Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP11_F_C21
(950 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF098500-2|AAC67399.2| 996|Caenorhabditis elegans Temporarily a... 35 0.022
AF098500-3|ABD94103.1| 774|Caenorhabditis elegans Temporarily a... 35 0.022
U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical pr... 36 0.032
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 34 0.17
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 34 0.17
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 33 0.23
U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical pr... 33 0.30
AF025467-2|AAN65301.1| 505|Caenorhabditis elegans Hypothetical ... 33 0.30
AF025467-1|AAB71039.2| 528|Caenorhabditis elegans Hypothetical ... 33 0.30
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 33 0.40
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 33 0.40
AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical... 33 0.40
AL137227-1|CAB70238.2| 611|Caenorhabditis elegans Hypothetical ... 32 0.69
Z78413-7|CAB01657.1| 352|Caenorhabditis elegans Hypothetical pr... 31 1.2
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 31 1.2
Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical pr... 30 2.1
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 30 2.1
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 30 2.1
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 30 2.1
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 30 2.1
Z93393-1|CAB07688.1| 497|Caenorhabditis elegans Hypothetical pr... 30 2.8
U29096-1|AAA68406.1| 105|Caenorhabditis elegans Neuropeptide-li... 30 2.8
Z79596-2|CAC42251.1| 838|Caenorhabditis elegans Hypothetical pr... 29 3.7
U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (gr... 29 3.7
AF167982-1|AAD50438.1| 838|Caenorhabditis elegans dynamin protein. 29 3.7
AF043700-5|AAB97575.2| 573|Caenorhabditis elegans Lipid deplete... 29 3.7
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 29 3.7
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 29 3.7
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 29 3.7
AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen prot... 29 4.9
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 29 6.5
U40954-8|AAM69083.2| 471|Caenorhabditis elegans Hypothetical pr... 29 6.5
AL132949-22|CAB70112.2| 603|Caenorhabditis elegans Hypothetical... 29 6.5
AF101312-1|AAC69221.3| 813|Caenorhabditis elegans Hypothetical ... 29 6.5
AF000193-3|AAB52890.1| 259|Caenorhabditis elegans Hypothetical ... 29 6.5
Z70309-6|CAA94360.1| 324|Caenorhabditis elegans Hypothetical pr... 28 8.5
>AF098500-2|AAC67399.2| 996|Caenorhabditis elegans Temporarily
assigned gene nameprotein 343, isoform a protein.
Length = 996
Score = 35.1 bits (77), Expect(2) = 0.022
Identities = 23/78 (29%), Positives = 25/78 (32%)
Frame = +3
Query: 627 PXPXXISXPLRSPXPPXRXPDPPPXAP*XRPXXPPXXGXXTSPPXXPFXVPXXXXLXTSX 806
P P +S P P PP PPP P RP P P P +P
Sbjct: 299 PPPLPLSNPPAKPTPP-----PPPPKPTIRPPPIPASPPPRPPASEPVGIPLYSEKQHQQ 353
Query: 807 XLFXXPXXSPXXPPXTPP 860
L SP PP P
Sbjct: 354 QLRPTTAVSPPKPPSFAP 371
Score = 20.6 bits (41), Expect(2) = 0.022
Identities = 7/13 (53%), Positives = 8/13 (61%)
Frame = +3
Query: 516 PXGXPPLPXPXVP 554
P PPLP P +P
Sbjct: 291 PTESPPLPPPPLP 303
>AF098500-3|ABD94103.1| 774|Caenorhabditis elegans Temporarily
assigned gene nameprotein 343, isoform b protein.
Length = 774
Score = 35.1 bits (77), Expect(2) = 0.022
Identities = 23/78 (29%), Positives = 25/78 (32%)
Frame = +3
Query: 627 PXPXXISXPLRSPXPPXRXPDPPPXAP*XRPXXPPXXGXXTSPPXXPFXVPXXXXLXTSX 806
P P +S P P PP PPP P RP P P P +P
Sbjct: 77 PPPLPLSNPPAKPTPP-----PPPPKPTIRPPPIPASPPPRPPASEPVGIPLYSEKQHQQ 131
Query: 807 XLFXXPXXSPXXPPXTPP 860
L SP PP P
Sbjct: 132 QLRPTTAVSPPKPPSFAP 149
Score = 20.6 bits (41), Expect(2) = 0.022
Identities = 7/13 (53%), Positives = 8/13 (61%)
Frame = +3
Query: 516 PXGXPPLPXPXVP 554
P PPLP P +P
Sbjct: 69 PTESPPLPPPPLP 81
>U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical
protein C34D4.11 protein.
Length = 136
Score = 36.3 bits (80), Expect = 0.032
Identities = 20/49 (40%), Positives = 21/49 (42%)
Frame = -3
Query: 756 GGXWXRRXREGXGGGXRXRGEXGPXXGXGXRVSGVGXKXGXGXGXGGXG 610
GG W G GGG G G G G R G G + G G G GG G
Sbjct: 78 GGNWGGNGGGGNGGG----GRGGGGGGGGGRGGGGGGRGGGGGGGGGRG 122
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 33.9 bits (74), Expect = 0.17
Identities = 41/160 (25%), Positives = 43/160 (26%), Gaps = 7/160 (4%)
Frame = -2
Query: 946 GGGGXRSIEXVACXXXXXXXXRNXGGXXAGGVXGGXXGXW--XG*XKRXXXVXRXXXXGT 773
GGGG C GG GG GG G G G
Sbjct: 135 GGGGCGGGSSGGCGGGSSGGCGGGGGGGCGGGGGGGCGGGSSGGGGYAVAPSGGGGCGGG 194
Query: 772 XKGXXGGXVXXPXXGGXXGRX*GAXGGG--SGXRXGGXGERSGXEMXXG---XGXGXXXX 608
GG P GG G + GGG S GG SG G G
Sbjct: 195 GSSGGGGYAVAPSGGGGCGGGGSSGGGGYASAPSGGGGYATSGGGGSGGYATGGSSGGGY 254
Query: 607 XXXXXXXXGXPTXGGXXRGTXGXGRGGXPXGXXXDTGXXG 488
G T GG G G GG G +G G
Sbjct: 255 SSGGSSGGGYSTGGGGGYAGGGGGGGGSSGGYAGSSGGGG 294
Score = 32.3 bits (70), Expect = 0.52
Identities = 37/145 (25%), Positives = 39/145 (26%), Gaps = 1/145 (0%)
Frame = -2
Query: 946 GGGGXRSIEXVACXXXXXXXXRNXGGXXAGGVXGGXXGXWXG*XKRXXXVXRXXXXGTXK 767
GGGG C GG GG GG G G G
Sbjct: 112 GGGGGCGGGGGGCGGGGGGCGGGGGGGCGGGSSGGCGGGSSG------GCGGGGGGGCGG 165
Query: 766 GXXGGXVXXPXXGGXXGRX*GAXGG-GSGXRXGGXGERSGXEMXXGXGXGXXXXXXXXXX 590
G GG GG GG G G GG G G G G
Sbjct: 166 GGGGGCGGGSSGGGGYAVAPSGGGGCGGGGSSGGGGYAVAPSGGGGCGGG---GSSGGGG 222
Query: 589 XXGXPTXGGXXRGTXGXGRGGXPXG 515
P+ GG + G G GG G
Sbjct: 223 YASAPSGGGGYATSGGGGSGGYATG 247
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 33.9 bits (74), Expect = 0.17
Identities = 41/160 (25%), Positives = 43/160 (26%), Gaps = 7/160 (4%)
Frame = -2
Query: 946 GGGGXRSIEXVACXXXXXXXXRNXGGXXAGGVXGGXXGXW--XG*XKRXXXVXRXXXXGT 773
GGGG C GG GG GG G G G
Sbjct: 135 GGGGCGGGSSGGCGGGSSGGCGGGGGGGCGGGGGGGCGGGSSGGGGYAVAPSGGGGCGGG 194
Query: 772 XKGXXGGXVXXPXXGGXXGRX*GAXGGG--SGXRXGGXGERSGXEMXXG---XGXGXXXX 608
GG P GG G + GGG S GG SG G G
Sbjct: 195 GSSGGGGYAVAPSGGGGCGGGGSSGGGGYASAPSGGGGYATSGGGGSGGYATGGSSGGGY 254
Query: 607 XXXXXXXXGXPTXGGXXRGTXGXGRGGXPXGXXXDTGXXG 488
G T GG G G GG G +G G
Sbjct: 255 SSGGSSGGGYSTGGGGGYAGGGGGGGGSSGGYAGSSGGGG 294
Score = 32.3 bits (70), Expect = 0.52
Identities = 37/145 (25%), Positives = 39/145 (26%), Gaps = 1/145 (0%)
Frame = -2
Query: 946 GGGGXRSIEXVACXXXXXXXXRNXGGXXAGGVXGGXXGXWXG*XKRXXXVXRXXXXGTXK 767
GGGG C GG GG GG G G G
Sbjct: 112 GGGGGCGGGGGGCGGGGGGCGGGGGGGCGGGSSGGCGGGSSG------GCGGGGGGGCGG 165
Query: 766 GXXGGXVXXPXXGGXXGRX*GAXGG-GSGXRXGGXGERSGXEMXXGXGXGXXXXXXXXXX 590
G GG GG GG G G GG G G G G
Sbjct: 166 GGGGGCGGGSSGGGGYAVAPSGGGGCGGGGSSGGGGYAVAPSGGGGCGGG---GSSGGGG 222
Query: 589 XXGXPTXGGXXRGTXGXGRGGXPXG 515
P+ GG + G G GG G
Sbjct: 223 YASAPSGGGGYATSGGGGSGGYATG 247
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 33.5 bits (73), Expect = 0.23
Identities = 26/99 (26%), Positives = 31/99 (31%), Gaps = 3/99 (3%)
Frame = +3
Query: 660 SPXPPXRXPDPPPXAP*XRPXXPPXXGXXT---SPPXXPFXVPXXXXLXTSXXLFXXPXX 830
SP PP P PPP + P PP T +P P VP LF
Sbjct: 1335 SPSPPPPPPPPPPPSDDLTPVPPPPPPPPTMSKAPTGVPLPVP------PPPPLFSPSMI 1388
Query: 831 SPXXPPXTPPAXXXXXXXXXXXXXXXHATXSMDRXPPPP 947
P PP P + + +DR P P
Sbjct: 1389 LPPPPPPLPSEEKKNPLPTANNGHTDNGSDDIDRNVPTP 1427
>U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical
protein C50F7.5 protein.
Length = 309
Score = 33.1 bits (72), Expect = 0.30
Identities = 15/35 (42%), Positives = 15/35 (42%)
Frame = +3
Query: 627 PXPXXISXPLRSPXPPXRXPDPPPXAP*XRPXXPP 731
P P P P PP R P PP P RP PP
Sbjct: 238 PSPSDPPGPPGPPGPPTRRPPGPPGPPTRRPPGPP 272
>AF025467-2|AAN65301.1| 505|Caenorhabditis elegans Hypothetical
protein R148.5b protein.
Length = 505
Score = 33.1 bits (72), Expect = 0.30
Identities = 18/46 (39%), Positives = 19/46 (41%), Gaps = 4/46 (8%)
Frame = +2
Query: 632 PXPHFX----PTPLTRSPXPXXGPXSPRXLXPPPXPSLXRRXHXPP 757
P PHF P P P P G PR PPP P + R PP
Sbjct: 307 PPPHFMGRGMPPPFM-PPPPHFGMGPPRGFMPPPHPMMFRGGPYPP 351
>AF025467-1|AAB71039.2| 528|Caenorhabditis elegans Hypothetical
protein R148.5a protein.
Length = 528
Score = 33.1 bits (72), Expect = 0.30
Identities = 18/46 (39%), Positives = 19/46 (41%), Gaps = 4/46 (8%)
Frame = +2
Query: 632 PXPHFX----PTPLTRSPXPXXGPXSPRXLXPPPXPSLXRRXHXPP 757
P PHF P P P P G PR PPP P + R PP
Sbjct: 307 PPPHFMGRGMPPPFM-PPPPHFGMGPPRGFMPPPHPMMFRGGPYPP 351
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 32.7 bits (71), Expect = 0.40
Identities = 28/111 (25%), Positives = 32/111 (28%), Gaps = 4/111 (3%)
Frame = +3
Query: 627 PXPXXISXPLRSPXPPXRX----PDPPPXAP*XRPXXPPXXGXXTSPPXXPFXVPXXXXL 794
P P P+ P PP P PPP + P PP G PP P P
Sbjct: 264 PPPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPP----- 318
Query: 795 XTSXXLFXXPXXSPXXPPXTPPAXXXXXXXXXXXXXXXHATXSMDRXPPPP 947
F P PP PP + + PPPP
Sbjct: 319 PPPPSRFGPPGMGGMPPP--PPPGMRYPGGMPPPPPPRYPSAGPGMYPPPP 367
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 32.7 bits (71), Expect = 0.40
Identities = 28/111 (25%), Positives = 32/111 (28%), Gaps = 4/111 (3%)
Frame = +3
Query: 627 PXPXXISXPLRSPXPPXRX----PDPPPXAP*XRPXXPPXXGXXTSPPXXPFXVPXXXXL 794
P P P+ P PP P PPP + P PP G PP P P
Sbjct: 274 PPPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPP----- 328
Query: 795 XTSXXLFXXPXXSPXXPPXTPPAXXXXXXXXXXXXXXXHATXSMDRXPPPP 947
F P PP PP + + PPPP
Sbjct: 329 PPPPSRFGPPGMGGMPPP--PPPGMRYPGGMPPPPPPRYPSAGPGMYPPPP 377
>AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical
protein Y43F8C.20 protein.
Length = 193
Score = 32.7 bits (71), Expect = 0.40
Identities = 26/90 (28%), Positives = 27/90 (30%), Gaps = 5/90 (5%)
Frame = -2
Query: 874 GGXXAGGVXGGXXGXWXG*XKR-----XXXVXRXXXXGTXKGXXGGXVXXPXXGGXXGRX 710
GG GG GG G W G G G GG GG
Sbjct: 89 GGNGGGGRGGGGRGDWGGNNNGGGGNWGGGGNNDGGWGGNNGGGGGGRGGGGRGGDGRGP 148
Query: 709 *GAXGGGSGXRXGGXGERSGXEMXXGXGXG 620
G+ GGG GG G G G G G
Sbjct: 149 PGSNGGGDWGGNGGGGRGGGGGRGGGGGGG 178
>AL137227-1|CAB70238.2| 611|Caenorhabditis elegans Hypothetical
protein F58D5.1 protein.
Length = 611
Score = 31.9 bits (69), Expect = 0.69
Identities = 22/79 (27%), Positives = 26/79 (32%), Gaps = 1/79 (1%)
Frame = -2
Query: 718 GRX*GAXGGGSGXRXGGXGERSGXEMXXGXGXGXXXXXXXXXXXXGXPTXGGXXRGTXGX 539
GR G GGG+G G+R G + G G GG G G
Sbjct: 459 GRGFGGAGGGAGNHGQRGGQRGGGQWGGNAGPGGYYPNHFNNGYDMPMPWGGGYGGDMGY 518
Query: 538 GR-GGXPXGXXXDTGXXGE 485
G GG G G G+
Sbjct: 519 GAYGGGYGGGYGGPGAYGD 537
>Z78413-7|CAB01657.1| 352|Caenorhabditis elegans Hypothetical
protein T01C3.7 protein.
Length = 352
Score = 31.1 bits (67), Expect = 1.2
Identities = 24/71 (33%), Positives = 25/71 (35%), Gaps = 1/71 (1%)
Frame = -2
Query: 697 GGGSGXRXGGXGERSGXEMXXGXGXGXXXXXXXXXXXXGXPTXGGXXRGTXGXGRGGXPX 518
GGG G R G G+R G G G G G GG G G RGG
Sbjct: 10 GGGGGFRGGRGGDRGGSRGGFG-GGGRGGYGGGDRGSFGGGDRGGFRGGRGGGDRGGFRG 68
Query: 517 G-XXXDTGXXG 488
G D G G
Sbjct: 69 GRGGGDRGGFG 79
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 31.1 bits (67), Expect = 1.2
Identities = 17/47 (36%), Positives = 17/47 (36%), Gaps = 3/47 (6%)
Frame = +3
Query: 627 PXPXXISXPLRSPXPPXRXPD---PPPXAP*XRPXXPPXXGXXTSPP 758
P P PL P PP P PPP P P PP PP
Sbjct: 34 PPPMCAPPPLPCPPPPICPPQFCPPPPMCPPPPPPPPPPMCPPPPPP 80
>Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical
protein F15B9.4 protein.
Length = 1140
Score = 30.3 bits (65), Expect = 2.1
Identities = 18/68 (26%), Positives = 21/68 (30%)
Frame = +3
Query: 660 SPXPPXRXPDPPPXAP*XRPXXPPXXGXXTSPPXXPFXVPXXXXLXTSXXLFXXPXXSPX 839
+P PP P P PP G P P +P L P P
Sbjct: 519 APPPPPMPGMAPLSTGAPTPPPPPPVGMANGGPPPPPPLPLDLLKGAVAGLKSVPGGPPP 578
Query: 840 XPPXTPPA 863
PP PP+
Sbjct: 579 PPPPPPPS 586
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 30.3 bits (65), Expect = 2.1
Identities = 19/49 (38%), Positives = 23/49 (46%), Gaps = 2/49 (4%)
Frame = +3
Query: 627 PXPXXI--SXPLRSPXPPXRXPDPPPXAP*XRPXXPPXXGXXTSPPXXP 767
P P + + P RSP PP R P PP +P RP P +PP P
Sbjct: 141 PPPPRVPRTPPPRSP-PPRRPPMTPP-SPQRRPPRTPPSPEPRNPPRTP 187
Score = 28.3 bits (60), Expect = 8.5
Identities = 22/72 (30%), Positives = 24/72 (33%), Gaps = 5/72 (6%)
Frame = +3
Query: 663 PXPPXRXP-----DPPPXAP*XRPXXPPXXGXXTSPPXXPFXVPXXXXLXTSXXLFXXPX 827
P PP R PPP P P PP + PP P P P
Sbjct: 124 PPPPPRKSRAGGSSPPPPPPPRVPRTPPPR---SPPPRRPPMTPPSPQRRPPRT---PPS 177
Query: 828 XSPXXPPXTPPA 863
P PP TPP+
Sbjct: 178 PEPRNPPRTPPS 189
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 30.3 bits (65), Expect = 2.1
Identities = 22/82 (26%), Positives = 24/82 (29%)
Frame = +3
Query: 522 GXPPLPXPXVPRXXXXXXXXXXXXXXXXXXXXXXXPXPXXISXPLRSPXPPXRXPDPPPX 701
G PP P P +P P P P+ PP P PPP
Sbjct: 711 GGPP-PPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPP---PPPPPG 766
Query: 702 AP*XRPXXPPXXGXXTSPPXXP 767
P PP G PP P
Sbjct: 767 GCPPPPPPPPPGGFKGGPPPPP 788
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 30.3 bits (65), Expect = 2.1
Identities = 22/82 (26%), Positives = 24/82 (29%)
Frame = +3
Query: 522 GXPPLPXPXVPRXXXXXXXXXXXXXXXXXXXXXXXPXPXXISXPLRSPXPPXRXPDPPPX 701
G PP P P +P P P P+ PP P PPP
Sbjct: 711 GGPP-PPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPP---PPPPPG 766
Query: 702 AP*XRPXXPPXXGXXTSPPXXP 767
P PP G PP P
Sbjct: 767 GCPPPPPPPPPGGFKGGPPPPP 788
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 30.3 bits (65), Expect = 2.1
Identities = 22/82 (26%), Positives = 24/82 (29%)
Frame = +3
Query: 522 GXPPLPXPXVPRXXXXXXXXXXXXXXXXXXXXXXXPXPXXISXPLRSPXPPXRXPDPPPX 701
G PP P P +P P P P+ PP P PPP
Sbjct: 294 GGPP-PPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPP---PPPPPG 349
Query: 702 AP*XRPXXPPXXGXXTSPPXXP 767
P PP G PP P
Sbjct: 350 GCPPPPPPPPPGGFKGGPPPPP 371
>Z93393-1|CAB07688.1| 497|Caenorhabditis elegans Hypothetical
protein Y48E1B.1 protein.
Length = 497
Score = 29.9 bits (64), Expect = 2.8
Identities = 12/25 (48%), Positives = 12/25 (48%)
Frame = +3
Query: 633 PXXISXPLRSPXPPXRXPDPPPXAP 707
P IS P P PP P PPP P
Sbjct: 349 PPIISPPAPPPPPPPPPPPPPPQTP 373
>U29096-1|AAA68406.1| 105|Caenorhabditis elegans Neuropeptide-like
protein protein32 protein.
Length = 105
Score = 29.9 bits (64), Expect = 2.8
Identities = 20/48 (41%), Positives = 21/48 (43%)
Frame = -3
Query: 753 GXWXRRXREGXGGGXRXRGEXGPXXGXGXRVSGVGXKXGXGXGXGGXG 610
G W R G GGG RG G G G R G G + G G G G G
Sbjct: 56 GGWGGRGGWGRGGG---RGYGGRGGGWGGRGGGWG-RGGGGRGFYGGG 99
>Z79596-2|CAC42251.1| 838|Caenorhabditis elegans Hypothetical
protein C02C6.1b protein.
Length = 838
Score = 29.5 bits (63), Expect = 3.7
Identities = 14/41 (34%), Positives = 16/41 (39%)
Frame = +3
Query: 657 RSPXPPXRXPDPPPXAP*XRPXXPPXXGXXTSPPXXPFXVP 779
++P PP P PP P P G PP P VP
Sbjct: 778 QAPMPPRGGPGAPPPPGMRPPPGAPGGGGGMYPPLIPTRVP 818
>U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (grd
related) protein 6 protein.
Length = 240
Score = 29.5 bits (63), Expect = 3.7
Identities = 12/26 (46%), Positives = 13/26 (50%)
Frame = +3
Query: 651 PLRSPXPPXRXPDPPPXAP*XRPXXP 728
P+ P PP P PPP P RP P
Sbjct: 69 PICPPPPPPPMPCPPPPPPMPRPSCP 94
>AF167982-1|AAD50438.1| 838|Caenorhabditis elegans dynamin protein.
Length = 838
Score = 29.5 bits (63), Expect = 3.7
Identities = 14/41 (34%), Positives = 16/41 (39%)
Frame = +3
Query: 657 RSPXPPXRXPDPPPXAP*XRPXXPPXXGXXTSPPXXPFXVP 779
++P PP P PP P P G PP P VP
Sbjct: 778 QAPMPPRGGPGAPPPPGMRPPPGAPGGGGGMYPPLIPTRVP 818
>AF043700-5|AAB97575.2| 573|Caenorhabditis elegans Lipid depleted
protein 6 protein.
Length = 573
Score = 29.5 bits (63), Expect = 3.7
Identities = 17/43 (39%), Positives = 19/43 (44%)
Frame = -2
Query: 778 GTXKGXXGGXVXXPXXGGXXGRX*GAXGGGSGXRXGGXGERSG 650
G +G GG GG G G GGG G R G G+R G
Sbjct: 525 GGFRGGFGGRGGGGFRGGDRGGFRGR-GGGGGFRGGRGGDRGG 566
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 29.5 bits (63), Expect = 3.7
Identities = 27/104 (25%), Positives = 29/104 (27%), Gaps = 5/104 (4%)
Frame = +3
Query: 651 PLRSPXPPXRXPDPPPXAP*XRPXXPPXXGXXT-----SPPXXPFXVPXXXXLXTSXXLF 815
P SP PP PP A P PP G SPP P P S
Sbjct: 233 PAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGS---- 288
Query: 816 XXPXXSPXXPPXTPPAXXXXXXXXXXXXXXXHATXSMDRXPPPP 947
P + PP PP + PPPP
Sbjct: 289 PPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPP 332
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 29.5 bits (63), Expect = 3.7
Identities = 27/104 (25%), Positives = 29/104 (27%), Gaps = 5/104 (4%)
Frame = +3
Query: 651 PLRSPXPPXRXPDPPPXAP*XRPXXPPXXGXXT-----SPPXXPFXVPXXXXLXTSXXLF 815
P SP PP PP A P PP G SPP P P S
Sbjct: 254 PAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGS---- 309
Query: 816 XXPXXSPXXPPXTPPAXXXXXXXXXXXXXXXHATXSMDRXPPPP 947
P + PP PP + PPPP
Sbjct: 310 PPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPP 353
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 29.5 bits (63), Expect = 3.7
Identities = 27/104 (25%), Positives = 29/104 (27%), Gaps = 5/104 (4%)
Frame = +3
Query: 651 PLRSPXPPXRXPDPPPXAP*XRPXXPPXXGXXT-----SPPXXPFXVPXXXXLXTSXXLF 815
P SP PP PP A P PP G SPP P P S
Sbjct: 239 PAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGS---- 294
Query: 816 XXPXXSPXXPPXTPPAXXXXXXXXXXXXXXXHATXSMDRXPPPP 947
P + PP PP + PPPP
Sbjct: 295 PPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPP 338
>AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen protein
51 protein.
Length = 435
Score = 29.1 bits (62), Expect = 4.9
Identities = 21/79 (26%), Positives = 22/79 (27%)
Frame = -3
Query: 846 GGXXGXGGXEXRGXEXXXEXEXXXRRKXXXGGXWXRRXREGXGGGXRXRGEXGPXXGXGX 667
GG GG G + GG G GGG G G G
Sbjct: 290 GGPGQPGGPGQDGGPGTDAAYCPCPPRTPAGGGGGGDFPAGGGGGGYSTGGGGGRADSGG 349
Query: 666 RVSGVGXKXGXGXGXGGXG 610
G G G G GG G
Sbjct: 350 AAGGAGGAGGYSGGGGGGG 368
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 28.7 bits (61), Expect = 6.5
Identities = 27/97 (27%), Positives = 28/97 (28%)
Frame = -2
Query: 946 GGGGXRSIEXVACXXXXXXXXRNXGGXXAGGVXGGXXGXWXG*XKRXXXVXRXXXXGTXK 767
GGG AC GG GG GG G G G
Sbjct: 106 GGGCAPPPPPPACGGGCGGGGGGCGGGCGGGGGGGCGGGGGG---------GCGGGGGGC 156
Query: 766 GXXGGXVXXPXXGGXXGRX*GAXGGGSGXRXGGXGER 656
G GG G G G GGG G GG G +
Sbjct: 157 GGGGGGCGGGGGGCGGGGGGGCGGGGGGGCGGGCGRK 193
>U40954-8|AAM69083.2| 471|Caenorhabditis elegans Hypothetical
protein ZK813.5 protein.
Length = 471
Score = 28.7 bits (61), Expect = 6.5
Identities = 16/43 (37%), Positives = 23/43 (53%)
Frame = -3
Query: 249 HXXFNXIRPFSIXTIILFVSLLFILQLFMNTEPCFDTKMSRNK 121
H + +R + TI+ FVS+ F +FMN P TK RN+
Sbjct: 141 HKYLSGLRITGVSTILSFVSISFASAVFMNVIP---TKPFRNR 180
>AL132949-22|CAB70112.2| 603|Caenorhabditis elegans Hypothetical
protein Y53F4B.25 protein.
Length = 603
Score = 28.7 bits (61), Expect = 6.5
Identities = 16/40 (40%), Positives = 17/40 (42%)
Frame = +3
Query: 660 SPXPPXRXPDPPPXAP*XRPXXPPXXGXXTSPPXXPFXVP 779
+P PP R P PP AP P PP P P VP
Sbjct: 445 NPTPPPRLPQ-PPTAP---PTVPPPPNQAPIVPHQPMYVP 480
>AF101312-1|AAC69221.3| 813|Caenorhabditis elegans Hypothetical
protein F56E10.2 protein.
Length = 813
Score = 28.7 bits (61), Expect = 6.5
Identities = 15/34 (44%), Positives = 15/34 (44%), Gaps = 1/34 (2%)
Frame = +3
Query: 660 SPXPPXRXPDP-PPXAP*XRPXXPPXXGXXTSPP 758
SP P P PP P P PP G TSPP
Sbjct: 312 SPSDPCPSPPLLPPVCPPAPPPPPPPIGGLTSPP 345
>AF000193-3|AAB52890.1| 259|Caenorhabditis elegans Hypothetical
protein T20B6.3 protein.
Length = 259
Score = 28.7 bits (61), Expect = 6.5
Identities = 18/49 (36%), Positives = 20/49 (40%)
Frame = -3
Query: 756 GGXWXRRXREGXGGGXRXRGEXGPXXGXGXRVSGVGXKXGXGXGXGGXG 610
GG + G GGG G G G G G+G G G G GG G
Sbjct: 159 GGDFGGYGGGGMGGGGYGGGGDGGYGGGGFGGGGMGG-YGGGMGGGGYG 206
>Z70309-6|CAA94360.1| 324|Caenorhabditis elegans Hypothetical
protein R102.6 protein.
Length = 324
Score = 28.3 bits (60), Expect = 8.5
Identities = 13/35 (37%), Positives = 13/35 (37%)
Frame = +3
Query: 654 LRSPXPPXRXPDPPPXAP*XRPXXPPXXGXXTSPP 758
L P P P PPP P P PP PP
Sbjct: 242 LPPPPSPVCMPPPPPPCPMPIPCPPPPPACSCPPP 276
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,631,385
Number of Sequences: 27780
Number of extensions: 203506
Number of successful extensions: 1384
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 680
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1099
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2465154230
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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