Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP11_F_C22
         (883 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              27   0.30 
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    24   1.6  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    24   1.6  
DQ011227-1|AAY63896.1|  484|Apis mellifera Amt-1-like protein pr...    24   2.1  
AF388659-3|AAK71993.1|  548|Apis mellifera 1D-myo-inositol-trisp...    24   2.1  
AF388659-2|AAK71994.1|  463|Apis mellifera 1D-myo-inositol-trisp...    24   2.1  
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    24   2.1  
DQ325083-1|ABD14097.1|  189|Apis mellifera complementary sex det...    23   4.9  
AJ849455-1|CAH60991.1|  366|Apis mellifera twist protein protein.      22   8.6  

>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 26.6 bits (56), Expect = 0.30
 Identities = 13/28 (46%), Positives = 15/28 (53%)
 Frame = -2

Query: 321  NSKTCKHSIRVHQIHSIRSTTTWKARRY 238
            N  TC    R   I SIRS +TW  RR+
Sbjct: 1660 NYNTCDRIKRGTVIRSIRSHSTWDPRRH 1687


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 24.2 bits (50), Expect = 1.6
 Identities = 8/24 (33%), Positives = 16/24 (66%)
 Frame = +3

Query: 372 IKSCKKIFLGKFCTKLSKKL*NKI 443
           I   +++ LG+ C K++K+L N +
Sbjct: 401 ISEVQRVVLGRLCEKVAKQLVNSV 424


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 24.2 bits (50), Expect = 1.6
 Identities = 8/24 (33%), Positives = 16/24 (66%)
 Frame = +3

Query: 372 IKSCKKIFLGKFCTKLSKKL*NKI 443
           I   +++ LG+ C K++K+L N +
Sbjct: 439 ISEVQRVVLGRLCEKVAKQLVNSV 462


>DQ011227-1|AAY63896.1|  484|Apis mellifera Amt-1-like protein
           protein.
          Length = 484

 Score = 23.8 bits (49), Expect = 2.1
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = +2

Query: 62  KYNVGQDPTKLGRDYGVLFGLFVV 133
           +Y+ G DP  LG     + GLFV+
Sbjct: 208 RYDNGIDPLPLGCPVNAIMGLFVL 231


>AF388659-3|AAK71993.1|  548|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
          Length = 548

 Score = 23.8 bits (49), Expect = 2.1
 Identities = 14/41 (34%), Positives = 18/41 (43%)
 Frame = -1

Query: 262 HHLEGQEIQYPHDRWNCQ*Y*EQYWYIFFAKTAFAPQQ*PQ 140
           H + G  + + HD  N        W I FAKT   PQ  P+
Sbjct: 477 HEVVGSSLLFVHDTKNAG-----IWMIDFAKTLPLPQHLPR 512


>AF388659-2|AAK71994.1|  463|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform B protein.
          Length = 463

 Score = 23.8 bits (49), Expect = 2.1
 Identities = 14/41 (34%), Positives = 18/41 (43%)
 Frame = -1

Query: 262 HHLEGQEIQYPHDRWNCQ*Y*EQYWYIFFAKTAFAPQQ*PQ 140
           H + G  + + HD  N        W I FAKT   PQ  P+
Sbjct: 392 HEVVGSSLLFVHDTKNAG-----IWMIDFAKTLPLPQHLPR 427


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 23.8 bits (49), Expect = 2.1
 Identities = 14/41 (34%), Positives = 18/41 (43%)
 Frame = -1

Query: 262 HHLEGQEIQYPHDRWNCQ*Y*EQYWYIFFAKTAFAPQQ*PQ 140
           H + G  + + HD  N        W I FAKT   PQ  P+
Sbjct: 711 HEVVGSSLLFVHDTKNAG-----IWMIDFAKTLPLPQHLPR 746


>DQ325083-1|ABD14097.1|  189|Apis mellifera complementary sex
           determiner protein.
          Length = 189

 Score = 22.6 bits (46), Expect = 4.9
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = -2

Query: 621 INSLTLVNNNKYDYNIGS*Y 562
           +++ T+ NNN Y YN  + Y
Sbjct: 85  LSNKTIHNNNNYKYNYNNKY 104


>AJ849455-1|CAH60991.1|  366|Apis mellifera twist protein protein.
          Length = 366

 Score = 21.8 bits (44), Expect = 8.6
 Identities = 6/15 (40%), Positives = 9/15 (60%)
 Frame = -1

Query: 277 LYTEHHHLEGQEIQY 233
           +Y  HHHL   ++ Y
Sbjct: 69  IYQSHHHLHHHQVLY 83


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 216,931
Number of Sequences: 438
Number of extensions: 4663
Number of successful extensions: 22
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 28644972
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)