Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP11_F_C23
         (893 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK131425-1|BAD18572.1|  302|Homo sapiens protein ( Homo sapiens ...    32   3.2  
AK126303-1|BAC86520.1|  527|Homo sapiens protein ( Homo sapiens ...    30   9.9  

>AK131425-1|BAD18572.1|  302|Homo sapiens protein ( Homo sapiens
           cDNA FLJ16545 fis, clone OCBBF3004972. ).
          Length = 302

 Score = 31.9 bits (69), Expect = 3.2
 Identities = 16/31 (51%), Positives = 18/31 (58%), Gaps = 5/31 (16%)
 Frame = +2

Query: 89  RKERTSCSPTSFSCYCWSP-----CGCCIPL 166
           R+E  SCSP SF C CW P     CGC  P+
Sbjct: 242 RRESVSCSP-SFWC-CWQPLAFLTCGCAAPI 270


>AK126303-1|BAC86520.1|  527|Homo sapiens protein ( Homo sapiens
           cDNA FLJ44324 fis, clone TRACH3002168, highly  similar
           to Cell surface glycoprotein MUC18 precursor. ).
          Length = 527

 Score = 30.3 bits (65), Expect = 9.9
 Identities = 17/41 (41%), Positives = 21/41 (51%)
 Frame = -2

Query: 199 GLSCLHRSIFKKRNTASTGRPAVTGE*SR*TRGSFLPMPKP 77
           GLS    S   + N+ STG+P +  E     R SFLP P P
Sbjct: 480 GLSTSTASPHTRANSTSTGKPGLARE-QGCARASFLPCPSP 519


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 94,121,483
Number of Sequences: 237096
Number of extensions: 1817050
Number of successful extensions: 7547
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 7286
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7526
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11492727354
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)