Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP11_F_C09
         (889 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U96491-1|AAB72148.1|  318|Drosophila melanogaster RACK1 protein.       45   2e-04
AY071661-1|AAL49283.1|  318|Drosophila melanogaster RE74715p pro...    45   2e-04
AE014134-1351|AAF52566.1|  318|Drosophila melanogaster CG7111-PA...    45   2e-04

>U96491-1|AAB72148.1|  318|Drosophila melanogaster RACK1 protein.
          Length = 318

 Score = 44.8 bits (101), Expect = 2e-04
 Identities = 22/31 (70%), Positives = 24/31 (77%)
 Frame = +2

Query: 44  ISLAWST*WTNLILLGYSDNTIRVWQVSISA 136
           +SLAWST    L   GYSDNTIRVWQVS+SA
Sbjct: 288 LSLAWSTDGQTLFA-GYSDNTIRVWQVSVSA 317


>AY071661-1|AAL49283.1|  318|Drosophila melanogaster RE74715p
           protein.
          Length = 318

 Score = 44.8 bits (101), Expect = 2e-04
 Identities = 22/31 (70%), Positives = 24/31 (77%)
 Frame = +2

Query: 44  ISLAWST*WTNLILLGYSDNTIRVWQVSISA 136
           +SLAWST    L   GYSDNTIRVWQVS+SA
Sbjct: 288 LSLAWSTDGQTLFA-GYSDNTIRVWQVSVSA 317


>AE014134-1351|AAF52566.1|  318|Drosophila melanogaster CG7111-PA
           protein.
          Length = 318

 Score = 44.8 bits (101), Expect = 2e-04
 Identities = 22/31 (70%), Positives = 24/31 (77%)
 Frame = +2

Query: 44  ISLAWST*WTNLILLGYSDNTIRVWQVSISA 136
           +SLAWST    L   GYSDNTIRVWQVS+SA
Sbjct: 288 LSLAWSTDGQTLFA-GYSDNTIRVWQVSVSA 317


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,381,937
Number of Sequences: 53049
Number of extensions: 478532
Number of successful extensions: 968
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 914
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 968
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4332305172
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)