Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP11_F_C14
(831 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1al... 406 e-115
X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alp... 395 e-112
AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor 1-a... 288 5e-80
EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor 1-a... 255 4e-70
AF069739-1|AAC63272.2| 690|Apis mellifera translation initiatio... 38 2e-04
AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9 methylt... 24 1.5
AB253417-1|BAE86928.1| 567|Apis mellifera alpha-glucosidase pro... 23 3.5
D79208-1|BAA11466.1| 567|Apis mellifera alpha-glucosidase protein. 23 4.6
>AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1alpha
F2 protein.
Length = 461
Score = 406 bits (1000), Expect = e-115
Identities = 193/196 (98%), Positives = 193/196 (98%)
Frame = +2
Query: 110 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 289
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKIHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 290 DKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGT 469
DKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGT
Sbjct: 61 DKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGT 120
Query: 470 GEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKK 649
GEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSE RFEEIKKEVSSYIKK
Sbjct: 121 GEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSETRFEEIKKEVSSYIKK 180
Query: 650 IGYNPXAVAFVPISGW 697
IGYNP AVAFVPISGW
Sbjct: 181 IGYNPAAVAFVPISGW 196
Score = 45.2 bits (102), Expect = 7e-07
Identities = 20/31 (64%), Positives = 20/31 (64%)
Frame = +3
Query: 684 PFLDGHGDNMLEPSXXMPWFKGXQVERKXXK 776
P HGDNMLE S MPWFKG VERK K
Sbjct: 192 PISGWHGDNMLEVSSKMPWFKGWTVERKEGK 222
>X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alpha
protein.
Length = 461
Score = 395 bits (972), Expect = e-112
Identities = 187/196 (95%), Positives = 190/196 (96%)
Frame = +2
Query: 110 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 289
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKIHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 290 DKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGT 469
DKLKAERERGITIDIALWKFET+KYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAG
Sbjct: 61 DKLKAERERGITIDIALWKFETAKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGI 120
Query: 470 GEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKK 649
GEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMD T+PPYSE RFEEIKKEVSSYIKK
Sbjct: 121 GEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDMTDPPYSEARFEEIKKEVSSYIKK 180
Query: 650 IGYNPXAVAFVPISGW 697
IGYN +VAFVPISGW
Sbjct: 181 IGYNTASVAFVPISGW 196
Score = 44.8 bits (101), Expect = 1e-06
Identities = 18/28 (64%), Positives = 20/28 (71%)
Frame = +3
Query: 684 PFLDGHGDNMLEPSXXMPWFKGXQVERK 767
P HGDNMLEPS PW+KG +VERK
Sbjct: 192 PISGWHGDNMLEPSPKTPWYKGWKVERK 219
>AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor
1-alpha protein.
Length = 274
Score = 288 bits (706), Expect = 5e-80
Identities = 137/139 (98%), Positives = 137/139 (98%)
Frame = +2
Query: 281 WVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVA 460
WVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVA
Sbjct: 1 WVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVA 60
Query: 461 AGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSY 640
AGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSE RFEEIKKEVSSY
Sbjct: 61 AGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSETRFEEIKKEVSSY 120
Query: 641 IKKIGYNPXAVAFVPISGW 697
IKKIGYNP AVAFVPISGW
Sbjct: 121 IKKIGYNPAAVAFVPISGW 139
Score = 45.2 bits (102), Expect = 7e-07
Identities = 20/31 (64%), Positives = 20/31 (64%)
Frame = +3
Query: 684 PFLDGHGDNMLEPSXXMPWFKGXQVERKXXK 776
P HGDNMLE S MPWFKG VERK K
Sbjct: 135 PISGWHGDNMLEVSSKMPWFKGWTVERKEGK 165
>EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor
1-alpha protein.
Length = 172
Score = 255 bits (624), Expect = 4e-70
Identities = 121/123 (98%), Positives = 121/123 (98%)
Frame = +2
Query: 329 DIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQT 508
DIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQT
Sbjct: 1 DIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQT 60
Query: 509 REHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPXAVAFVPI 688
REHALLAFTLGVKQLIVGVNKMDSTEPPYSE RFEEIKKEVSSYIKKIGYNP AVAFVPI
Sbjct: 61 REHALLAFTLGVKQLIVGVNKMDSTEPPYSETRFEEIKKEVSSYIKKIGYNPAAVAFVPI 120
Query: 689 SGW 697
SGW
Sbjct: 121 SGW 123
Score = 45.2 bits (102), Expect = 7e-07
Identities = 20/31 (64%), Positives = 20/31 (64%)
Frame = +3
Query: 684 PFLDGHGDNMLEPSXXMPWFKGXQVERKXXK 776
P HGDNMLE S MPWFKG VERK K
Sbjct: 119 PISGWHGDNMLEVSSKMPWFKGWTVERKEGK 149
>AF069739-1|AAC63272.2| 690|Apis mellifera translation initiation
factor 2 protein.
Length = 690
Score = 37.5 bits (83), Expect = 2e-04
Identities = 36/130 (27%), Positives = 54/130 (41%)
Frame = +2
Query: 368 VTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVK 547
VT +D PGH FI G D VL+VAA G E QT + +A V
Sbjct: 195 VTFLDTPGHAAFISMRHRGAHITDIVVLVVAADDGVKE-------QTLQSIEMAKDAKV- 246
Query: 548 QLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPXAVAFVPISGWXRRQHVGAFX 727
+IV +NK+D + ++E K + I+++G V + G R+ A
Sbjct: 247 PIIVAINKIDKPNIDIIKVQYELAKHGI--VIEELGGEIQCVKISALKGINLRELTEAII 304
Query: 728 XXALVQGMXG 757
A + + G
Sbjct: 305 VQAELMDLKG 314
Score = 25.4 bits (53), Expect = 0.65
Identities = 9/18 (50%), Positives = 13/18 (72%)
Frame = +2
Query: 122 KTHINIVVIGHVDSGKST 175
K H + ++GHVD GK+T
Sbjct: 143 KRHPIVTIMGHVDHGKTT 160
>AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9
methyltransferase protein.
Length = 683
Score = 24.2 bits (50), Expect = 1.5
Identities = 11/15 (73%), Positives = 11/15 (73%)
Frame = +2
Query: 131 INIVVIGHVDSGKST 175
INI IGHV GKST
Sbjct: 43 INIGTIGHVAHGKST 57
>AB253417-1|BAE86928.1| 567|Apis mellifera alpha-glucosidase
protein.
Length = 567
Score = 23.0 bits (47), Expect = 3.5
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = +2
Query: 353 TSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI 454
T KYY D P + FIKN+ ++ +D LI
Sbjct: 294 TMKYYDYGADFPFNFAFIKNVSRDSNSSDFKKLI 327
>D79208-1|BAA11466.1| 567|Apis mellifera alpha-glucosidase protein.
Length = 567
Score = 22.6 bits (46), Expect = 4.6
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = +2
Query: 353 TSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI 454
T KYY D P + FIKN+ ++ +D L+
Sbjct: 294 TMKYYDYGADFPFNFAFIKNVSRDSNSSDFKKLV 327
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 219,010
Number of Sequences: 438
Number of extensions: 4236
Number of successful extensions: 23
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 26581563
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -