Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP11_F_C11
(879 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC32H8.12c |act1|cps8|actin |Schizosaccharomyces pombe|chr 2||... 159 4e-40
SPAC11H11.06 |arp2|SPAC22F8.01|ARP2/3 actin-organizing complex s... 97 3e-21
SPBC1347.12 |||actin-like protein Arp1 |Schizosaccharomyces pomb... 93 4e-20
SPAC630.03 |arp3|act2|actin-like protein Arp3|Schizosaccharomyce... 77 3e-15
SPBC365.10 |||actin-like protein Arp5 |Schizosaccharomyces pombe... 52 8e-08
SPAC1071.06 |arp9||SWI/SNF and RSC complex subunit Arp9|Schizosa... 47 4e-06
SPBP23A10.08 |alp5|arp4|actin-like protein Arp4|Schizosaccharomy... 46 7e-06
SPAC23D3.09 |arp42|arp4|SWI/SNF and RSC complex subunit Arp42|Sc... 39 8e-04
SPCC550.12 |arp6||actin-like protein Arp6|Schizosaccharomyces po... 35 0.013
SPAC637.12c |mst1||histone acetyltransferase Mst1|Schizosaccharo... 28 1.5
SPBC1683.03c |||membrane transporter|Schizosaccharomyces pombe|c... 27 3.5
SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase Y|Schizosacch... 26 6.1
>SPBC32H8.12c |act1|cps8|actin |Schizosaccharomyces pombe|chr
2|||Manual
Length = 375
Score = 159 bits (387), Expect = 4e-40
Identities = 69/74 (93%), Positives = 72/74 (97%)
Frame = +3
Query: 243 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHP 422
+MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGI+ NWDDMEKIWHHTFYNELRVAPEEHP
Sbjct: 43 IMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHP 102
Query: 423 VLLTEAPLNPKANR 464
LLTEAPLNPK+NR
Sbjct: 103 CLLTEAPLNPKSNR 116
Score = 148 bits (358), Expect = 1e-36
Identities = 72/85 (84%), Positives = 76/85 (89%)
Frame = +1
Query: 466 EKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALAHAIL 645
EKMTQI+FETFN+PA YVAIQAVLSLYASGRTTGIVLDSGDGV+HTVPIYEGYAL HAI+
Sbjct: 117 EKMTQIIFETFNAPAFYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAIM 176
Query: 646 RLDLAGRDLTDYLMKDPHREGVTRS 720
RLDLAGRDLTDYLMK G T S
Sbjct: 177 RLDLAGRDLTDYLMKILMERGYTFS 201
Score = 84.2 bits (199), Expect = 2e-17
Identities = 35/41 (85%), Positives = 40/41 (97%)
Frame = +2
Query: 119 DDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 241
++++AALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRH G
Sbjct: 2 EEEIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHHG 42
Score = 51.2 bits (117), Expect = 2e-07
Identities = 30/59 (50%), Positives = 37/59 (62%), Gaps = 1/59 (1%)
Frame = +3
Query: 705 RGYSFTTTAXKGIVRDIK-KNPXMSPSXXTXXGHRWRFXSLXKSYELPDGQVITSGKKR 878
RGY+F+TTA + IVRDIK K ++ + SL KSYELPDGQVIT G +R
Sbjct: 196 RGYTFSTTAEREIVRDIKEKLCYVALDFEQELQTAAQSSSLEKSYELPDGQVITIGNER 254
>SPAC11H11.06 |arp2|SPAC22F8.01|ARP2/3 actin-organizing complex
subunit Arp2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 390
Score = 97.1 bits (231), Expect = 3e-21
Identities = 46/81 (56%), Positives = 59/81 (72%)
Frame = +1
Query: 466 EKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALAHAIL 645
EKM + MFE + +YVAIQAVLSLYA G ++G+V+DSGDGV+H VP+YE L H +
Sbjct: 117 EKMCETMFERYGFGGVYVAIQAVLSLYAQGLSSGVVVDSGDGVTHIVPVYESVVLNHLVG 176
Query: 646 RLDLAGRDLTDYLMKDPHREG 708
RLD+AGRD T YL+ R+G
Sbjct: 177 RLDVAGRDATRYLISLLLRKG 197
Score = 81.0 bits (191), Expect = 2e-16
Identities = 32/67 (47%), Positives = 51/67 (76%)
Frame = +3
Query: 264 KDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAP 443
KD VGDEA++ R +L +KYP+E+GII ++++M ++W +TF+ +L++ P +LLTE P
Sbjct: 50 KDVMVGDEAEAVRSLLQVKYPMENGIIRDFEEMNQLWDYTFFEKLKIDPRGRKILLTEPP 109
Query: 444 LNPKANR 464
+NP ANR
Sbjct: 110 MNPVANR 116
Score = 46.8 bits (106), Expect = 4e-06
Identities = 20/33 (60%), Positives = 25/33 (75%)
Frame = +2
Query: 131 AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP 229
A +V+DNG+G K G+A D+ PR FPSIVGRP
Sbjct: 4 APIVLDNGTGFVKVGYAKDNFPRFQFPSIVGRP 36
Score = 32.7 bits (71), Expect = 0.071
Identities = 21/61 (34%), Positives = 32/61 (52%), Gaps = 2/61 (3%)
Frame = +3
Query: 702 RRGYSFTTTAXKGIVRDIKKNPXMSPSXXTXXGHRWRFXS--LXKSYELPDGQVITSGKK 875
R+GY+F TA VR++K+ S H+ + L ++Y LPDG+VI G +
Sbjct: 195 RKGYAFNRTADFETVREMKEK-LCYVSYDLELDHKLSEETTVLMRNYTLPDGRVIKVGSE 253
Query: 876 R 878
R
Sbjct: 254 R 254
>SPBC1347.12 |||actin-like protein Arp1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 379
Score = 93.5 bits (222), Expect = 4e-20
Identities = 40/81 (49%), Positives = 60/81 (74%)
Frame = +1
Query: 466 EKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALAHAIL 645
EK+ + +ET N PA+ ++Q VL+LYAS RTTGIVL+ GDG++H+VPIY+G+++ AI
Sbjct: 122 EKIAEYFYETLNVPALSFSLQPVLALYASARTTGIVLECGDGLTHSVPIYDGFSIPSAIQ 181
Query: 646 RLDLAGRDLTDYLMKDPHREG 708
+ ++ GRD+TDYL + G
Sbjct: 182 QEEIGGRDVTDYLQLQLRKSG 202
Score = 84.2 bits (199), Expect = 2e-17
Identities = 70/216 (32%), Positives = 97/216 (44%), Gaps = 7/216 (3%)
Frame = +3
Query: 243 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYN-ELRVAPEEH 419
VM QKD +VG EAQ+ RG+L ++ PIE GII NW DME+IW + + + +L PEEH
Sbjct: 47 VMPSSIQKDMFVGSEAQNLRGLLKIQRPIERGIIQNWSDMEEIWSYIYSDQQLNTLPEEH 106
Query: 420 PVLLTEAPLNPKANRGEDDPDHV*DLQLPR-HVRRHPGRALAVXXXXXXXXXXXXXXWCL 596
P+LLTE PL N+ + L +P P AL C
Sbjct: 107 PLLLTEPPLANIRNKEKIAEYFYETLNVPALSFSLQPVLALYASARTTGIVLE-----CG 161
Query: 597 PHRTHLRRLRSGPRHPPSGLGWSRL---DRLPHERSSPRR-GYSFTTTAXKGIVRDIKKN 764
TH + G PS + + D + + R+ G+ ++A K IVR+IK+
Sbjct: 162 DGLTHSVPIYDG-FSIPSAIQQEEIGGRDVTDYLQLQLRKSGHELVSSAEKEIVREIKEK 220
Query: 765 PXMSPSXXTXXGHRW-RFXSLXKSYELPDGQVITSG 869
S W +Y+LPD Q IT G
Sbjct: 221 CCYVASDFRSEIESWTEHKPQIHTYQLPDNQTITLG 256
Score = 52.8 bits (121), Expect = 6e-08
Identities = 21/38 (55%), Positives = 28/38 (73%)
Frame = +2
Query: 125 DVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 238
D + +DNGSG KAGFAGDD P+ +FP+ VGR +H+
Sbjct: 8 DNQPICIDNGSGFIKAGFAGDDIPKCLFPTCVGRIKHE 45
>SPAC630.03 |arp3|act2|actin-like protein Arp3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 427
Score = 77.0 bits (181), Expect = 3e-15
Identities = 40/98 (40%), Positives = 55/98 (56%), Gaps = 4/98 (4%)
Frame = +3
Query: 183 ATTRPAPSSRPSWVALATRXVMVGMGQK---DSYVGDEAQSKRGI-LTLKYPIEHGIITN 350
A++ PA SS+PS++A + D ++G++A K +L YPI HG I N
Sbjct: 42 ASSGPAVSSKPSYMASKGSGHLSSKRATEDLDFFIGNDALKKASAGYSLDYPIRHGQIEN 101
Query: 351 WDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANR 464
WD ME+ W + + LR PE+H LLTE PLNP NR
Sbjct: 102 WDHMERFWQQSLFKYLRCEPEDHYFLLTEPPLNPPENR 139
Score = 75.4 bits (177), Expect = 1e-14
Identities = 37/81 (45%), Positives = 54/81 (66%), Gaps = 8/81 (9%)
Frame = +1
Query: 466 EKMTQIMFETFNSPAMYVAIQAVLSLYASGRT--------TGIVLDSGDGVSHTVPIYEG 621
E +IMFE+FN +Y+A+QAVL+L AS + TG V+DSGDGV+H +P+ EG
Sbjct: 140 ENTAEIMFESFNCAGLYIAVQAVLALAASWTSSKVTDRSLTGTVVDSGDGVTHIIPVAEG 199
Query: 622 YALAHAILRLDLAGRDLTDYL 684
Y + +I + LAGRD+T ++
Sbjct: 200 YVIGSSIKTMPLAGRDVTYFV 220
Score = 40.7 bits (91), Expect = 3e-04
Identities = 14/28 (50%), Positives = 23/28 (82%)
Frame = +2
Query: 137 LVVDNGSGMCKAGFAGDDAPRAVFPSIV 220
+++DNG+G K G+AG+DAP VFP+++
Sbjct: 8 IIMDNGTGYSKLGYAGNDAPSYVFPTVI 35
>SPBC365.10 |||actin-like protein Arp5 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 721
Score = 52.4 bits (120), Expect = 8e-08
Identities = 23/75 (30%), Positives = 43/75 (57%), Gaps = 2/75 (2%)
Frame = +1
Query: 472 MTQIMFETFNSPAMYVAIQAVLSLYASGR--TTGIVLDSGDGVSHTVPIYEGYALAHAIL 645
MT+++FE +N+P++ I + S Y + + ++GIVL+ G+ SH +P+ G +
Sbjct: 134 MTELLFELYNAPSVAYGIDGLFSFYHNTKPSSSGIVLNLGNAASHVIPVLNGERILSEAK 193
Query: 646 RLDLAGRDLTDYLMK 690
R+ G + YL+K
Sbjct: 194 RISWGGSQSSSYLLK 208
Score = 42.7 bits (96), Expect = 7e-05
Identities = 21/67 (31%), Positives = 39/67 (58%), Gaps = 1/67 (1%)
Frame = +3
Query: 255 MGQKDSYVGDEAQSKRGILTL-KYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLL 431
+ + + VG++ + G ++ + P E +I+NWD ME++ +TF +L + EHP+ +
Sbjct: 62 LSRTSTLVGNDTLIEVGSRSIARSPFERNVISNWDLMEQVLDYTFL-KLGIDRMEHPICM 120
Query: 432 TEAPLNP 452
TE NP
Sbjct: 121 TEPLANP 127
Score = 37.5 bits (83), Expect = 0.002
Identities = 21/58 (36%), Positives = 34/58 (58%)
Frame = +2
Query: 59 AAVESIPASPTQTHTKFKMCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPR 232
A E + + PT + F+ +D+ LV+DNGS +AG+ G+ P+ VF ++V R R
Sbjct: 5 AVREPVFSGPTPS---FQNVSNDIP-LVIDNGSWQLRAGWGGEKDPKLVFDNLVSRYR 58
>SPAC1071.06 |arp9||SWI/SNF and RSC complex subunit
Arp9|Schizosaccharomyces pombe|chr 1|||Manual
Length = 523
Score = 46.8 bits (106), Expect = 4e-06
Identities = 25/73 (34%), Positives = 37/73 (50%)
Frame = +1
Query: 466 EKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALAHAIL 645
E TQ FE P +A + ++ LYA G G+V+D G + PI +G + A
Sbjct: 163 ELATQFFFEECQVPGFTIAYEPLMGLYAIGILHGLVIDIGYEKTDITPILDGQIIFTATQ 222
Query: 646 RLDLAGRDLTDYL 684
+L L GR +T +L
Sbjct: 223 QLPLGGRYMTQHL 235
>SPBP23A10.08 |alp5|arp4|actin-like protein Arp4|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 433
Score = 46.0 bits (104), Expect = 7e-06
Identities = 19/52 (36%), Positives = 29/52 (55%)
Frame = +3
Query: 309 LTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANR 464
+ +K I +G + NWD +W + +L+ P EHP+L+TE NP NR
Sbjct: 63 MEIKNAIRNGWVENWDVTVDLWRYGLEQQLKTNPLEHPILITEPFDNPPENR 114
Score = 44.0 bits (99), Expect = 3e-05
Identities = 23/72 (31%), Positives = 35/72 (48%)
Frame = +1
Query: 469 KMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALAHAILR 648
K + MFE+ PA Y+A Q + +ASG+ T ++D G S IY+G+ L
Sbjct: 116 KTLETMFESLRCPATYLAKQETCAAFASGKGTACLVDIGAERSSVSAIYDGFVLQKGYQV 175
Query: 649 LDLAGRDLTDYL 684
+G + D L
Sbjct: 176 QHFSGNAINDIL 187
Score = 41.5 bits (93), Expect = 2e-04
Identities = 23/60 (38%), Positives = 35/60 (58%), Gaps = 2/60 (3%)
Frame = +2
Query: 122 DDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGRDGR--YGPERLLRG*RGPE 295
D+V+A+V+D GS + GF+G+D P+ V PS G + DGR +G E + + G E
Sbjct: 9 DEVSAIVIDPGSKWTRIGFSGEDIPKCVLPSYCG----EFSDGRRLFGEEYIYKSNPGME 64
>SPAC23D3.09 |arp42|arp4|SWI/SNF and RSC complex subunit
Arp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 430
Score = 39.1 bits (87), Expect = 8e-04
Identities = 21/69 (30%), Positives = 36/69 (52%), Gaps = 2/69 (2%)
Frame = +3
Query: 264 KDSYVGDEAQSKRGI--LTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 437
++ YV DE Q I + +K +GII +W+ W +L+V P E+ +++TE
Sbjct: 49 RNKYVVDELQIHAPIPGMEVKNGKSNGIIQDWESTLYTWERGLKEKLQVNPTEYAMMITE 108
Query: 438 APLNPKANR 464
NP++ R
Sbjct: 109 PSWNPQSVR 117
Score = 34.3 bits (75), Expect = 0.023
Identities = 12/34 (35%), Positives = 23/34 (67%)
Frame = +2
Query: 122 DDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVG 223
+++ +LV+D GS + G+AG+++P + PS G
Sbjct: 8 EEIPSLVIDPGSCWTRFGYAGEESPMTILPSYYG 41
>SPCC550.12 |arp6||actin-like protein Arp6|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 401
Score = 35.1 bits (77), Expect = 0.013
Identities = 14/39 (35%), Positives = 25/39 (64%)
Frame = +1
Query: 568 IVLDSGDGVSHTVPIYEGYALAHAILRLDLAGRDLTDYL 684
+V+DSG +H +P+ + A+ R+D+ G+ LT+YL
Sbjct: 159 LVIDSGYSFTHIIPVIDFSVQEQAVKRVDVGGKLLTNYL 197
>SPAC637.12c |mst1||histone acetyltransferase
Mst1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 463
Score = 28.3 bits (60), Expect = 1.5
Identities = 19/64 (29%), Positives = 32/64 (50%)
Frame = +3
Query: 18 LTIGNS*DLALAVSLP*SQYQRPQHKHTQSSRCATTMLLRL*STMAPACARPVSPATTRP 197
+TI N DL+ + P + + H +SS+ + R S AP+ P +P+T +P
Sbjct: 67 ITIDNI-DLSKGIEYPPPEKPKKAHGKGKSSKRPKAVDRRR-SITAPSKTEPSTPSTEKP 124
Query: 198 APSS 209
PS+
Sbjct: 125 EPST 128
>SPBC1683.03c |||membrane transporter|Schizosaccharomyces pombe|chr
2|||Manual
Length = 519
Score = 27.1 bits (57), Expect = 3.5
Identities = 16/45 (35%), Positives = 26/45 (57%), Gaps = 4/45 (8%)
Frame = -1
Query: 702 SVRIFHEVVGQ--VATSQVQTEDGVGQSV--TFVDGYGVGDTISG 580
S+ +FHE+V T+Q+ T+ G+GQS+ + G +G T G
Sbjct: 38 SMSLFHEIVFVFIACTAQLMTQAGLGQSIAPNNIIGKSLGTTNPG 82
>SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase
Y|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1002
Score = 26.2 bits (55), Expect = 6.1
Identities = 15/38 (39%), Positives = 17/38 (44%)
Frame = -2
Query: 347 GDDTVLDGVLQSEDTSLALGLVTHVGVFLAHTDHHXPG 234
GDD+VLD V +D L L AH D H G
Sbjct: 676 GDDSVLDTVTAGKDVYAFLNLFFAKFPQYAHLDFHIAG 713
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,300,543
Number of Sequences: 5004
Number of extensions: 67396
Number of successful extensions: 234
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 200
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 229
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 440481800
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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