Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP11_F_C15
(868 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 38 0.002
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 37 0.004
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 33 0.053
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 33 0.070
SPAC1B2.02c |ugo1||mitochondrial fusion and transport protein Ug... 31 0.16
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 31 0.21
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 31 0.28
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 27 2.6
SPCC962.06c |bpb1|sf1|zinc finger protein Bpb1|Schizosaccharomyc... 26 8.0
SPBC21D10.12 |hob1||BAR adaptor protein Hob1|Schizosaccharomyces... 26 8.0
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 37.5 bits (83), Expect = 0.002
Identities = 17/48 (35%), Positives = 17/48 (35%)
Frame = +3
Query: 711 PPXPXPXXXPXXXPPPXPAXPXXXGGXXPPPXXXPPXXXXXPXPXPPP 854
PP P P P P P P PPP PP P PPP
Sbjct: 733 PPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPP 780
Score = 37.1 bits (82), Expect = 0.003
Identities = 18/51 (35%), Positives = 18/51 (35%), Gaps = 1/51 (1%)
Frame = +3
Query: 669 PXXPXXPXXXPXXXP-PXPXPXXXPXXXPPPXPAXPXXXGGXXPPPXXXPP 818
P P P P P P P P PP P P G PPP PP
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPP 782
Score = 35.1 bits (77), Expect = 0.013
Identities = 14/36 (38%), Positives = 14/36 (38%)
Frame = +1
Query: 709 PPXXPXPPXPPXXXXPPXPXXPXXXXAXXPPPXXPP 816
P P PP P PP P P PPP PP
Sbjct: 746 PAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPP 781
Score = 34.7 bits (76), Expect = 0.017
Identities = 16/49 (32%), Positives = 16/49 (32%)
Frame = +1
Query: 709 PPXXPXPPXPPXXXXPPXPXXPXXXXAXXPPPXXPPXXXXXXPXPXPPP 855
PP P P P P P PPP PP P PPP
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPP 780
Score = 33.9 bits (74), Expect = 0.030
Identities = 16/50 (32%), Positives = 16/50 (32%)
Frame = +2
Query: 704 PXPPXXPXXPXPXXXXXPXXRXPPXXXXPXXPPXXXPPXXXXXPPXPPPP 853
P PP P P P P P PP PP PPPP
Sbjct: 733 PPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPP 782
Score = 33.5 bits (73), Expect = 0.040
Identities = 18/52 (34%), Positives = 18/52 (34%)
Frame = +3
Query: 699 PXXXPPXPXPXXXPXXXPPPXPAXPXXXGGXXPPPXXXPPXXXXXPXPXPPP 854
P P P P P P PA P G PPP P P PPP
Sbjct: 733 PPPPPAVIVPTPAPAPIPVPPPA-PIMGGPPPPPPPPGVAGAGPPPPPPPPP 783
Score = 29.9 bits (64), Expect = 0.49
Identities = 17/55 (30%), Positives = 17/55 (30%)
Frame = +2
Query: 686 PPXPXXPXPPXXPXXPXPXXXXXPXXRXPPXXXXPXXPPXXXPPXXXXXPPXPPP 850
PP P P P P P PP P PP PP PPP
Sbjct: 733 PPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPP----PPPPPP 783
Score = 26.6 bits (56), Expect = 4.6
Identities = 12/39 (30%), Positives = 12/39 (30%)
Frame = +1
Query: 658 PXXXPXXXXXPXXXXXXPPXXPXPPXPPXXXXPPXPXXP 774
P P P PP P PP PP P P
Sbjct: 744 PAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPP 782
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 36.7 bits (81), Expect = 0.004
Identities = 18/51 (35%), Positives = 18/51 (35%), Gaps = 3/51 (5%)
Frame = +2
Query: 710 PPXXPXXPXPXXXXXPXXRXPPXXXXPXXPPXXXPPXXXXXPPXP---PPP 853
PP P P P P PP P P PP PP P PPP
Sbjct: 124 PPSAPAPPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPP 174
Score = 33.1 bits (72), Expect = 0.053
Identities = 16/48 (33%), Positives = 17/48 (35%), Gaps = 1/48 (2%)
Frame = +3
Query: 711 PPXPXPXXXPXXXPPPXPAXPXXXGGXXPP-PXXXPPXXXXXPXPXPP 851
PP P P PP P+ P PP P PP P P P
Sbjct: 130 PPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQP 177
Score = 29.1 bits (62), Expect = 0.86
Identities = 16/61 (26%), Positives = 16/61 (26%)
Frame = +3
Query: 669 PXXPXXPXXXPXXXPPXPXPXXXPXXXPPPXPAXPXXXGGXXPPPXXXPPXXXXXPXPXP 848
P P P PP P P P A P P PP P P
Sbjct: 125 PSAPAPPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSP 184
Query: 849 P 851
P
Sbjct: 185 P 185
Score = 28.3 bits (60), Expect = 1.5
Identities = 18/58 (31%), Positives = 18/58 (31%), Gaps = 2/58 (3%)
Frame = +2
Query: 686 PPXPXXPXPPXXPXXPXPXXXXXPXXRXPPXXXXPXXP--PXXXPPXXXXXPPXPPPP 853
PP P P P P P P P P P PP P PPPP
Sbjct: 151 PPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSAPSLPSAVPPMP---PKVPPPP 205
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 33.1 bits (72), Expect = 0.053
Identities = 19/52 (36%), Positives = 19/52 (36%), Gaps = 2/52 (3%)
Frame = -1
Query: 817 GGXXXGGGXXPPXXXGXAGXGGGXXXGXXXG--XGXGGXXXGXXXGXXGXXG 668
GG G G PP G G GG G G G GG G G G G
Sbjct: 191 GGFGGGSGGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGG 242
Score = 28.3 bits (60), Expect = 1.5
Identities = 20/63 (31%), Positives = 20/63 (31%), Gaps = 1/63 (1%)
Frame = -1
Query: 853 GGGXGXGXXXXXGGXXXGG-GXXPPXXXGXAGXGGGXXXGXXXGXGXGGXXXGXXXGXXG 677
GGG G G GG G G G GGG G GG G G G
Sbjct: 194 GGGSGGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGGGPGGFGGGLGG 253
Query: 676 XXG 668
G
Sbjct: 254 FGG 256
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 32.7 bits (71), Expect = 0.070
Identities = 17/55 (30%), Positives = 18/55 (32%)
Frame = +1
Query: 688 PXXXXXXPPXXPXPPXPPXXXXPPXPXXPXXXXAXXPPPXXPPXXXXXXPXPXPP 852
P PP P PP P P P + PPP PP P PP
Sbjct: 1683 PAHPVSTPPVRPQSAAPPQMSAPTPPPPP---MSVPPPPSAPPMPAGPPSAPPPP 1734
Score = 28.3 bits (60), Expect = 1.5
Identities = 16/58 (27%), Positives = 17/58 (29%), Gaps = 2/58 (3%)
Frame = +2
Query: 686 PPXPXXPXPPXXPXXPXPXXXXXPXXRXPPXXXXPXXPPXXXPPXXXXXP--PXPPPP 853
PP P PP P P P + P P PP P P PP
Sbjct: 1478 PPAPVSQLPPAVPNVPVPSMIPSVAQQPPSSVAPATAPSSTLPPSQSSFAHVPSPAPP 1535
Score = 28.3 bits (60), Expect = 1.5
Identities = 14/46 (30%), Positives = 14/46 (30%)
Frame = +3
Query: 678 PXXPXXXPXXXPPXPXPXXXPXXXPPPXPAXPXXXGGXXPPPXXXP 815
P P P P P PPP A P G PP P
Sbjct: 1691 PVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLP 1736
Score = 28.3 bits (60), Expect = 1.5
Identities = 16/48 (33%), Positives = 16/48 (33%), Gaps = 3/48 (6%)
Frame = +1
Query: 709 PPXXPXP-PXPPXXXXPPXPXXPXXXXA--XXPPPXXPPXXXXXXPXP 843
PP P P PP PP P P PPP P P P
Sbjct: 1699 PPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLPASSAPSVPNP 1746
Score = 28.3 bits (60), Expect = 1.5
Identities = 12/33 (36%), Positives = 12/33 (36%)
Frame = +3
Query: 669 PXXPXXPXXXPXXXPPXPXPXXXPXXXPPPXPA 767
P P P P P P P PPP PA
Sbjct: 1705 PTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLPA 1737
Score = 27.9 bits (59), Expect = 2.0
Identities = 13/43 (30%), Positives = 13/43 (30%)
Frame = +2
Query: 686 PPXPXXPXPPXXPXXPXPXXXXXPXXRXPPXXXXPXXPPXXXP 814
PP P PP P P P PP P P P
Sbjct: 1699 PPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLPASSAP 1741
>SPAC1B2.02c |ugo1||mitochondrial fusion and transport protein
Ugo1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 421
Score = 31.5 bits (68), Expect = 0.16
Identities = 14/36 (38%), Positives = 22/36 (61%)
Frame = -1
Query: 283 AIAGPALINPSRTLRPTFSIFLKSFHLGSGAALTAP 176
AIA P +I+P ++RP S+F+KS A + +P
Sbjct: 202 AIADPNIISPIDSVRPLLSLFIKSITSAISALILSP 237
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 31.1 bits (67), Expect = 0.21
Identities = 18/60 (30%), Positives = 18/60 (30%)
Frame = +3
Query: 669 PXXPXXPXXXPXXXPPXPXPXXXPXXXPPPXPAXPXXXGGXXPPPXXXPPXXXXXPXPXP 848
P P P PP P P PPP A P PP P P P P
Sbjct: 1184 PAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLPPVPV-PTAKAPPVPAP 1242
Score = 30.7 bits (66), Expect = 0.28
Identities = 16/46 (34%), Positives = 16/46 (34%)
Frame = +3
Query: 711 PPXPXPXXXPXXXPPPXPAXPXXXGGXXPPPXXXPPXXXXXPXPXP 848
PP P P PPP A P PP PP P P P
Sbjct: 1179 PPVPKPAAGVPPVPPPSEAPPVPKPSVGVPP--VPPPSTAPPVPTP 1222
Score = 30.3 bits (65), Expect = 0.37
Identities = 16/58 (27%), Positives = 16/58 (27%)
Frame = +3
Query: 669 PXXPXXPXXXPXXXPPXPXPXXXPXXXPPPXPAXPXXXGGXXPPPXXXPPXXXXXPXP 842
P P P PP P P P P A P PP P P P
Sbjct: 1107 PSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKP 1164
Score = 29.9 bits (64), Expect = 0.49
Identities = 21/69 (30%), Positives = 21/69 (30%), Gaps = 7/69 (10%)
Frame = +3
Query: 669 PXXPXXPXXXPXXXPPXPXPXXXPXXXPPP---XPAXPXXXGG--XXPPPXXXP--PXXX 827
P P P PP P P P P P P G PPP P P
Sbjct: 1145 PSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPS 1204
Query: 828 XXPXPXPPP 854
P PPP
Sbjct: 1205 VGVPPVPPP 1213
Score = 29.1 bits (62), Expect = 0.86
Identities = 17/55 (30%), Positives = 17/55 (30%)
Frame = +3
Query: 687 PXXXPXXXPPXPXPXXXPXXXPPPXPAXPXXXGGXXPPPXXXPPXXXXXPXPXPP 851
P P PP P PPP PA P P P PP P P
Sbjct: 1042 PVPIPTSTPPVPKSSSGAPSAPPPVPA-PSSEIPSIPAPSGAPPVPAPSGIPPVP 1095
Score = 29.1 bits (62), Expect = 0.86
Identities = 17/60 (28%), Positives = 17/60 (28%)
Frame = +3
Query: 669 PXXPXXPXXXPXXXPPXPXPXXXPXXXPPPXPAXPXXXGGXXPPPXXXPPXXXXXPXPXP 848
P P P PP P P P P A P PP P P P P
Sbjct: 1126 PSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPP-VPAPSSGIPPVPKP 1184
Score = 29.1 bits (62), Expect = 0.86
Identities = 14/47 (29%), Positives = 14/47 (29%)
Frame = +1
Query: 712 PXXPXPPXPPXXXXPPXPXXPXXXXAXXPPPXXPPXXXXXXPXPXPP 852
P PP PP PP P PP PP P P
Sbjct: 1184 PAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLPPVP 1230
Score = 28.3 bits (60), Expect = 1.5
Identities = 14/48 (29%), Positives = 14/48 (29%)
Frame = +3
Query: 699 PXXXPPXPXPXXXPXXXPPPXPAXPXXXGGXXPPPXXXPPXXXXXPXP 842
P PP P P P P A P PP P P P
Sbjct: 1079 PSGAPPVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKP 1126
Score = 28.3 bits (60), Expect = 1.5
Identities = 16/54 (29%), Positives = 16/54 (29%)
Frame = +3
Query: 687 PXXXPXXXPPXPXPXXXPXXXPPPXPAXPXXXGGXXPPPXXXPPXXXXXPXPXP 848
P P PP P P P P A P PP P P P P
Sbjct: 1084 PVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAPP-VPKPSVAAPPVPVP 1136
Score = 27.9 bits (59), Expect = 2.0
Identities = 17/60 (28%), Positives = 17/60 (28%)
Frame = +3
Query: 669 PXXPXXPXXXPXXXPPXPXPXXXPXXXPPPXPAXPXXXGGXXPPPXXXPPXXXXXPXPXP 848
P P P PP P P P P A P PP P P P P
Sbjct: 1050 PPVPKSSSGAPSAPPPVPAPSSEIPSIPAPSGAPPVPAPSGIPP--VPKPSVAAPPVPKP 1107
Score = 27.9 bits (59), Expect = 2.0
Identities = 15/49 (30%), Positives = 15/49 (30%), Gaps = 1/49 (2%)
Frame = +1
Query: 712 PXXPXPPXP-PXXXXPPXPXXPXXXXAXXPPPXXPPXXXXXXPXPXPPP 855
P PP P P PP P PP PP P PP
Sbjct: 1164 PSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPP 1212
Score = 27.1 bits (57), Expect = 3.5
Identities = 14/48 (29%), Positives = 14/48 (29%)
Frame = +3
Query: 711 PPXPXPXXXPXXXPPPXPAXPXXXGGXXPPPXXXPPXXXXXPXPXPPP 854
PP P P P P A P PP P P P P
Sbjct: 1022 PPVPLPSADAPPIPVPSTAPPVPIPTSTPPVPKSSSGAPSAPPPVPAP 1069
Score = 26.2 bits (55), Expect = 6.0
Identities = 13/44 (29%), Positives = 13/44 (29%)
Frame = +3
Query: 711 PPXPXPXXXPXXXPPPXPAXPXXXGGXXPPPXXXPPXXXXXPXP 842
PP P P P P A P PP P P P
Sbjct: 1102 PPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKP 1145
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 30.7 bits (66), Expect = 0.28
Identities = 15/49 (30%), Positives = 15/49 (30%)
Frame = +1
Query: 709 PPXXPXPPXPPXXXXPPXPXXPXXXXAXXPPPXXPPXXXXXXPXPXPPP 855
P PP PP P A PPP PP P PP
Sbjct: 224 PTSTSAPPIPPSIPSSRPPERVPSLSAPAPPPIPPPSNGTVSSPPNSPP 272
Score = 30.3 bits (65), Expect = 0.37
Identities = 17/60 (28%), Positives = 17/60 (28%), Gaps = 1/60 (1%)
Frame = +3
Query: 678 PXXPXXXPXXXPPX-PXPXXXPXXXPPPXPAXPXXXGGXXPPPXXXPPXXXXXPXPXPPP 854
P P P PP P PP P P G P P P P P P
Sbjct: 425 PSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPAPPPAPAPAP 484
Score = 28.3 bits (60), Expect = 1.5
Identities = 13/44 (29%), Positives = 14/44 (31%)
Frame = +1
Query: 721 PXPPXPPXXXXPPXPXXPXXXXAXXPPPXXPPXXXXXXPXPXPP 852
P PP P P + PPP PP P PP
Sbjct: 312 PPPPPPSRRNRGKPPIGNGSSNSSLPPPPPPPRSNAAGSIPLPP 355
Score = 27.1 bits (57), Expect = 3.5
Identities = 17/58 (29%), Positives = 17/58 (29%), Gaps = 2/58 (3%)
Frame = +1
Query: 688 PXXXXXXPPXXPX--PPXPPXXXXPPXPXXPXXXXAXXPPPXXPPXXXXXXPXPXPPP 855
P PP P P PP P P P P PP P P P P
Sbjct: 429 PSLPPSAPPSLPMGAPAAPPLP--PSAPIAPPLPAGMPAAPPLPPAAPAPPPAPAPAP 484
Score = 26.6 bits (56), Expect = 4.6
Identities = 13/35 (37%), Positives = 13/35 (37%)
Frame = +3
Query: 669 PXXPXXPXXXPXXXPPXPXPXXXPXXXPPPXPAXP 773
P P P P PP P P P P PA P
Sbjct: 454 PIAPPLPAGMPAA-PPLPPAAPAPPPAPAPAPAAP 487
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 27.5 bits (58), Expect = 2.6
Identities = 10/22 (45%), Positives = 10/22 (45%)
Frame = +1
Query: 709 PPXXPXPPXPPXXXXPPXPXXP 774
PP P PP PP PP P
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPP 26
Score = 27.5 bits (58), Expect = 2.6
Identities = 10/22 (45%), Positives = 10/22 (45%)
Frame = +2
Query: 788 PXXPPXXXPPXXXXXPPXPPPP 853
P PP PP P PPPP
Sbjct: 6 PGNPPPPPPPPGFEPPSQPPPP 27
Score = 27.1 bits (57), Expect = 3.5
Identities = 12/28 (42%), Positives = 12/28 (42%)
Frame = +2
Query: 770 PPXXXXPXXPPXXXPPXXXXXPPXPPPP 853
PP P PP P PP PPPP
Sbjct: 5 PPGNPPPPPPPPGFEP--PSQPPPPPPP 30
Score = 25.8 bits (54), Expect = 8.0
Identities = 9/18 (50%), Positives = 9/18 (50%)
Frame = +3
Query: 711 PPXPXPXXXPXXXPPPXP 764
PP P P P PPP P
Sbjct: 11 PPPPPPGFEPPSQPPPPP 28
>SPCC962.06c |bpb1|sf1|zinc finger protein Bpb1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 587
Score = 25.8 bits (54), Expect = 8.0
Identities = 15/49 (30%), Positives = 15/49 (30%), Gaps = 1/49 (2%)
Frame = +1
Query: 712 PXXPXPPXPPXXXXPPXPXXPXXXXA-XXPPPXXPPXXXXXXPXPXPPP 855
P P PP PP P P PP PP P P P
Sbjct: 492 PLPPTTFAPPGVPLPPIPGAPGMPNLNMSQPPMVPPGMALPPGMPAPFP 540
>SPBC21D10.12 |hob1||BAR adaptor protein Hob1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 466
Score = 25.8 bits (54), Expect = 8.0
Identities = 12/39 (30%), Positives = 12/39 (30%)
Frame = +1
Query: 739 PXXXXPPXPXXPXXXXAXXPPPXXPPXXXXXXPXPXPPP 855
P PP P P A P P P PPP
Sbjct: 361 PQAAFPPPPVMPQPAAAAVTTPVAAPVAAAAAAVPVPPP 399
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,805,648
Number of Sequences: 5004
Number of extensions: 55794
Number of successful extensions: 441
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 144
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 287
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 432473040
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -