Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP11_F_C18
         (876 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_06_0008 - 9533424-9533475,9533526-9535344,9535599-9536364,955...    27   1.9  
01_06_1678 - 39095986-39096205,39096400-39096477,39096578-390969...    27   2.0  
04_01_0197 + 2323790-2324098,2324145-2324774                           27   2.1  
01_07_0206 + 41990251-41992032,41992131-41992361                       30   2.1  
02_01_0148 - 1051121-1051192,1051378-1051512,1052343-1052396,105...    28   8.5  
01_06_1724 - 39452858-39454309                                         28   8.5  

>10_06_0008 -
           9533424-9533475,9533526-9535344,9535599-9536364,
           9551969-9552097
          Length = 921

 Score = 27.1 bits (57), Expect(2) = 1.9
 Identities = 9/15 (60%), Positives = 10/15 (66%)
 Frame = +2

Query: 824 NXNXMGHPXPPPPXP 868
           N N  G+P PPPP P
Sbjct: 331 NHNHQGNPPPPPPPP 345



 Score = 21.8 bits (44), Expect(2) = 1.9
 Identities = 7/10 (70%), Positives = 7/10 (70%)
 Frame = +2

Query: 845 PXPPPPXPXT 874
           P PPPP P T
Sbjct: 343 PPPPPPPPDT 352


>01_06_1678 -
           39095986-39096205,39096400-39096477,39096578-39096949,
           39097374-39097671,39097867-39098077,39098331-39099023
          Length = 623

 Score = 27.5 bits (58), Expect(2) = 2.0
 Identities = 10/25 (40%), Positives = 13/25 (52%)
 Frame = +1

Query: 793 PSXXPGSXIPQX*XHGPPXPPPAXP 867
           P+    S +P+   H PP PPP  P
Sbjct: 68  PAPPTPSPVPEHLHHHPPPPPPVPP 92



 Score = 21.4 bits (43), Expect(2) = 2.0
 Identities = 7/11 (63%), Positives = 7/11 (63%)
 Frame = +1

Query: 841 PPXPPPAXPXD 873
           PP PPP  P D
Sbjct: 120 PPPPPPHPPED 130


>04_01_0197 + 2323790-2324098,2324145-2324774
          Length = 312

 Score = 27.1 bits (57), Expect(2) = 2.1
 Identities = 9/15 (60%), Positives = 10/15 (66%)
 Frame = +2

Query: 824 NXNXMGHPXPPPPXP 868
           N N  G+P PPPP P
Sbjct: 20  NHNHQGNPPPPPPPP 34



 Score = 21.8 bits (44), Expect(2) = 2.1
 Identities = 7/10 (70%), Positives = 7/10 (70%)
 Frame = +2

Query: 845 PXPPPPXPXT 874
           P PPPP P T
Sbjct: 34  PPPPPPPPDT 43


>01_07_0206 + 41990251-41992032,41992131-41992361
          Length = 670

 Score = 30.3 bits (65), Expect = 2.1
 Identities = 20/72 (27%), Positives = 37/72 (51%), Gaps = 6/72 (8%)
 Frame = +2

Query: 146 YWEYE-EGYPISGHFSKRHPRDVTWDKQVGG-----GKVFGTLGQNDDGLFGKAGYNREI 307
           +++++ EG P+    S+R  R   W++Q+GG      +++G     D  L     +NR+ 
Sbjct: 215 FYQFDGEGKPMEDFDSERSRRACLWERQIGGRGDDVNELYGPSSCKD--LLTLYNFNRQY 272

Query: 308 FNDDRGKLTGQA 343
            N D+  L+ QA
Sbjct: 273 VNMDKTWLSKQA 284


>02_01_0148 -
           1051121-1051192,1051378-1051512,1052343-1052396,
           1052501-1052581,1052667-1052826,1053346-1053453,
           1053543-1053718,1053952-1054002,1054154-1054264,
           1054493-1054547,1055667-1055789,1055922-1056007,
           1056235-1056349,1056429-1056667
          Length = 521

 Score = 28.3 bits (60), Expect = 8.5
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = -3

Query: 178 ANWISFFVLPINFCVDTHQDRGEEI 104
           A W  F  LP  + +D H DR E++
Sbjct: 69  ALWAHFHRLPARYALDVHADRAEDV 93


>01_06_1724 - 39452858-39454309
          Length = 483

 Score = 28.3 bits (60), Expect = 8.5
 Identities = 10/29 (34%), Positives = 14/29 (48%)
 Frame = +2

Query: 782 IPYXHPXYLVXQYPNXNXMGHPXPPPPXP 868
           +P  HP  +  Q P    + +  PPPP P
Sbjct: 334 VPGQHPPCIAYQMPPPPCLAYQMPPPPPP 362


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,934,746
Number of Sequences: 37544
Number of extensions: 438300
Number of successful extensions: 1770
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1511
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1725
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2467979640
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)