Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP11_F_D08
(859 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U10402-2|AAA19068.2| 538|Caenorhabditis elegans Atp synthase su... 199 2e-51
AL023815-4|CAF31480.1| 511|Caenorhabditis elegans Hypothetical ... 59 5e-09
AL023815-1|CAA19429.1| 538|Caenorhabditis elegans Hypothetical ... 59 5e-09
U41015-2|AAA82311.1| 491|Caenorhabditis elegans Vacuolar h atpa... 41 0.001
AL023815-3|CAD92384.1| 503|Caenorhabditis elegans Hypothetical ... 39 0.005
AC006708-2|AAF60418.1| 501|Caenorhabditis elegans Temporarily a... 37 0.016
AL033512-1|CAA22076.1| 606|Caenorhabditis elegans Hypothetical ... 32 0.60
U42830-4|AAC48277.1| 487|Caenorhabditis elegans Neuronal igcam ... 29 3.2
U51998-7|AAA96080.2| 769|Caenorhabditis elegans Hypothetical pr... 29 5.6
U41034-2|AAA82379.1| 915|Caenorhabditis elegans Hypothetical pr... 28 9.8
AL132898-6|CAC14409.1| 187|Caenorhabditis elegans Hypothetical ... 28 9.8
AL132898-5|CAC14408.1| 316|Caenorhabditis elegans Hypothetical ... 28 9.8
AC006810-7|AAK84622.2| 333|Caenorhabditis elegans Serpentine re... 28 9.8
>U10402-2|AAA19068.2| 538|Caenorhabditis elegans Atp synthase
subunit protein 2 protein.
Length = 538
Score = 199 bits (486), Expect = 2e-51
Identities = 94/117 (80%), Positives = 105/117 (89%)
Frame = +1
Query: 262 DVQFEDNLPPILNALEVQNRSPRLVLEVAQHLGENTVRTIAMDGTEGLVRGQPVLDSGSP 441
DVQF++NLPPILN LEV RSPRL+LEV+QHLG+N VR IAMDGTEGLVRGQPV D+G P
Sbjct: 81 DVQFDENLPPILNGLEVVGRSPRLILEVSQHLGDNVVRCIAMDGTEGLVRGQPVADTGDP 140
Query: 442 IRIPVGAETLGRIINVIGEPIDERGPIPTDKTAAIHAEAPEFVDMSVQQEILVTGIK 612
I+IPVG ETLGRI+NVIGEPIDERGPI + AAIHAEAPEFV+MSV+QEILVTGIK
Sbjct: 141 IKIPVGPETLGRIMNVIGEPIDERGPIASKNFAAIHAEAPEFVEMSVEQEILVTGIK 197
Score = 53.6 bits (123), Expect = 2e-07
Identities = 28/44 (63%), Positives = 28/44 (63%)
Frame = +2
Query: 611 KVVDLLAPYAXXXXXXXXXXXXXXXTVLIMXLINNVAKAHGGYS 742
KVVDLLAPYA TVLIM LINNVAKAHGGYS
Sbjct: 197 KVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYS 240
Score = 36.3 bits (80), Expect = 0.028
Identities = 18/31 (58%), Positives = 18/31 (58%)
Frame = +3
Query: 744 VFAGVRXXTXEXNDLYHEMXESGCDSPKKXN 836
VFAGV T E NDLYHEM E G K N
Sbjct: 241 VFAGVGERTREGNDLYHEMIEGGVIDLKGKN 271
>AL023815-4|CAF31480.1| 511|Caenorhabditis elegans Hypothetical
protein H28O16.1d protein.
Length = 511
Score = 58.8 bits (136), Expect = 5e-09
Identities = 29/117 (24%), Positives = 61/117 (52%)
Frame = +1
Query: 343 VAQHLGENTVRTIAMDGTEGLVRGQPVLDSGSPIRIPVGAETLGRIINVIGEPIDERGPI 522
+A +L + V + + + G V +G+ + +PVG LGR+++ +G PID +GPI
Sbjct: 63 MAMNLDVDNVGVVVFGNDKVIREGDIVKRTGAIVDVPVGDGLLGRVVDALGNPIDGKGPI 122
Query: 523 PTDKTAAIHAEAPEFVDMSVQQEILVTGIKSRRSARSLCQRRKDXVVWRSWCGQNCI 693
+ + + +AP + +E +VTG+K+ S + + +++ ++ G+ I
Sbjct: 123 ANARRSRVEVKAPGIIPRLSVREPMVTGVKAVDSLVPIGRGQRELIIGDRQTGKTAI 179
>AL023815-1|CAA19429.1| 538|Caenorhabditis elegans Hypothetical
protein H28O16.1a protein.
Length = 538
Score = 58.8 bits (136), Expect = 5e-09
Identities = 29/117 (24%), Positives = 61/117 (52%)
Frame = +1
Query: 343 VAQHLGENTVRTIAMDGTEGLVRGQPVLDSGSPIRIPVGAETLGRIINVIGEPIDERGPI 522
+A +L + V + + + G V +G+ + +PVG LGR+++ +G PID +GPI
Sbjct: 90 MAMNLDVDNVGVVVFGNDKVIREGDIVKRTGAIVDVPVGDGLLGRVVDALGNPIDGKGPI 149
Query: 523 PTDKTAAIHAEAPEFVDMSVQQEILVTGIKSRRSARSLCQRRKDXVVWRSWCGQNCI 693
+ + + +AP + +E +VTG+K+ S + + +++ ++ G+ I
Sbjct: 150 ANARRSRVEVKAPGIIPRLSVREPMVTGVKAVDSLVPIGRGQRELIIGDRQTGKTAI 206
>U41015-2|AAA82311.1| 491|Caenorhabditis elegans Vacuolar h atpase
protein 12 protein.
Length = 491
Score = 41.1 bits (92), Expect = 0.001
Identities = 25/100 (25%), Positives = 47/100 (47%), Gaps = 1/100 (1%)
Frame = +1
Query: 355 LGENTVRTIAMDGTEGLVRGQPVLD-SGSPIRIPVGAETLGRIINVIGEPIDERGPIPTD 531
+ +N +GT G+ + + +G +R PV + LGRI N G+PID+ P+ +
Sbjct: 71 ISKNKAVVQVFEGTSGIDAKNTICEFTGDILRTPVSEDMLGRIFNGSGKPIDKGPPVLAE 130
Query: 532 KTAAIHAEAPEFVDMSVQQEILVTGIKSRRSARSLCQRRK 651
I+ + +E++ TGI + S+ + +K
Sbjct: 131 DFLDINGQPINPWSRIYPEEMIQTGISAIDVMNSIARGQK 170
>AL023815-3|CAD92384.1| 503|Caenorhabditis elegans Hypothetical
protein H28O16.1c protein.
Length = 503
Score = 38.7 bits (86), Expect = 0.005
Identities = 18/69 (26%), Positives = 37/69 (53%)
Frame = +1
Query: 487 VIGEPIDERGPIPTDKTAAIHAEAPEFVDMSVQQEILVTGIKSRRSARSLCQRRKDXVVW 666
V+G PID +GPI + + + +AP + +E +VTG+K+ S + + +++ ++
Sbjct: 103 VLGNPIDGKGPIANARRSRVEVKAPGIIPRLSVREPMVTGVKAVDSLVPIGRGQRELIIG 162
Query: 667 RSWCGQNCI 693
G+ I
Sbjct: 163 DRQTGKTAI 171
>AC006708-2|AAF60418.1| 501|Caenorhabditis elegans Temporarily
assigned gene nameprotein 300 protein.
Length = 501
Score = 37.1 bits (82), Expect = 0.016
Identities = 21/74 (28%), Positives = 37/74 (50%)
Frame = +1
Query: 430 SGSPIRIPVGAETLGRIINVIGEPIDERGPIPTDKTAAIHAEAPEFVDMSVQQEILVTGI 609
+G R PV + LGRI N G+PID+ P+ + I+ + + +E++ TGI
Sbjct: 109 TGDIFRSPVSLDMLGRIFNGSGKPIDKGPPVLPEDYLDINGQPINPFNRIYPEEMIQTGI 168
Query: 610 KSRRSARSLCQRRK 651
+ S+ + +K
Sbjct: 169 SAIDVMNSIARGQK 182
>AL033512-1|CAA22076.1| 606|Caenorhabditis elegans Hypothetical
protein Y49A3A.2 protein.
Length = 606
Score = 31.9 bits (69), Expect = 0.60
Identities = 13/39 (33%), Positives = 22/39 (56%)
Frame = +1
Query: 394 TEGLVRGQPVLDSGSPIRIPVGAETLGRIINVIGEPIDE 510
T G+ G PVL +G P+ + +G +G I + I P+ +
Sbjct: 59 TSGVTIGDPVLRTGKPLSVELGPGIMGSIFDGIQRPLKD 97
>U42830-4|AAC48277.1| 487|Caenorhabditis elegans Neuronal igcam
protein 3 protein.
Length = 487
Score = 29.5 bits (63), Expect = 3.2
Identities = 19/66 (28%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
Frame = +1
Query: 388 DGTEGLVRGQPV-LDSGSPIRIPVGAETLGRIINVIGEPIDERGPIPTDKTAAIHAEAPE 564
D +G + G+P+ +D G ++ P G E + ++ N GEP+DE A I + E
Sbjct: 152 DTVKGALLGEPITIDCG--VKGPSGKEPMIQMTNGNGEPLDEEIWTIAGNEATIDSLKKE 209
Query: 565 FVDMSV 582
+++V
Sbjct: 210 HAELTV 215
>U51998-7|AAA96080.2| 769|Caenorhabditis elegans Hypothetical
protein C12D12.1a protein.
Length = 769
Score = 28.7 bits (61), Expect = 5.6
Identities = 22/80 (27%), Positives = 35/80 (43%), Gaps = 5/80 (6%)
Frame = -3
Query: 611 FIPVTRISCCTDMSTNSGASA*IAAVLSVGMGPRS-SIGSPITL-MMRPRV---SAPTGI 447
F PVT +S + +T + + + P + + +P T+ M P + P
Sbjct: 469 FYPVTTVSTMSPPTTVTVPTTPTPVPTTTNTPPANPTTATPTTVGTMTPSTGTTTVPVPT 528
Query: 446 RIGEPESSTGCPRTKPSVPS 387
G P + T P TKP+VPS
Sbjct: 529 TTGSPTTQTTAPVTKPTVPS 548
>U41034-2|AAA82379.1| 915|Caenorhabditis elegans Hypothetical
protein M02D8.3 protein.
Length = 915
Score = 27.9 bits (59), Expect = 9.8
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = -1
Query: 172 QRFFHILKGISQQLI*RLKCRFQLDLLPPTFSRNQLL 62
+R + +K QL+ + CR + PP+F+RN LL
Sbjct: 499 ERVENAIKENDAQLLYSINCRLRARSEPPSFTRNALL 535
>AL132898-6|CAC14409.1| 187|Caenorhabditis elegans Hypothetical
protein Y59A8B.9 protein.
Length = 187
Score = 27.9 bits (59), Expect = 9.8
Identities = 19/73 (26%), Positives = 27/73 (36%)
Frame = -3
Query: 575 MSTNSGASA*IAAVLSVGMGPRSSIGSPITLMMRPRVSAPTGIRIGEPESSTGCPRTKPS 396
+ T G +A +A M RS P+T M P + P S+ PR
Sbjct: 9 LPTEGGPAAGASAKTPSRMPARSVPQKPVTTMRTPAATPAAPPTRPTPSRSSAAPRATAP 68
Query: 395 VPSMAMVRTVFSP 357
P+ A +T P
Sbjct: 69 TPTAAPPKTCAPP 81
>AL132898-5|CAC14408.1| 316|Caenorhabditis elegans Hypothetical
protein Y59A8B.7 protein.
Length = 316
Score = 27.9 bits (59), Expect = 9.8
Identities = 19/73 (26%), Positives = 27/73 (36%)
Frame = -3
Query: 575 MSTNSGASA*IAAVLSVGMGPRSSIGSPITLMMRPRVSAPTGIRIGEPESSTGCPRTKPS 396
+ T G +A +A M RS P+T M P + P S+ PR
Sbjct: 138 LPTEGGPAAGASAKTPSRMPARSVPQKPVTTMRTPAATPAAPPTRPTPSRSSAAPRATAP 197
Query: 395 VPSMAMVRTVFSP 357
P+ A +T P
Sbjct: 198 TPTAAPPKTCAPP 210
>AC006810-7|AAK84622.2| 333|Caenorhabditis elegans Serpentine
receptor, class t protein40 protein.
Length = 333
Score = 27.9 bits (59), Expect = 9.8
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = -3
Query: 161 PHSERDFSATDLTAKMPLPTRLIAPNIFKK 72
PH+ +FS LT + P R+I N FKK
Sbjct: 199 PHTINNFSVVTLTCIVYTPFRIIIANQFKK 228
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,477,224
Number of Sequences: 27780
Number of extensions: 378839
Number of successful extensions: 952
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 865
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 952
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2139963672
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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