = 17/34 (50%), Positives = 24/34 (70%)
Frame = +3
Query: 792 LRHPSLFKAIGVKPPRGILMYGPPGTGKTLIGRA 893
LR+P A+G+ PRG+L+ GPPG GKT + +A
Sbjct: 220 LRYPRALTALGLAVPRGVLLAGPPGVGKTQLVQA 253
Score = 39.5 bits (88), Expect = 0.016
Identities = 16/34 (47%), Positives = 23/34 (67%)
Frame = +3
Query: 792 LRHPSLFKAIGVKPPRGILMYGPPGTGKTLIGRA 893
L+ P F +G+ P+G+L+YGPPG KT + RA
Sbjct: 484 LKFPWEFVRMGLTQPKGVLLYGPPGCAKTTLVRA 517
>AK023232-1|BAB14482.1| 620|Homo sapiens protein ( Homo sapiens
cDNA FLJ13170 fis, clone NT2RP3003809, weakly similar to
SAV PROTEIN. ).
Length = 620
Score = 41.9 bits (94), Expect = 0.003
Identities = 17/34 (50%), Positives = 24/34 (70%)
Frame = +3
Query: 792 LRHPSLFKAIGVKPPRGILMYGPPGTGKTLIGRA 893
LR+P A+G+ PRG+L+ GPPG GKT + +A
Sbjct: 220 LRYPRALTALGLAVPRGVLLAGPPGVGKTQLVQA 253
Score = 39.5 bits (88), Expect = 0.016
Identities = 16/34 (47%), Positives = 23/34 (67%)
Frame = +3
Query: 792 LRHPSLFKAIGVKPPRGILMYGPPGTGKTLIGRA 893
L+ P F +G+ P+G+L+YGPPG KT + RA
Sbjct: 484 LKFPWEFVRMGLTQPKGVLLYGPPGCAKTTLVRA 517
>AK022348-1|BAB14017.1| 392|Homo sapiens protein ( Homo sapiens
cDNA FLJ12286 fis, clone MAMMA1001768, weakly similar to
CELL DIVISION CYCLE PROTEIN 48 HOMOLOG MJ1156. ).
Length = 392
Score = 41.9 bits (94), Expect = 0.003
Identities = 17/34 (50%), Positives = 24/34 (70%)
Frame = +3
Query: 792 LRHPSLFKAIGVKPPRGILMYGPPGTGKTLIGRA 893
LR+P A+G+ PRG+L+ GPPG GKT + +A
Sbjct: 220 LRYPRALTALGLAVPRGVLLAGPPGVGKTQLVQA 253
>BX276089-3|CAI16433.1| 280|Homo sapiens katanin p60
(ATPase-containing) subunit A 1 protein.
Length = 280
Score = 41.1 bits (92), Expect = 0.005
Identities = 18/31 (58%), Positives = 23/31 (74%)
Frame = +3
Query: 801 PSLFKAIGVKPPRGILMYGPPGTGKTLIGRA 893
P FK I +P +G+LM GPPGTGKTL+ +A
Sbjct: 232 PEFFKGIR-RPWKGVLMVGPPGTGKTLLAKA 261
>BX276089-2|CAI16431.1| 491|Homo sapiens katanin p60
(ATPase-containing) subunit A 1 protein.
Length = 491
Score = 41.1 bits (92), Expect = 0.005
Identities = 18/31 (58%), Positives = 23/31 (74%)
Frame = +3
Query: 801 PSLFKAIGVKPPRGILMYGPPGTGKTLIGRA 893
P FK I +P +G+LM GPPGTGKTL+ +A
Sbjct: 232 PEFFKGIR-RPWKGVLMVGPPGTGKTLLAKA 261
>BC030613-1|AAH30613.1| 744|Homo sapiens N-ethylmaleimide-sensitive
factor protein.
Length = 744
Score = 41.1 bits (92), Expect = 0.005
Identities = 16/30 (53%), Positives = 22/30 (73%)
Frame = +3
Query: 801 PSLFKAIGVKPPRGILMYGPPGTGKTLIGR 890
P + + +G K +GIL+YGPPG GKTL+ R
Sbjct: 242 PEIVEQMGCKHVKGILLYGPPGCGKTLLAR 271
>AL078581-3|CAI19506.1| 280|Homo sapiens katanin p60
(ATPase-containing) subunit A 1 protein.
Length = 280
Score = 41.1 bits (92), Expect = 0.005
Identities = 18/31 (58%), Positives = 23/31 (74%)
Frame = +3
Query: 801 PSLFKAIGVKPPRGILMYGPPGTGKTLIGRA 893
P FK I +P +G+LM GPPGTGKTL+ +A
Sbjct: 232 PEFFKGIR-RPWKGVLMVGPPGTGKTLLAKA 261
>AL078581-2|CAI19505.1| 491|Homo sapiens katanin p60
(ATPase-containing) subunit A 1 protein.
Length = 491
Score = 41.1 bits (92), Expect = 0.005
Identities = 18/31 (58%), Positives = 23/31 (74%)
Frame = +3
Query: 801 PSLFKAIGVKPPRGILMYGPPGTGKTLIGRA 893
P FK I +P +G+LM GPPGTGKTL+ +A
Sbjct: 232 PEFFKGIR-RPWKGVLMVGPPGTGKTLLAKA 261
>AF056022-1|AAC25114.1| 491|Homo sapiens p60 katanin protein.
Length = 491
Score = 41.1 bits (92), Expect = 0.005
Identities = 18/31 (58%), Positives = 23/31 (74%)
Frame = +3
Query: 801 PSLFKAIGVKPPRGILMYGPPGTGKTLIGRA 893
P FK I +P +G+LM GPPGTGKTL+ +A
Sbjct: 232 PEFFKGIR-RPWKGVLMVGPPGTGKTLLAKA 261
>BC000612-1|AAH00612.1| 490|Homo sapiens katanin p60 subunit A-like
1 protein.
Length = 490
Score = 40.3 bits (90), Expect = 0.009
Identities = 17/31 (54%), Positives = 23/31 (74%)
Frame = +3
Query: 801 PSLFKAIGVKPPRGILMYGPPGTGKTLIGRA 893
P FK I +P +G+LM GPPGTGKT++ +A
Sbjct: 231 PDFFKGIR-RPWKGVLMVGPPGTGKTMLAKA 260
>AL356750-1|CAI13718.1| 490|Homo sapiens katanin p60 subunit A-like
1 protein.
Length = 490
Score = 40.3 bits (90), Expect = 0.009
Identities = 17/31 (54%), Positives = 23/31 (74%)
Frame = +3
Query: 801 PSLFKAIGVKPPRGILMYGPPGTGKTLIGRA 893
P FK I +P +G+LM GPPGTGKT++ +A
Sbjct: 231 PDFFKGIR-RPWKGVLMVGPPGTGKTMLAKA 260
>U56602-1|AAC50655.1| 980|Homo sapiens Pxaaa1p protein.
Length = 980
Score = 38.3 bits (85), Expect = 0.037
Identities = 17/34 (50%), Positives = 26/34 (76%)
Frame = +3
Query: 792 LRHPSLFKAIGVKPPRGILMYGPPGTGKTLIGRA 893
L HP L ++G++ G+L++GPPGTGKTL+ +A
Sbjct: 725 LEHPELL-SLGLRRS-GLLLHGPPGTGKTLLAKA 756
>D83703-1|BAA12069.1| 980|Homo sapiens peroxisome assembly factor-2
protein.
Length = 980
Score = 38.3 bits (85), Expect = 0.037
Identities = 17/34 (50%), Positives = 26/34 (76%)
Frame = +3
Query: 792 LRHPSLFKAIGVKPPRGILMYGPPGTGKTLIGRA 893
L HP L ++G++ G+L++GPPGTGKTL+ +A
Sbjct: 725 LEHPELL-SLGLRRS-GLLLHGPPGTGKTLLAKA 756
>BC150260-1|AAI50261.1| 584|Homo sapiens spastin protein.
Length = 584
Score = 38.3 bits (85), Expect = 0.037
Identities = 15/31 (48%), Positives = 22/31 (70%)
Frame = +3
Query: 801 PSLFKAIGVKPPRGILMYGPPGTGKTLIGRA 893
P LF + P RG+L++GPPG GKT++ +A
Sbjct: 333 PELFTGLRA-PARGLLLFGPPGNGKTMLAKA 362
>BC048331-1|AAH48331.1| 980|Homo sapiens peroxisomal biogenesis
factor 6 protein.
Length = 980
Score = 38.3 bits (85), Expect = 0.037
Identities = 17/34 (50%), Positives = 26/34 (76%)
Frame = +3
Query: 792 LRHPSLFKAIGVKPPRGILMYGPPGTGKTLIGRA 893
L HP L ++G++ G+L++GPPGTGKTL+ +A
Sbjct: 725 LEHPELL-SLGLRRS-GLLLHGPPGTGKTLLAKA 756
>AL158815-3|CAI19463.1| 980|Homo sapiens peroxisomal biogenesis
factor 6 protein.
Length = 980
Score = 38.3 bits (85), Expect = 0.037
Identities = 17/34 (50%), Positives = 26/34 (76%)
Frame = +3
Query: 792 LRHPSLFKAIGVKPPRGILMYGPPGTGKTLIGRA 893
L HP L ++G++ G+L++GPPGTGKTL+ +A
Sbjct: 725 LEHPELL-SLGLRRS-GLLLHGPPGTGKTLLAKA 756
>AJ246003-1|CAB60208.1| 616|Homo sapiens spastin protein protein.
Length = 616
Score = 38.3 bits (85), Expect = 0.037
Identities = 15/31 (48%), Positives = 22/31 (70%)
Frame = +3
Query: 801 PSLFKAIGVKPPRGILMYGPPGTGKTLIGRA 893
P LF + P RG+L++GPPG GKT++ +A
Sbjct: 365 PELFTGLRA-PARGLLLFGPPGNGKTMLAKA 394
>AJ246001-1|CAB60141.1| 616|Homo sapiens spastin protein protein.
Length = 616
Score = 38.3 bits (85), Expect = 0.037
Identities = 15/31 (48%), Positives = 22/31 (70%)
Frame = +3
Query: 801 PSLFKAIGVKPPRGILMYGPPGTGKTLIGRA 893
P LF + P RG+L++GPPG GKT++ +A
Sbjct: 365 PELFTGLRA-PARGLLLFGPPGNGKTMLAKA 394
>AF108098-1|AAF62564.1| 980|Homo sapiens peroxisome assembly
factor-2 protein.
Length = 980
Score = 38.3 bits (85), Expect = 0.037
Identities = 17/34 (50%), Positives = 26/34 (76%)
Frame = +3
Query: 792 LRHPSLFKAIGVKPPRGILMYGPPGTGKTLIGRA 893
L HP L ++G++ G+L++GPPGTGKTL+ +A
Sbjct: 725 LEHPELL-SLGLRRS-GLLLHGPPGTGKTLLAKA 756
>AB208906-1|BAD92143.1| 836|Homo sapiens peroxisomal biogenesis
factor 6 variant protein.
Length = 836
Score = 38.3 bits (85), Expect = 0.037
Identities = 17/34 (50%), Positives = 26/34 (76%)
Frame = +3
Query: 792 LRHPSLFKAIGVKPPRGILMYGPPGTGKTLIGRA 893
L HP L ++G++ G+L++GPPGTGKTL+ +A
Sbjct: 742 LEHPELL-SLGLRRS-GLLLHGPPGTGKTLLAKA 773
>AB051077-1|BAB83047.1| 892|Homo sapiens peroxin Pex6p protein.
Length = 892
Score = 38.3 bits (85), Expect = 0.037
Identities = 17/34 (50%), Positives = 26/34 (76%)
Frame = +3
Query: 792 LRHPSLFKAIGVKPPRGILMYGPPGTGKTLIGRA 893
L HP L ++G++ G+L++GPPGTGKTL+ +A
Sbjct: 637 LEHPELL-SLGLRRS-GLLLHGPPGTGKTLLAKA 668
>AB051076-1|BAB83046.1| 980|Homo sapiens peroxine Pex6p protein.
Length = 980
Score = 38.3 bits (85), Expect = 0.037
Identities = 17/34 (50%), Positives = 26/34 (76%)
Frame = +3
Query: 792 LRHPSLFKAIGVKPPRGILMYGPPGTGKTLIGRA 893
L HP L ++G++ G+L++GPPGTGKTL+ +A
Sbjct: 725 LEHPELL-SLGLRRS-GLLLHGPPGTGKTLLAKA 756
>AB029006-1|BAA83035.1| 584|Homo sapiens KIAA1083 protein protein.
Length = 584
Score = 38.3 bits (85), Expect = 0.037
Identities = 15/31 (48%), Positives = 22/31 (70%)
Frame = +3
Query: 801 PSLFKAIGVKPPRGILMYGPPGTGKTLIGRA 893
P LF + P RG+L++GPPG GKT++ +A
Sbjct: 333 PELFTGLRA-PARGLLLFGPPGNGKTMLAKA 362
>U03985-1|AAA17411.1| 751|Homo sapiens protein ( Human
N-ethylmaleimide-sensitive factor mRNA, partial cds. ).
Length = 751
Score = 37.9 bits (84), Expect = 0.049
Identities = 15/30 (50%), Positives = 21/30 (70%)
Frame = +3
Query: 801 PSLFKAIGVKPPRGILMYGPPGTGKTLIGR 890
P + + +G +GIL+YGPPG GKTL+ R
Sbjct: 249 PEIVEQMGCIHVKGILLYGPPGCGKTLLAR 278
>AF135168-1|AAF70545.1| 744|Homo sapiens N-ethylmaleimide-sensitive
factor protein.
Length = 744
Score = 37.9 bits (84), Expect = 0.049
Identities = 15/30 (50%), Positives = 21/30 (70%)
Frame = +3
Query: 801 PSLFKAIGVKPPRGILMYGPPGTGKTLIGR 890
P + + +G +GIL+YGPPG GKTL+ R
Sbjct: 242 PEIVEQMGCIHVKGILLYGPPGCGKTLLAR 271
>AF102846-1|AAF04745.2| 744|Homo sapiens N-ethylmaleimide-sensitive
factor protein.
Length = 744
Score = 37.9 bits (84), Expect = 0.049
Identities = 15/30 (50%), Positives = 21/30 (70%)
Frame = +3
Query: 801 PSLFKAIGVKPPRGILMYGPPGTGKTLIGR 890
P + + +G +GIL+YGPPG GKTL+ R
Sbjct: 242 PEIVEQMGCIHVKGILLYGPPGCGKTLLAR 271
>BC047932-1|AAH47932.1| 437|Homo sapiens vacuolar protein sorting 4
homolog A (S. cerevisiae) protein.
Length = 437
Score = 36.3 bits (80), Expect = 0.15
Identities = 17/35 (48%), Positives = 25/35 (71%), Gaps = 1/35 (2%)
Frame = +3
Query: 792 LRHPSLFKAIGVKPP-RGILMYGPPGTGKTLIGRA 893
++ P LF G + P RGIL++GPPGTGK+ + +A
Sbjct: 147 IKFPHLFT--GKRTPWRGILLFGPPGTGKSYLAKA 179
>BC039574-1|AAH39574.1| 444|Homo sapiens vacuolar protein sorting 4
homolog B (S. cerevisiae) protein.
Length = 444
Score = 36.3 bits (80), Expect = 0.15
Identities = 17/35 (48%), Positives = 25/35 (71%), Gaps = 1/35 (2%)
Frame = +3
Query: 792 LRHPSLFKAIGVKPP-RGILMYGPPGTGKTLIGRA 893
++ P LF G + P RGIL++GPPGTGK+ + +A
Sbjct: 154 IKFPHLFT--GKRTPWRGILLFGPPGTGKSYLAKA 186
>AY232629-1|AAP59551.1| 444|Homo sapiens cell migration-inducing 1
protein.
Length = 444
Score = 36.3 bits (80), Expect = 0.15
Identities = 17/35 (48%), Positives = 25/35 (71%), Gaps = 1/35 (2%)
Frame = +3
Query: 792 LRHPSLFKAIGVKPP-RGILMYGPPGTGKTLIGRA 893
++ P LF G + P RGIL++GPPGTGK+ + +A
Sbjct: 154 IKFPHLFT--GKRTPWRGILLFGPPGTGKSYLAKA 186
>AK001267-1|BAA91590.1| 639|Homo sapiens protein ( Homo sapiens
cDNA FLJ10405 fis, clone NT2RM4000496, weakly similar to
SAP1 PROTEIN. ).
Length = 639
Score = 36.3 bits (80), Expect = 0.15
Identities = 14/19 (73%), Positives = 17/19 (89%)
Frame = +3
Query: 834 PRGILMYGPPGTGKTLIGR 890
PR IL++GP GTGKTL+GR
Sbjct: 399 PRSILLFGPRGTGKTLLGR 417
>AF282904-1|AAG01471.1| 444|Homo sapiens vacuolar protein sorting
factor 4B protein.
Length = 444
Score = 36.3 bits (80), Expect = 0.15
Identities = 17/35 (48%), Positives = 25/35 (71%), Gaps = 1/35 (2%)
Frame = +3
Query: 792 LRHPSLFKAIGVKPP-RGILMYGPPGTGKTLIGRA 893
++ P LF G + P RGIL++GPPGTGK+ + +A
Sbjct: 154 IKFPHLFT--GKRTPWRGILLFGPPGTGKSYLAKA 186
>AF282903-1|AAG01470.1| 437|Homo sapiens vacuolar protein sorting
factor 4A protein.
Length = 437
Score = 36.3 bits (80), Expect = 0.15
Identities = 17/35 (48%), Positives = 25/35 (71%), Gaps = 1/35 (2%)
Frame = +3
Query: 792 LRHPSLFKAIGVKPP-RGILMYGPPGTGKTLIGRA 893
++ P LF G + P RGIL++GPPGTGK+ + +A
Sbjct: 147 IKFPHLFT--GKRTPWRGILLFGPPGTGKSYLAKA 179
>AF255952-1|AAK52408.1| 437|Homo sapiens vacuolar protein sorting
VPS4-1 protein.
Length = 437
Score = 36.3 bits (80), Expect = 0.15
Identities = 17/35 (48%), Positives = 25/35 (71%), Gaps = 1/35 (2%)
Frame = +3
Query: 792 LRHPSLFKAIGVKPP-RGILMYGPPGTGKTLIGRA 893
++ P LF G + P RGIL++GPPGTGK+ + +A
Sbjct: 147 IKFPHLFT--GKRTPWRGILLFGPPGTGKSYLAKA 179
>AF195514-1|AAG33022.1| 444|Homo sapiens VPS4-2 ATPase protein.
Length = 444
Score = 36.3 bits (80), Expect = 0.15
Identities = 17/35 (48%), Positives = 25/35 (71%), Gaps = 1/35 (2%)
Frame = +3
Query: 792 LRHPSLFKAIGVKPP-RGILMYGPPGTGKTLIGRA 893
++ P LF G + P RGIL++GPPGTGK+ + +A
Sbjct: 154 IKFPHLFT--GKRTPWRGILLFGPPGTGKSYLAKA 186
>AF159063-1|AAD49227.1| 437|Homo sapiens SKD1-homolog protein.
Length = 437
Score = 36.3 bits (80), Expect = 0.15
Identities = 17/35 (48%), Positives = 25/35 (71%), Gaps = 1/35 (2%)
Frame = +3
Query: 792 LRHPSLFKAIGVKPP-RGILMYGPPGTGKTLIGRA 893
++ P LF G + P RGIL++GPPGTGK+ + +A
Sbjct: 147 IKFPHLFT--GKRTPWRGILLFGPPGTGKSYLAKA 179
>AF155740-1|AAD42971.1| 432|Homo sapiens vacuolar sorting protein 4
protein.
Length = 432
Score = 36.3 bits (80), Expect = 0.15
Identities = 17/35 (48%), Positives = 25/35 (71%), Gaps = 1/35 (2%)
Frame = +3
Query: 792 LRHPSLFKAIGVKPP-RGILMYGPPGTGKTLIGRA 893
++ P LF G + P RGIL++GPPGTGK+ + +A
Sbjct: 142 IKFPHLFT--GKRTPWRGILLFGPPGTGKSYLAKA 174
>AF112215-1|AAF17203.1| 437|Homo sapiens SKD1 protein protein.
Length = 437
Score = 36.3 bits (80), Expect = 0.15
Identities = 17/35 (48%), Positives = 25/35 (71%), Gaps = 1/35 (2%)
Frame = +3
Query: 792 LRHPSLFKAIGVKPP-RGILMYGPPGTGKTLIGRA 893
++ P LF G + P RGIL++GPPGTGK+ + +A
Sbjct: 147 IKFPHLFT--GKRTPWRGILLFGPPGTGKSYLAKA 179
>AC093727-1|AAX81992.1| 639|Homo sapiens unknown protein.
Length = 639
Score = 36.3 bits (80), Expect = 0.15
Identities = 14/19 (73%), Positives = 17/19 (89%)
Frame = +3
Query: 834 PRGILMYGPPGTGKTLIGR 890
PR IL++GP GTGKTL+GR
Sbjct: 399 PRSILLFGPRGTGKTLLGR 417
>BX276089-1|CAI16432.1| 311|Homo sapiens katanin p60
(ATPase-containing) subunit A 1 protein.
Length = 311
Score = 35.5 bits (78), Expect = 0.26
Identities = 13/19 (68%), Positives = 17/19 (89%)
Frame = +3
Query: 837 RGILMYGPPGTGKTLIGRA 893
+G+LM GPPGTGKTL+ +A
Sbjct: 167 KGVLMVGPPGTGKTLLAKA 185
>BC063607-1|AAH63607.1| 586|Homo sapiens ATAD3A protein protein.
Length = 586
Score = 35.5 bits (78), Expect = 0.26
Identities = 14/18 (77%), Positives = 15/18 (83%)
Frame = +3
Query: 837 RGILMYGPPGTGKTLIGR 890
R ILMYGPPGTGKTL +
Sbjct: 346 RNILMYGPPGTGKTLFAK 363
>BC050428-1|AAH50428.1| 311|Homo sapiens KATNA1 protein protein.
Length = 311
Score = 35.5 bits (78), Expect = 0.26
Identities = 13/19 (68%), Positives = 17/19 (89%)
Frame = +3
Query: 837 RGILMYGPPGTGKTLIGRA 893
+G+LM GPPGTGKTL+ +A
Sbjct: 167 KGVLMVGPPGTGKTLLAKA 185
>BC033109-1|AAH33109.1| 586|Homo sapiens ATAD3A protein protein.
Length = 586
Score = 35.5 bits (78), Expect = 0.26
Identities = 14/18 (77%), Positives = 15/18 (83%)
Frame = +3
Query: 837 RGILMYGPPGTGKTLIGR 890
R ILMYGPPGTGKTL +
Sbjct: 346 RNILMYGPPGTGKTLFAK 363
>BC014101-1|AAH14101.1| 586|Homo sapiens ATAD3A protein protein.
Length = 586
Score = 35.5 bits (78), Expect = 0.26
Identities = 14/18 (77%), Positives = 15/18 (83%)
Frame = +3
Query: 837 RGILMYGPPGTGKTLIGR 890
R ILMYGPPGTGKTL +
Sbjct: 346 RNILMYGPPGTGKTLFAK 363
>BC011814-1|AAH11814.1| 586|Homo sapiens ATAD3A protein protein.
Length = 586
Score = 35.5 bits (78), Expect = 0.26
Identities = 14/18 (77%), Positives = 15/18 (83%)
Frame = +3
Query: 837 RGILMYGPPGTGKTLIGR 890
R ILMYGPPGTGKTL +
Sbjct: 346 RNILMYGPPGTGKTLFAK 363
>BC007803-1|AAH07803.1| 586|Homo sapiens ATAD3A protein protein.
Length = 586
Score = 35.5 bits (78), Expect = 0.26
Identities = 14/18 (77%), Positives = 15/18 (83%)
Frame = +3
Query: 837 RGILMYGPPGTGKTLIGR 890
R ILMYGPPGTGKTL +
Sbjct: 346 RNILMYGPPGTGKTLFAK 363
>AL645728-11|CAI22954.1| 634|Homo sapiens ATPase family, AAA domain
containing 3A protein.
Length = 634
Score = 35.5 bits (78), Expect = 0.26
Identities = 14/18 (77%), Positives = 15/18 (83%)
Frame = +3
Query: 837 RGILMYGPPGTGKTLIGR 890
R ILMYGPPGTGKTL +
Sbjct: 394 RNILMYGPPGTGKTLFAK 411
>AL645728-10|CAI22955.1| 586|Homo sapiens ATPase family, AAA domain
containing 3A protein.
Length = 586
Score = 35.5 bits (78), Expect = 0.26
Identities = 14/18 (77%), Positives = 15/18 (83%)
Frame = +3
Query: 837 RGILMYGPPGTGKTLIGR 890
R ILMYGPPGTGKTL +
Sbjct: 346 RNILMYGPPGTGKTLFAK 363
>AL645728-9|CAI22953.1| 571|Homo sapiens ATPase family, AAA domain
containing 3A protein.
Length = 571
Score = 35.5 bits (78), Expect = 0.26
Identities = 14/18 (77%), Positives = 15/18 (83%)
Frame = +3
Query: 837 RGILMYGPPGTGKTLIGR 890
R ILMYGPPGTGKTL +
Sbjct: 331 RNILMYGPPGTGKTLFAK 348
>AL078581-1|CAI19504.1| 311|Homo sapiens katanin p60
(ATPase-containing) subunit A 1 protein.
Length = 311
Score = 35.5 bits (78), Expect = 0.26
Identities = 13/19 (68%), Positives = 17/19 (89%)
Frame = +3
Query: 837 RGILMYGPPGTGKTLIGRA 893
+G+LM GPPGTGKTL+ +A
Sbjct: 167 KGVLMVGPPGTGKTLLAKA 185
>AK091144-1|BAC03595.1| 634|Homo sapiens protein ( Homo sapiens
cDNA FLJ33825 fis, clone CTONG2003375, moderately
similar to Drosophila melanogaster AAA family protein
Bor (bor) mRNA. ).
Length = 634
Score = 35.5 bits (78), Expect = 0.26
Identities = 14/18 (77%), Positives = 15/18 (83%)
Frame = +3
Query: 837 RGILMYGPPGTGKTLIGR 890
R ILMYGPPGTGKTL +
Sbjct: 394 RNILMYGPPGTGKTLFAK 411
>AK001571-1|BAA91764.1| 586|Homo sapiens protein ( Homo sapiens
cDNA FLJ10709 fis, clone NT2RP3000869. ).
Length = 586
Score = 35.5 bits (78), Expect = 0.26
Identities = 14/18 (77%), Positives = 15/18 (83%)
Frame = +3
Query: 837 RGILMYGPPGTGKTLIGR 890
R ILMYGPPGTGKTL +
Sbjct: 346 RNILMYGPPGTGKTLFAK 363
>Z98742-4|CAI95645.1| 481|Homo sapiens lactation elevated 1
protein.
Length = 481
Score = 33.9 bits (74), Expect = 0.80
Identities = 12/19 (63%), Positives = 16/19 (84%)
Frame = +3
Query: 828 KPPRGILMYGPPGTGKTLI 884
KPPRG+ +YG GTGKT++
Sbjct: 127 KPPRGLYVYGDVGTGKTMV 145
>Z98742-1|CAO03482.1| 160|Homo sapiens lactation elevated 1
protein.
Length = 160
Score = 33.9 bits (74), Expect = 0.80
Identities = 12/19 (63%), Positives = 16/19 (84%)
Frame = +3
Query: 828 KPPRGILMYGPPGTGKTLI 884
KPPRG+ +YG GTGKT++
Sbjct: 94 KPPRGLYVYGDVGTGKTMV 112
>BC018445-1|AAH18445.2| 481|Homo sapiens lactation elevated 1
protein.
Length = 481
Score = 33.9 bits (74), Expect = 0.80
Identities = 12/19 (63%), Positives = 16/19 (84%)
Frame = +3
Query: 828 KPPRGILMYGPPGTGKTLI 884
KPPRG+ +YG GTGKT++
Sbjct: 127 KPPRGLYVYGDVGTGKTMV 145
>AL356121-3|CAI95324.1| 481|Homo sapiens lactation elevated 1
protein.
Length = 481
Score = 33.9 bits (74), Expect = 0.80
Identities = 12/19 (63%), Positives = 16/19 (84%)
Frame = +3
Query: 828 KPPRGILMYGPPGTGKTLI 884
KPPRG+ +YG GTGKT++
Sbjct: 127 KPPRGLYVYGDVGTGKTMV 145
>AL356121-1|CAO03616.1| 160|Homo sapiens lactation elevated 1
protein.
Length = 160
Score = 33.9 bits (74), Expect = 0.80
Identities = 12/19 (63%), Positives = 16/19 (84%)
Frame = +3
Query: 828 KPPRGILMYGPPGTGKTLI 884
KPPRG+ +YG GTGKT++
Sbjct: 94 KPPRGLYVYGDVGTGKTMV 112
>AL353706-3|CAI95698.1| 481|Homo sapiens lactation elevated 1
protein.
Length = 481
Score = 33.9 bits (74), Expect = 0.80
Identities = 12/19 (63%), Positives = 16/19 (84%)
Frame = +3
Query: 828 KPPRGILMYGPPGTGKTLI 884
KPPRG+ +YG GTGKT++
Sbjct: 127 KPPRGLYVYGDVGTGKTMV 145
>AL139106-2|CAI95701.1| 481|Homo sapiens lactation elevated 1
protein.
Length = 481
Score = 33.9 bits (74), Expect = 0.80
Identities = 12/19 (63%), Positives = 16/19 (84%)
Frame = +3
Query: 828 KPPRGILMYGPPGTGKTLI 884
KPPRG+ +YG GTGKT++
Sbjct: 127 KPPRGLYVYGDVGTGKTMV 145
>AF520418-1|AAM74228.1| 481|Homo sapiens lactation elevated 1
protein.
Length = 481
Score = 33.9 bits (74), Expect = 0.80
Identities = 12/19 (63%), Positives = 16/19 (84%)
Frame = +3
Query: 828 KPPRGILMYGPPGTGKTLI 884
KPPRG+ +YG GTGKT++
Sbjct: 127 KPPRGLYVYGDVGTGKTMV 145
>BC018701-1|AAH18701.1| 648|Homo sapiens ATPase family, AAA domain
containing 3B protein.
Length = 648
Score = 33.5 bits (73), Expect = 1.1
Identities = 13/18 (72%), Positives = 15/18 (83%)
Frame = +3
Query: 837 RGILMYGPPGTGKTLIGR 890
R IL+YGPPGTGKTL +
Sbjct: 346 RHILLYGPPGTGKTLFAK 363
>BC002542-1|AAH02542.1| 648|Homo sapiens ATPase family, AAA domain
containing 3B protein.
Length = 648
Score = 33.5 bits (73), Expect = 1.1
Identities = 13/18 (72%), Positives = 15/18 (83%)
Frame = +3
Query: 837 RGILMYGPPGTGKTLIGR 890
R IL+YGPPGTGKTL +
Sbjct: 346 RHILLYGPPGTGKTLFAK 363
>AL391244-1|CAI22656.1| 473|Homo sapiens ATPase family, AAA domain
containing 3C protein.
Length = 473
Score = 33.5 bits (73), Expect = 1.1
Identities = 13/18 (72%), Positives = 15/18 (83%)
Frame = +3
Query: 837 RGILMYGPPGTGKTLIGR 890
R IL+YGPPGTGKTL +
Sbjct: 171 RHILLYGPPGTGKTLFAK 188
>AL157945-2|CAI22068.1| 648|Homo sapiens ATPase family, AAA domain
containing 3B protein.
Length = 648
Score = 33.5 bits (73), Expect = 1.1
Identities = 13/18 (72%), Positives = 15/18 (83%)
Frame = +3
Query: 837 RGILMYGPPGTGKTLIGR 890
R IL+YGPPGTGKTL +
Sbjct: 346 RHILLYGPPGTGKTLFAK 363
>AL157945-1|CAI22067.1| 473|Homo sapiens ATPase family, AAA domain
containing 3C protein.
Length = 473
Score = 33.5 bits (73), Expect = 1.1
Identities = 13/18 (72%), Positives = 15/18 (83%)
Frame = +3
Query: 837 RGILMYGPPGTGKTLIGR 890
R IL+YGPPGTGKTL +
Sbjct: 171 RHILLYGPPGTGKTLFAK 188
>AK024028-1|BAB14787.1| 480|Homo sapiens protein ( Homo sapiens
cDNA FLJ13966 fis, clone Y79AA1001394, weakly similar to
CELL DIVISION PROTEIN FTSH HOMOLOG (EC 3.4.24.-). ).
Length = 480
Score = 33.5 bits (73), Expect = 1.1
Identities = 13/18 (72%), Positives = 15/18 (83%)
Frame = +3
Query: 837 RGILMYGPPGTGKTLIGR 890
R IL+YGPPGTGKTL +
Sbjct: 178 RHILLYGPPGTGKTLFAK 195
>AB033099-1|BAA86587.1| 606|Homo sapiens KIAA1273 protein protein.
Length = 606
Score = 33.5 bits (73), Expect = 1.1
Identities = 13/18 (72%), Positives = 15/18 (83%)
Frame = +3
Query: 837 RGILMYGPPGTGKTLIGR 890
R IL+YGPPGTGKTL +
Sbjct: 304 RHILLYGPPGTGKTLFAK 321
>AF343078-1|AAK38647.1| 578|Homo sapiens TOB3 protein.
Length = 578
Score = 33.1 bits (72), Expect = 1.4
Identities = 13/18 (72%), Positives = 14/18 (77%)
Frame = +3
Query: 837 RGILMYGPPGTGKTLIGR 890
R ILMYGPPG GKTL +
Sbjct: 345 RNILMYGPPGPGKTLFAK 362
>AF132747-1|AAL75948.1| 437|Homo sapiens SKD2 protein protein.
Length = 437
Score = 32.7 bits (71), Expect = 1.8
Identities = 14/34 (41%), Positives = 21/34 (61%)
Frame = +3
Query: 792 LRHPSLFKAIGVKPPRGILMYGPPGTGKTLIGRA 893
++ P LF P G L++GPPGTGK+ + +A
Sbjct: 147 IKFPHLFTG-KTHPGGGYLLFGPPGTGKSYLAKA 179
>BC007500-1|AAH07500.1| 419|Homo sapiens BCS1-like (yeast) protein.
Length = 419
Score = 30.7 bits (66), Expect = 7.5
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = +3
Query: 798 HPSLFKAIGVKPPRGILMYGPPGTGKT 878
+P + G+ RG L+YGPPG GK+
Sbjct: 211 NPKWYTDRGIPYRRGYLLYGPPGCGKS 237
>BC000416-1|AAH00416.1| 419|Homo sapiens BCS1-like (yeast) protein.
Length = 419
Score = 30.7 bits (66), Expect = 7.5
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = +3
Query: 798 HPSLFKAIGVKPPRGILMYGPPGTGKT 878
+P + G+ RG L+YGPPG GK+
Sbjct: 211 NPKWYTDRGIPYRRGYLLYGPPGCGKS 237
>AK223518-1|BAD97238.1| 419|Homo sapiens BCS1-like variant protein.
Length = 419
Score = 30.7 bits (66), Expect = 7.5
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = +3
Query: 798 HPSLFKAIGVKPPRGILMYGPPGTGKT 878
+P + G+ RG L+YGPPG GK+
Sbjct: 211 NPKWYTDRGIPYRRGYLLYGPPGCGKS 237
>AK097044-1|BAC04933.1| 199|Homo sapiens protein ( Homo sapiens
cDNA FLJ39725 fis, clone SMINT2015294, highly similar to
Mus musculus ATP-dependent zinc metalloprotease (Afg3l1)
mRNA. ).
Length = 199
Score = 30.7 bits (66), Expect = 7.5
Identities = 11/18 (61%), Positives = 15/18 (83%)
Frame = +3
Query: 840 GILMYGPPGTGKTLIGRA 893
G ++ GPPGTGKTL+ +A
Sbjct: 100 GAMLTGPPGTGKTLLAKA 117
>AF516670-1|AAN05490.1| 419|Homo sapiens BCS1-like protein protein.
Length = 419
Score = 30.7 bits (66), Expect = 7.5
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = +3
Query: 798 HPSLFKAIGVKPPRGILMYGPPGTGKT 878
+P + G+ RG L+YGPPG GK+
Sbjct: 211 NPKWYTDRGIPYRRGYLLYGPPGCGKS 237
>AF346835-1|AAK29417.1| 419|Homo sapiens BCS1 protein.
Length = 419
Score = 30.7 bits (66), Expect = 7.5
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = +3
Query: 798 HPSLFKAIGVKPPRGILMYGPPGTGKT 878
+P + G+ RG L+YGPPG GK+
Sbjct: 211 NPKWYTDRGIPYRRGYLLYGPPGCGKS 237
>AF038195-1|AAB97365.1| 419|Homo sapiens unknown protein.
Length = 419
Score = 30.7 bits (66), Expect = 7.5
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = +3
Query: 798 HPSLFKAIGVKPPRGILMYGPPGTGKT 878
+P + G+ RG L+YGPPG GK+
Sbjct: 211 NPKWYTDRGIPYRRGYLLYGPPGCGKS 237
>AF026849-1|AAD08638.1| 419|Homo sapiens h-bcs1 protein.
Length = 419
Score = 30.7 bits (66), Expect = 7.5
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = +3
Query: 798 HPSLFKAIGVKPPRGILMYGPPGTGKT 878
+P + G+ RG L+YGPPG GK+
Sbjct: 211 NPKWYTDRGIPYRRGYLLYGPPGCGKS 237
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 128,007,365
Number of Sequences: 237096
Number of extensions: 2726890
Number of successful extensions: 7166
Number of sequences better than 10.0: 171
Number of HSP's better than 10.0 without gapping: 6756
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7166
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11492727354
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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